Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0444
         (450 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5KRE9 Cluster: Putative uncharacterized protein; n=1; ...    32   6.6  
UniRef50_UPI0000E4998E Cluster: PREDICTED: hypothetical protein;...    31   8.8  
UniRef50_Q640T5 Cluster: Tyrosine-protein kinase receptor; n=2; ...    31   8.8  
UniRef50_Q9NL63 Cluster: Haustellum specific protein A; n=1; Sar...    31   8.8  
UniRef50_Q6TRZ7 Cluster: Putative salivary C-type lectin; n=1; C...    31   8.8  

>UniRef50_A5KRE9 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus torques ATCC 27756|Rep: Putative
           uncharacterized protein - Ruminococcus torques ATCC
           27756
          Length = 78

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
 Frame = +3

Query: 165 LDGVQYFISRMNPYSPELNYFLSYQYCR-SLSLQLAS--FETKGESRFR 302
           L  ++ F+ R N ++  +NY LS+Q+ + +L+L L S    TK  S FR
Sbjct: 19  LSKIKIFVKRYNDFALSINYLLSFQWIKDNLTLVLGSVTITTKTASPFR 67


>UniRef50_UPI0000E4998E Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 298

 Score = 31.5 bits (68), Expect = 8.8
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +3

Query: 204 YSPELNYFLSYQYCRSLSLQLASFETKGESRFRXRLILTN 323
           +SP++N+  ++  C+ L   L S   + E+ F   LILT+
Sbjct: 42  FSPKVNWQTAHDACQDLGADLVSIHDEAENAFAFALILTD 81


>UniRef50_Q640T5 Cluster: Tyrosine-protein kinase receptor; n=2;
           Xenopus tropicalis|Rep: Tyrosine-protein kinase receptor
           - Xenopus tropicalis (Western clawed frog) (Silurana
           tropicalis)
          Length = 935

 Score = 31.5 bits (68), Expect = 8.8
 Identities = 14/19 (73%), Positives = 14/19 (73%)
 Frame = +1

Query: 1   PVLRERTPACDYTYTNFTR 57
           PVLR  TPA DYT TN TR
Sbjct: 229 PVLRWETPATDYTVTNTTR 247


>UniRef50_Q9NL63 Cluster: Haustellum specific protein A; n=1;
           Sarcophaga peregrina|Rep: Haustellum specific protein A
           - Sarcophaga peregrina (Flesh fly) (Boettcherisca
           peregrina)
          Length = 168

 Score = 31.5 bits (68), Expect = 8.8
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +3

Query: 213 ELNYFLSYQYCRSLSLQLASFETKGESRFRXRLILTNAXL*QI*TFWTSGXXL 371
           +LN+  +YQ C  L + LAS E++ E++     + + + L     FW SG  L
Sbjct: 42  KLNWHKAYQACAKLGMSLASIESETENKSLKDYLYSQSILAN--QFWLSGTNL 92


>UniRef50_Q6TRZ7 Cluster: Putative salivary C-type lectin; n=1;
           Culex pipiens quinquefasciatus|Rep: Putative salivary
           C-type lectin - Culex quinquefasciatus (Southern house
           mosquito)
          Length = 183

 Score = 31.5 bits (68), Expect = 8.8
 Identities = 19/55 (34%), Positives = 29/55 (52%)
 Frame = +3

Query: 207 SPELNYFLSYQYCRSLSLQLASFETKGESRFRXRLILTNAXL*QI*TFWTSGXXL 371
           S E+++F ++  C S+ L+LAS  T  E     +L L  A   QI  +W +G  L
Sbjct: 60  SREVDFFQAWHLCASIGLRLASVNT-AEDDAALKLALRAADSNQIGPWWIAGTDL 113


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,399,105
Number of Sequences: 1657284
Number of extensions: 6364910
Number of successful extensions: 13535
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13534
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)