Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0442
(750 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A5A7A5 Cluster: Farnesyl diphosphate synthase 2; n=1; B... 366 e-100
UniRef50_Q1XAB1 Cluster: Farnesyl diphosphate synthase-like prot... 158 1e-37
UniRef50_A5A7A6 Cluster: Farnesyl diphosphate synthase 3; n=1; B... 150 4e-35
UniRef50_Q09152 Cluster: Farnesyl pyrophosphate synthetase 1, mi... 110 4e-23
UniRef50_Q7KN61 Cluster: GM06581p; n=6; Endopterygota|Rep: GM065... 107 2e-22
UniRef50_P0C565 Cluster: Chrysanthemyl diphosphate synthase, chl... 106 5e-22
UniRef50_Q56CY8 Cluster: Farnesyl diphosphate synthase; n=16; Ne... 104 2e-21
UniRef50_P14324 Cluster: Farnesyl pyrophosphate synthetase (FPP ... 102 1e-20
UniRef50_Q01KM5 Cluster: OSIGBa0158D24.4 protein; n=4; Oryza sat... 100 3e-20
UniRef50_P08836 Cluster: Farnesyl pyrophosphate synthetase (FPP ... 99 1e-19
UniRef50_A4RUB9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 98 2e-19
UniRef50_Q58GE8 Cluster: Geranyl diphosphate synthase; n=1; Ips ... 93 7e-18
UniRef50_P08524 Cluster: Farnesyl pyrophosphate synthetase (FPP ... 91 4e-17
UniRef50_Q7FAL6 Cluster: OSJNBa0071I13.18 protein; n=6; Magnolio... 87 4e-16
UniRef50_A5DDW6 Cluster: Putative uncharacterized protein; n=1; ... 85 2e-15
UniRef50_Q54XP0 Cluster: Farnesyl diphosphate synthase; n=3; Dic... 84 3e-15
UniRef50_A2R6Y8 Cluster: Contig An16c0060, complete genome; n=1;... 84 4e-15
UniRef50_Q75ND9 Cluster: Farnesyl diphosphate synthase; n=5; Dik... 82 1e-14
UniRef50_Q4RID2 Cluster: Chromosome 8 SCAF15044, whole genome sh... 79 9e-14
UniRef50_A5K4U6 Cluster: Farnesyl pyrophosphate synthase, putati... 77 6e-13
UniRef50_Q4QBL1 Cluster: Farnesyl pyrophosphate synthase, putati... 75 1e-12
UniRef50_Q0CIT1 Cluster: Putative uncharacterized protein; n=1; ... 75 2e-12
UniRef50_Q5DC19 Cluster: SJCHGC02430 protein; n=1; Schistosoma j... 73 8e-12
UniRef50_UPI0000DB7C0D Cluster: PREDICTED: similar to Farnesyl p... 72 2e-11
UniRef50_A2E130 Cluster: Polyprenyl synthetase family protein; n... 66 7e-10
UniRef50_O62336 Cluster: Putative uncharacterized protein; n=2; ... 66 9e-10
UniRef50_UPI00005A15CB Cluster: PREDICTED: similar to Farnesyl p... 66 1e-09
UniRef50_Q197X6 Cluster: Farnesyl diphosphate synthase; n=2; Tox... 65 2e-09
UniRef50_UPI00005A125B Cluster: PREDICTED: similar to Farnesyl p... 64 5e-09
UniRef50_A2ZWU6 Cluster: Putative uncharacterized protein; n=2; ... 61 3e-08
UniRef50_Q4UAU6 Cluster: Farnesyl pyrophosphate synthetase, puta... 58 2e-07
UniRef50_O59703 Cluster: Farnesyl pyrophosphate synthetase; n=1;... 58 3e-07
UniRef50_Q5CLA5 Cluster: Farnesyl pyrophosphate synthase; n=3; C... 56 9e-07
UniRef50_A7AX33 Cluster: Farnesyl pyrophosphate synthetase , put... 55 2e-06
UniRef50_Q8SQS0 Cluster: FARNESYL PYROPHOSPHATE SYNTHETASE; n=1;... 54 5e-06
UniRef50_A2EN50 Cluster: Polyprenyl synthetase family protein; n... 53 9e-06
UniRef50_Q55EU7 Cluster: Putative uncharacterized protein; n=1; ... 51 3e-05
UniRef50_Q7R2I4 Cluster: GLP_623_14387_13164; n=1; Giardia lambl... 47 6e-04
UniRef50_UPI000038E5D8 Cluster: hypothetical protein Faci_030012... 46 0.001
UniRef50_Q0JWJ4 Cluster: Putative geranylgeranyl diphosphate syn... 43 0.007
UniRef50_A1R1M5 Cluster: Putative geranylgeranyl pyrophosphate s... 42 0.021
UniRef50_Q79ZL1 Cluster: Polyprenyl diphosphate synthase; n=4; S... 41 0.028
