Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0447
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...   120   4e-29
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   4.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.8  

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score =  120 bits (290), Expect = 4e-29
 Identities = 57/65 (87%), Positives = 61/65 (93%)
 Frame = +2

Query: 413 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 592
           +AVITVPAYFNDSQRQATKDAG I+GLNV+RIINEPTAAA+AYGLDK   GERNVLIFDL
Sbjct: 1   DAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLIFDL 60

Query: 593 GGGTF 607
           GGGTF
Sbjct: 61  GGGTF 65


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +1

Query: 64   NGKSTRSRNRSGYHVLLRWCLPAREGGDHR--QRPG 165
            +GK  RS +   +++LL    P REG  H+  Q PG
Sbjct: 1802 DGKYKRSYSYEPHNLLLSNLFPPREGFHHKAVQLPG 1837


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 287  GRKFEDATVQADMKHWPFEVVSSMVLTKMK 376
            GR   D TVQA   H  +   S++ L K+K
Sbjct: 2124 GRAIGDGTVQATRFHASWHAHSNLKLLKLK 2153


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 287  GRKFEDATVQADMKHWPFEVVSSMVLTKMK 376
            GR   D TVQA   H  +   S++ L K+K
Sbjct: 2125 GRAIGDGTVQATRFHASWHAHSNLKLLKLK 2154


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 806,378
Number of Sequences: 2352
Number of extensions: 17957
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)