UniRef50_Q9RVU0 Cluster: Polyprenyl synthase; n=4; Deinococci|Re... 40 0.065
UniRef50_Q97C41 Cluster: Farnesyl pyrophosphate synthase; n=3; T... 40 0.086
UniRef50_Q8NT37 Cluster: Geranylgeranyl pyrophosphate synthase; ... 39 0.11
UniRef50_Q3SAB7 Cluster: Geranylgeranyl pyrophosphate synthase; ... 39 0.11
UniRef50_UPI0000DB7AE1 Cluster: PREDICTED: hypothetical protein;... 39 0.15
UniRef50_A3TKC8 Cluster: Putative polyprenyl synthase / dimethyl... 39 0.15
UniRef50_Q5KSN3 Cluster: Geranylgeranyl diphosphate synthase; n=... 38 0.20
UniRef50_P54383 Cluster: Geranyltranstransferase; n=27; Bacteria... 38 0.20
UniRef50_A7BDF8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.26
UniRef50_A2SRA1 Cluster: Polyprenyl synthetase; n=3; Methanomicr... 38 0.26
UniRef50_Q5JWR5 Cluster: Protein dopey-1; n=25; Deuterostomia|Re... 38 0.26
UniRef50_A0JV81 Cluster: Polyprenyl synthetase; n=2; Actinomycet... 38 0.35
UniRef50_Q4AET3 Cluster: Farnesyltranstransferase; n=1; Chlorobi... 37 0.61
UniRef50_A6C8V0 Cluster: Polyprenyl synthetase; n=1; Planctomyce... 37 0.61
UniRef50_A3CXK9 Cluster: Polyprenyl synthetase; n=1; Methanocull... 37 0.61
UniRef50_Q58270 Cluster: Bifunctional short chain isoprenyl diph... 37 0.61
UniRef50_P74906 Cluster: Geranylgeranyl diphosphate synthetase; ... 36 0.81
UniRef50_Q64BF4 Cluster: Bifunctional short chain isoprenyl diph... 36 0.81
UniRef50_Q83N10 Cluster: Geranylgeranyl pyrophosphate synthase; ... 36 1.1
UniRef50_Q0SF88 Cluster: Polyprenyl synthetase; n=17; Actinomyce... 36 1.1
UniRef50_A2RHR5 Cluster: Prenyl transferase; n=3; Lactococcus la... 36 1.1
UniRef50_Q4SSX9 Cluster: Chromosome 8 SCAF14344, whole genome sh... 36 1.4
UniRef50_Q6AE53 Cluster: Geranylgeranyl pyrophosphate synthase; ... 35 1.9
UniRef50_Q54193 Cluster: Geranylgeranyl pyrophosphate synthase; ... 35 1.9
UniRef50_Q1V225 Cluster: Octaprenyl-diphosphate synthase; n=3; B... 35 1.9
UniRef50_A3HX57 Cluster: Putative isoprenoid biosynthesis relate... 35 1.9
UniRef50_A1R5E5 Cluster: Putative polyprenyl synthetase; n=1; Ar... 35 1.9
UniRef50_A0CE39 Cluster: Chromosome undetermined scaffold_17, wh... 35 1.9
UniRef50_A5DBM0 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_Q9V077 Cluster: IdsA-like multifunctional short chain i... 35 1.9
UniRef50_Q9HQI3 Cluster: Geranylgeranyl diphosphate synthase; n=... 35 1.9
UniRef50_A7DRA7 Cluster: Polyprenyl synthetase; n=1; Candidatus ... 35 1.9
UniRef50_Q9RIY0 Cluster: Putative geranylgeranyl pyrophosphate s... 35 2.5
UniRef50_O05708 Cluster: Octaprenyl-diphosphate synthase; n=1; T... 35 2.5
UniRef50_A6LMQ9 Cluster: Polyprenyl synthetase; n=1; Thermosipho... 35 2.5
UniRef50_A1SLA1 Cluster: Polyprenyl synthetase; n=1; Nocardioide... 35 2.5
UniRef50_A3DLU2 Cluster: Polyprenyl synthetase; n=1; Staphylothe... 35 2.5
UniRef50_UPI0000499D14 Cluster: hypothetical protein 73.t00020; ... 34 3.3
UniRef50_Q8NNM1 Cluster: Geranylgeranyl pyrophosphate synthase; ... 34 3.3
UniRef50_Q8G4G0 Cluster: Probably bifunctional short chain isopr... 34 3.3
UniRef50_Q82P04 Cluster: Putative polyprenyl diphosphate synthas... 34 3.3
UniRef50_Q3ACT5 Cluster: Heptaprenyl diphosphate synthase compon... 34 3.3
UniRef50_Q2JD77 Cluster: Polyprenyl synthetase; n=2; Frankia|Rep... 34 3.3
UniRef50_Q4W8B2 Cluster: GGPP synthase; n=2; Brevundimonas|Rep: ... 34 3.3
UniRef50_Q2I775 Cluster: PlaT4; n=1; Streptomyces sp. Tu6071|Rep... 34 3.3
UniRef50_A4EBW4 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_Q9YB31 Cluster: Farnesylgeranyl diphosphate synthase; n... 34 3.3
UniRef50_Q8UBX7 Cluster: Geranyltranstransferase; n=4; Rhizobium... 34 4.3
UniRef50_Q5YXP1 Cluster: Polyprenyl synthase; n=1; Nocardia farc... 34 4.3
UniRef50_A3GFK9 Cluster: Predicted protein; n=3; Saccharomycetal... 34 4.3
UniRef50_UPI0001509DE7 Cluster: hypothetical protein TTHERM_0028... 33 5.7
UniRef50_Q2RM43 Cluster: Polyprenyl synthetase; n=1; Moorella th... 33 5.7
UniRef50_Q0UDQ3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_A6UNE4 Cluster: ATPase; n=1; Methanococcus vannielii SB... 33 5.7
UniRef50_Q9RUJ1 Cluster: Geranylgeranyl diphosphate synthase; n=... 33 7.5
UniRef50_Q9S5E9 Cluster: SelF-HepPS; n=1; Synechococcus elongatu... 33 7.5
UniRef50_A5PJD2 Cluster: MGC152321 protein; n=6; Eutheria|Rep: M... 33 7.5
UniRef50_Q31Q84 Cluster: Phage late control gene D protein GPD; ... 33 9.9
UniRef50_Q0C4D6 Cluster: Polyprenyl synthetase; n=4; Alphaproteo... 33 9.9
UniRef50_A7HJU8 Cluster: Polyprenyl synthetase; n=1; Fervidobact... 33 9.9
UniRef50_Q8ZXZ8 Cluster: Polyprenyl synthetase; n=6; Thermoprote... 33 9.9
UniRef50_A7IAG2 Cluster: Farnesyltranstransferase; n=1; Candidat... 33 9.9
UniRef50_A7DRD5 Cluster: Polyprenyl synthetase; n=1; Candidatus ... 33 9.9
UniRef50_A0RY19 Cluster: Geranylgeranyl pyrophosphate synthase/g... 33 9.9
>UniRef50_A5A7A5 Cluster: Farnesyl diphosphate synthase 2; n=1;
Bombyx mori|Rep: Farnesyl diphosphate synthase 2 -
Bombyx mori (Silk moth)
Length = 382
Score = 366 bits (901), Expect = e-100
Identities = 169/176 (96%), Positives = 169/176 (96%)
Frame = +3
Query: 132 MSVFNCLKFTRKVTYKYWPQLIRYKNNSAXMTTASKNLEIINEKKMFDDLLPEVIMTLQN 311
MSVFNCLKFTRKVTYKYWPQLIRYKNNSA MTTASKNLEIINEKKMFDDLLPEVIMTLQN
Sbjct: 1 MSVFNCLKFTRKVTYKYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQN 60
Query: 312 KSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWC 491
KSKLSEVPQIGDWLKKMLHYNLVGGKHTR ITTVI YKTIEKPEKVTEHTLKMACKLGWC
Sbjct: 61 KSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWC 120
Query: 492 VEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLXIHSXLXEFLKTN 659
VEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITC FNDSL IHS L EFLKTN
Sbjct: 121 VEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTN 176
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 686 KWFELFNEXLWRTSMGQHLNH 748
K FELFNE LWRTSMGQHL+H
Sbjct: 185 KMFELFNETLWRTSMGQHLDH 205
>UniRef50_Q1XAB1 Cluster: Farnesyl diphosphate synthase-like
protein; n=2; Choristoneura fumiferana|Rep: Farnesyl
diphosphate synthase-like protein - Choristoneura
fumiferana (Spruce budworm)
Length = 397
Score = 158 bits (384), Expect = 1e-37
Identities = 68/144 (47%), Positives = 101/144 (70%)
Frame = +3
Query: 258 EKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXYKTIEK 437
+K+ F+D+LP ++ T+ S+L+EVP++ +WLKK+L YNL GGK R +TT+ Y+ +EK
Sbjct: 58 KKESFEDVLPSILNTITTNSELTEVPEVANWLKKVLEYNLAGGKKARGLTTLFAYEMLEK 117
Query: 438 PEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDS 617
PE +TE T+ +A LGWCVE+ Q + ++LDDIMDGS+ RRG+PCWY+ PEVG+ NDS
Sbjct: 118 PENITEETIYLAKTLGWCVEILQGFLVMLDDIMDGSTTRRGVPCWYQLPEVGLAA-VNDS 176
Query: 618 LXIHSXLXEFLKTNXXDQS*LYEN 689
+ S + L + D+ +Y N
Sbjct: 177 SLMFSSIFYVLHAHFADKK-IYTN 199
>UniRef50_A5A7A6 Cluster: Farnesyl diphosphate synthase 3; n=1;
Bombyx mori|Rep: Farnesyl diphosphate synthase 3 -
Bombyx mori (Silk moth)
Length = 385
Score = 150 bits (363), Expect = 4e-35
Identities = 65/136 (47%), Positives = 91/136 (66%)
Frame = +3
Query: 246 EIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXYK 425
+I E++ F D +I L K +++P++G W+KK+L YN+ GGK R ITTV+ Y+
Sbjct: 42 QIAKERETFQDAWKGIIDNLTTNKKFTQLPELGSWVKKVLEYNVKGGKKIRGITTVLAYE 101
Query: 426 TIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCX 605
EKPE VTE +++A GWC EM QAY I+ DDIMDGSS RRG+PCWYR P+VG+
Sbjct: 102 LFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGA- 160
Query: 606 FNDSLXIHSXLXEFLK 653
ND++ ++ + E LK
Sbjct: 161 INDAILVYGSIYEILK 176
>UniRef50_Q09152 Cluster: Farnesyl pyrophosphate synthetase 1,
mitochondrial precursor (FPP synthetase 1) (FPS 1)
(Farnesyl diphosphate synthetase 1) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=61;
Spermatophyta|Rep: Farnesyl pyrophosphate synthetase 1,
mitochondrial precursor (FPP synthetase 1) (FPS 1)
(Farnesyl diphosphate synthetase 1) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] - Arabidopsis
thaliana (Mouse-ear cress)
Length = 384
Score = 110 bits (264), Expect = 4e-23
Identities = 57/160 (35%), Positives = 89/160 (55%)
Frame = +3
Query: 192 LIRYKNNSAXMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHY 371
L R + S+ M T K+ + + DLL + N+S+L W+ +ML Y
Sbjct: 32 LYRRRIQSSSMETDLKSTFLNVYSVLKSDLLHDPSFEFTNESRL--------WVDRMLDY 83
Query: 372 NLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSV 551
N+ GGK R ++ V +K +++ +TE + ++C LGWC+E QAY +VLDDIMD S
Sbjct: 84 NVRGGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDIMDNSVT 143
Query: 552 RRGMPCWYRRPEVGITCXFNDSLXIHSXLXEFLKTNXXDQ 671
RRG PCW+R P+VG+ ND + + + + LK + D+
Sbjct: 144 RRGQPCWFRVPQVGMVA-INDGILLRNHIHRILKKHFRDK 182
>UniRef50_Q7KN61 Cluster: GM06581p; n=6; Endopterygota|Rep: GM06581p
- Drosophila melanogaster (Fruit fly)
Length = 419
Score = 107 bits (258), Expect = 2e-22
Identities = 48/133 (36%), Positives = 76/133 (57%)
Frame = +3
Query: 255 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXYKTIE 434
+E + F + P+++ + +K W ++L YN+ GK R I TV+ YK +
Sbjct: 82 DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 141
Query: 435 KPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFND 614
+ +T +K+A LGWCVEM Q++ I+ DD+MD S+ RRG PCW++ VG+T ND
Sbjct: 142 PTQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLTA-IND 200
Query: 615 SLXIHSXLXEFLK 653
+L I + + LK
Sbjct: 201 ALMIENAMYAILK 213
>UniRef50_P0C565 Cluster: Chrysanthemyl diphosphate synthase,
chloroplast precursor; n=2; Anthemideae|Rep:
Chrysanthemyl diphosphate synthase, chloroplast
precursor - Tanacetum cinerariifolium (Dalmatian daisy)
(Chrysanthemumcinerariifolium)
Length = 395
Score = 106 bits (255), Expect = 5e-22
Identities = 47/102 (46%), Positives = 66/102 (64%)
Frame = +3
Query: 348 WLKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLD 527
W+++M+ YN+ GGK R + V Y+ + K E++TE +AC LGWC E QA+ +VLD
Sbjct: 88 WVERMIDYNVPGGKMVRGYSVVDSYQLL-KGEELTEDEAFLACALGWCTEWLQAFILVLD 146
Query: 528 DIMDGSSVRRGMPCWYRRPEVGITCXFNDSLXIHSXLXEFLK 653
DIMDGS RRG PCW+R PEVG+ ND + + + + LK
Sbjct: 147 DIMDGSHTRRGQPCWFRLPEVGVVA-INDGVLLRNHVHRILK 187
>UniRef50_Q56CY8 Cluster: Farnesyl diphosphate synthase; n=16;
Neoptera|Rep: Farnesyl diphosphate synthase - Anthonomus
grandis (Boll weevil)
Length = 438
Score = 104 bits (250), Expect = 2e-21
Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 8/180 (4%)
Frame = +3
Query: 153 KFTRKVTYKYWPQLIRYKNNSAXMT--------TASKNLEIINEKKMFDDLLPEVIMTLQ 308
++ V K W + +++ N A T + S L + + F L P+++ L
Sbjct: 55 QYHTNVNNKRWHKQMQFNNLRALSTIQQTIPKPSHSSTLVSKEQSRDFMALFPDLVRELT 114
Query: 309 NKSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGW 488
+ E+P + + ++L YN+ GK R + + YK +E P+ +T +K+A LGW
Sbjct: 115 ELGRNPELPDVMRRVARVLQYNVPNGKKNRGLILISAYKMLEDPKNLTPENIKLASVLGW 174
Query: 489 CVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLXIHSXLXEFLKTNXXD 668
C+EM + +VLDDIMD S RRG CWYR+ +G++ ND L + + + LK + D
Sbjct: 175 CLEMIHSCFLVLDDIMDNSETRRGSLCWYRQNGIGLSA-INDGLILENAVYTLLKMHLRD 233
>UniRef50_P14324 Cluster: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=44;
Eukaryota|Rep: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] - Homo sapiens
(Human)
Length = 353
Score = 102 bits (244), Expect = 1e-20
Identities = 47/116 (40%), Positives = 72/116 (62%), Gaps = 3/116 (2%)
Frame = +3
Query: 333 PQIGDW---LKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMF 503
P+IGD LK++L YN +GGK+ R +T V+ ++ + +P K +L+ A +GWCVE+
Sbjct: 36 PEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELL 95
Query: 504 QAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLXIHSXLXEFLKTNXXDQ 671
QA+ +V DDIMD S RRG CWY++P VG+ ND+ + + + LK +Q
Sbjct: 96 QAFFLVADDIMDSSLTRRGQICWYQKPGVGLDA-INDANLLEACIYRLLKLYCREQ 150
>UniRef50_Q01KM5 Cluster: OSIGBa0158D24.4 protein; n=4; Oryza
sativa|Rep: OSIGBa0158D24.4 protein - Oryza sativa
(Rice)
Length = 392
Score = 100 bits (240), Expect = 3e-20
Identities = 45/102 (44%), Positives = 63/102 (61%)
Frame = +3
Query: 348 WLKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLD 527
WL +M+ YN+ GGK R ++ + Y +++ +VTE +AC LGWCVE FQA ++LD
Sbjct: 84 WLAQMIDYNVPGGKLNRGLSVIDSYLLLKQGSEVTEDDFFLACVLGWCVEWFQACALLLD 143
Query: 528 DIMDGSSVRRGMPCWYRRPEVGITCXFNDSLXIHSXLXEFLK 653
DIMD S RR CWYRRPEVG+ ND + + + +K
Sbjct: 144 DIMDDSHTRRDQICWYRRPEVGLR-GINDGIILKCHILIMIK 184
>UniRef50_P08836 Cluster: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=16;
Fungi/Metazoa group|Rep: Farnesyl pyrophosphate
synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate
synthetase) [Includes: Dimethylallyltranstransferase (EC
2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] -
Gallus gallus (Chicken)
Length = 367
Score = 99.1 bits (236), Expect = 1e-19
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
Frame = +3
Query: 210 NSAXMTTASKNLEII---NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDW---LKKMLHY 371
N+ A +NL + E++ F P+++ L + + P++GD LK++L Y
Sbjct: 8 NAKFQQPALRNLSPVVVEREREEFVGFFPQIVRDL-TEDGIGH-PEVGDAVARLKEVLQY 65
Query: 372 NLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSV 551
N GGK R +T V Y+ + P + +L+ A +GWC+E+FQA+ +V DDIMD S
Sbjct: 66 NAPGGKCNRGLTVVAAYRELSGPGQKDAESLRCALAVGWCIELFQAFFLVADDIMDQSLT 125
Query: 552 RRGMPCWYRRPEVGITCXFNDSLXIHSXLXEFLK 653
RRG CWY++ VG+ NDS + S + LK
Sbjct: 126 RRGQLCWYKKEGVGLDA-INDSFLLESSVYRVLK 158
>UniRef50_A4RUB9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 348
Score = 97.9 bits (233), Expect = 2e-19
Identities = 46/105 (43%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
Frame = +3
Query: 345 DWLKKMLHYNLVGGKHTRXITTVIXYKTIE--KPEKVTEHTLKMACKLGWCVEMFQAYCI 518
+W+K+M+ YN+ GK R + V + ++ K E V E LK A +GWC+E QAY +
Sbjct: 37 EWIKRMIDYNVPHGKLNRGLAVVDGVRALKAAKNETVDEEELKRAMVVGWCIEFLQAYFL 96
Query: 519 VLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLXIHSXLXEFLK 653
V DDIMD S RRG PCWYR+P+V +T ND + + L + LK
Sbjct: 97 VADDIMDESVTRRGQPCWYRQPDVKMTA-INDGILLEMMLYKCLK 140
>UniRef50_Q58GE8 Cluster: Geranyl diphosphate synthase; n=1; Ips
pini|Rep: Geranyl diphosphate synthase - Ips pini (Pine
engraver beetle)
Length = 416
Score = 93.1 bits (221), Expect = 7e-18
Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 6/159 (3%)
Frame = +3
Query: 195 IRYKN-NSAXMTTASKNLEIINEK-----KMFDDLLPEVIMTLQNKSKLSEVPQIGDWLK 356
IR+K+ +SA ++ SK++ NE+ K D++ PEV+ ++ + E+ I L+
Sbjct: 41 IRHKSRSSAVPSSLSKSMYDHNEEMKAAMKYMDEIYPEVMGQIEKVPQYEEIKPILVRLR 100
Query: 357 KMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIM 536
+ + Y + GK + + V +K + P+ +T +K++ LGWC E+ QAY +LDDIM
Sbjct: 101 EAIDYTVPYGKRFKGVHIVSHFKLLADPKFITPENVKLSGVLGWCAEIIQAYFCMLDDIM 160
Query: 537 DGSSVRRGMPCWYRRPEVGITCXFNDSLXIHSXLXEFLK 653
D S RRG P WY+ P +G+ D + E LK
Sbjct: 161 DDSDTRRGKPTWYKLPGIGLNA-VTDVCLMEMFTFELLK 198
>UniRef50_P08524 Cluster: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=32; Fungi|Rep:
Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)
(Farnesyl diphosphate synthetase) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] - Saccharomyces
cerevisiae (Baker's yeast)
Length = 352
Score = 90.6 bits (215), Expect = 4e-17
Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Frame = +3
Query: 261 KKMFDDLLPEVIMTLQNKSKLSEVPQIG-DWLKKMLHYNLVGGKHTRXITTVIXYKTIEK 437
++ F ++ P+++ L +P+ DW L+YN GGK R ++ V Y +
Sbjct: 9 RERFLNVFPKLVEELNASLLAYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSN 68
Query: 438 P--EKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFN 611
E++ + + LGWC+E+ QAY +V DD+MD S RRG PCWY+ PEVG N
Sbjct: 69 KTVEQLGQEEYEKVAILGWCIELLQAYFLVADDMMDKSITRRGQPCWYKVPEVG-EIAIN 127
Query: 612 DSLXIHSXLXEFLKTNXXDQ 671
D+ + + + + LK++ ++
Sbjct: 128 DAFMLEAAIYKLLKSHFRNE 147
>UniRef50_Q7FAL6 Cluster: OSJNBa0071I13.18 protein; n=6;
Magnoliophyta|Rep: OSJNBa0071I13.18 protein - Oryza
sativa subsp. japonica (Rice)
Length = 407
Score = 87.0 bits (206), Expect = 4e-16
Identities = 39/102 (38%), Positives = 58/102 (56%)
Frame = +3
Query: 348 WLKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLD 527
W+ KM+ YN+ GGK R ++ V Y + + +V + +AC LGWCVE QA +VLD
Sbjct: 99 WVAKMMDYNVPGGKLNRGLSVVDSYMLLRQGTEVDDEDFYLACVLGWCVEWLQASALVLD 158
Query: 528 DIMDGSSVRRGMPCWYRRPEVGITCXFNDSLXIHSXLXEFLK 653
DI D + RR CWY+ P VG++ ND + + + +K
Sbjct: 159 DITDNAYTRRDNLCWYKLPTVGMSA-INDGVLLKCHVQAIIK 199
>UniRef50_A5DDW6 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 388
Score = 84.6 bits (200), Expect = 2e-15
Identities = 48/116 (41%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Frame = +3
Query: 318 KLSEVPQIG-DWLKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTE---HTLKMACKLG 485
KL +P+ W YN+ GGK R ++ V Y I K +KV E LK LG
Sbjct: 65 KLYSMPEEAIKWFSDSFSYNVPGGKLNRGLSVVDTY-AILKGKKVNELESDELKKVTILG 123
Query: 486 WCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLXIHSXLXEFLK 653
WCVEM QA+ +V DDIMD + RRG PCWY++ VG+ NDS + + LK
Sbjct: 124 WCVEMLQAFFLVADDIMDKAEKRRGHPCWYKKDGVGLIA-INDSFVLEGAIYVVLK 178
>UniRef50_Q54XP0 Cluster: Farnesyl diphosphate synthase; n=3;
Dictyostelium discoideum|Rep: Farnesyl diphosphate
synthase - Dictyostelium discoideum AX4
Length = 382
Score = 84.2 bits (199), Expect = 3e-15
Identities = 44/129 (34%), Positives = 72/129 (55%)
Frame = +3
Query: 195 IRYKNNSAXMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYN 374
+ SA + TA + E+ + ++F L E++ L + PQ W++KM++ N
Sbjct: 22 LNMNQTSAPIKTAKE--ELADFVEIFPILTNEILKELPG---MDMPPQTIAWVEKMINVN 76
Query: 375 LVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVR 554
+ GGK R +T + + + + +++ + +A LGWCVE QA+ +V DDIMD S R
Sbjct: 77 VSGGKMNRGLTVLHSLQLLVEGRQLSRSEIFLANVLGWCVEWLQAFFLVADDIMDQSITR 136
Query: 555 RGMPCWYRR 581
RG PCWYR+
Sbjct: 137 RGQPCWYRQ 145
>UniRef50_A2R6Y8 Cluster: Contig An16c0060, complete genome; n=1;
Aspergillus niger|Rep: Contig An16c0060, complete genome
- Aspergillus niger
Length = 349
Score = 83.8 bits (198), Expect = 4e-15
Identities = 47/134 (35%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Frame = +3
Query: 258 EKKMFDDLLPEVIMTLQNKSKLSEVPQ-IGDWLKKMLHYNLVGGKHTRXITTV-IXYKTI 431
++ FD +L E++ + + PQ + ++++K + N GK R ++ +
Sbjct: 6 DRSKFDGVLAELVADVLEHFASNGAPQEVKNYVEKCFYENSTNGKMLRGLSVPQTGLSIL 65
Query: 432 EKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFN 611
+P VTE C LGW VE+ QAY + DDIMD SS RRG PCWYR P VG+ N
Sbjct: 66 GRP--VTEQEYHDLCVLGWLVELLQAYLLTHDDIMDNSSTRRGKPCWYRLPSVGMKA-VN 122
Query: 612 DSLXIHSXLXEFLK 653
D + S + LK
Sbjct: 123 DGSLLRSSIFFLLK 136
>UniRef50_Q75ND9 Cluster: Farnesyl diphosphate synthase; n=5;
Dikarya|Rep: Farnesyl diphosphate synthase - Lactarius
chrysorrheus (Yellowdrop milkcap) (Agaricus theiogalus)
Length = 381
Score = 82.2 bits (194), Expect = 1e-14
Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 1/150 (0%)
Frame = +3
Query: 207 NNSAXMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIG-DWLKKMLHYNLVG 383
++SA + A+ + +K F+ + V L + +P+ ++ ++ + YN+ G
Sbjct: 10 SSSAPLPPAAAKDKKAAARKRFEGVYAVVRDDLLEDFRKHNMPEEAIEYYQRSMDYNVPG 69
Query: 384 GKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGM 563
GK R ++ V+ I K ++TE A LGW VE QAY +V DDIMD S RRG
Sbjct: 70 GKLNRGMS-VVDSVAILKGRELTESEYFQAAVLGWAVEWMQAYFLVSDDIMDASITRRGQ 128
Query: 564 PCWYRRPEVGITCXFNDSLXIHSXLXEFLK 653
PCWYR VG ND+L + + + ++
Sbjct: 129 PCWYRTEGVGFMA-INDALILEGAIFQMIR 157
>UniRef50_Q4RID2 Cluster: Chromosome 8 SCAF15044, whole genome
shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 8
SCAF15044, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 402
Score = 79.4 bits (187), Expect = 9e-14
Identities = 30/75 (40%), Positives = 50/75 (66%)
Frame = +3
Query: 357 KMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIM 536
++L YN+ GGK R ++ + + + P ++T+ ++ A +GWC+E+ QA+ +V DDIM
Sbjct: 68 QVLMYNVPGGKRNRGLSVIGSLRELLPPSELTQDLVQRALLVGWCIELLQAFFLVADDIM 127
Query: 537 DGSSVRRGMPCWYRR 581
D S RRG PCWY++
Sbjct: 128 DASVTRRGQPCWYKK 142
>UniRef50_A5K4U6 Cluster: Farnesyl pyrophosphate synthase, putative;
n=7; Plasmodium|Rep: Farnesyl pyrophosphate synthase,
putative - Plasmodium vivax
Length = 375
Score = 76.6 bits (180), Expect = 6e-13
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Frame = +3
Query: 261 KKMFDDLLPEVIMTLQNKSKLSEVPQ-IGDWLKKMLHYNLVGGKHTRXITTVIXYKTIEK 437
+ M+D + L S E+ + I + K + YN +GGK+ R I ++ Y+ ++
Sbjct: 17 RNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYEYVKN 76
Query: 438 PEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDS 617
+ + K AC L WC+E+ QA +V DDIMD RR CWY +V ND
Sbjct: 77 RDINSSEWEKAAC-LAWCIEILQAAFLVADDIMDKGETRRNKYCWYLLKDVETKNAVNDV 135
Query: 618 LXIHSXLXEFLKTNXXDQS 674
L +++ + + ++ ++S
Sbjct: 136 LLLYNSIYKLIEIYLRNES 154
>UniRef50_Q4QBL1 Cluster: Farnesyl pyrophosphate synthase, putative;
n=11; Trypanosomatidae|Rep: Farnesyl pyrophosphate
synthase, putative - Leishmania major
Length = 362
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Frame = +3
Query: 348 WLKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVT----EHTLKMACKLGWCVEMFQAYC 515
+LK M+ +GGK+ R + V + + K ++ E L AC GW +EM QA+
Sbjct: 35 YLKSMMDTTCLGGKYNRGLCVVDVAEAMAKDTQMDAAAMERVLHDACVCGWMIEMLQAHF 94
Query: 516 IVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLXI 626
+V DDIMD S RRG PCWY P V ND L +
Sbjct: 95 LVEDDIMDHSKTRRGKPCWYLHPGVTAQVAINDGLIL 131
>UniRef50_Q0CIT1 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 342
Score = 74.9 bits (176), Expect = 2e-12
Identities = 50/130 (38%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
Frame = +3
Query: 270 FDDLLPEVIMTLQNKSKLSEVPQ-IGDWLKKMLHYNLVGGKHTRXITTVIXYKTI-EKPE 443
F +L + +Q + P I D L++ L N GK R +T V T+ ++P
Sbjct: 7 FKSVLEVLANEIQEDLSERKAPSAIRDRLQQCLLANTKDGKLNRGLTVVDTGCTLLQRPP 66
Query: 444 KVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLX 623
E + LGW VEMFQA +V DDIMD S RRG CWYRR EVG+T ND+
Sbjct: 67 TPAE--FQDLSILGWMVEMFQASYLVSDDIMDNSEYRRGKLCWYRRDEVGLTA-INDAAF 123
Query: 624 IHSXLXEFLK 653
+ S + LK
Sbjct: 124 LKSLMFSLLK 133
>UniRef50_Q5DC19 Cluster: SJCHGC02430 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02430 protein - Schistosoma
japonicum (Blood fluke)
Length = 386
Score = 72.9 bits (171), Expect = 8e-12
Identities = 34/118 (28%), Positives = 60/118 (50%)
Frame = +3
Query: 222 MTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRX 401
M TA +++ K++F+ + ++L ++ + + ++ YNL GK R
Sbjct: 1 MPTADLHIKFREVKEIFESYF-DTFVSLLHRGYPKSLELAKQHFQNVVSYNLSSGKRIRG 59
Query: 402 ITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWY 575
+ V+ Y + +L +GWCVE+ A +VLDDI+D S++RRG PCW+
Sbjct: 60 VLVVLSYLVFRNKNDDPKRSLSFVYLIGWCVELLHAGFLVLDDIIDNSTLRRGQPCWH 117
>UniRef50_UPI0000DB7C0D Cluster: PREDICTED: similar to Farnesyl
pyrophosphate synthase CG12389-PA, partial; n=7; Apis
mellifera|Rep: PREDICTED: similar to Farnesyl
pyrophosphate synthase CG12389-PA, partial - Apis
mellifera
Length = 545
Score = 71.7 bits (168), Expect = 2e-11
Identities = 41/152 (26%), Positives = 76/152 (50%)
Frame = +3
Query: 198 RYKNNSAXMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNL 377
R K+N S N +E+ + P ++ L K E+ + W+ ++L YN+
Sbjct: 210 RLKSNKVRRLVDSFN----DERNKLMTVWPNIVNEL-TKDNNEELLDVNKWITEVLEYNV 264
Query: 378 VGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRR 557
G R ++ VI K + ++TE ++A L WC+E+ QA + DDI+D +++RR
Sbjct: 265 PKGGKRRSVSFVIACKLLTSQNQLTEENTRLAHILAWCIEIMQAVHTMADDILDHANMRR 324
Query: 558 GMPCWYRRPEVGITCXFNDSLXIHSXLXEFLK 653
P W+ ++G+ ND L I + + + ++
Sbjct: 325 NQPAWH--VKIGLFA-VNDILLIETCIYKLIQ 353
>UniRef50_A2E130 Cluster: Polyprenyl synthetase family protein; n=2;
Trichomonas vaginalis G3|Rep: Polyprenyl synthetase
family protein - Trichomonas vaginalis G3
Length = 334
Score = 66.5 bits (155), Expect = 7e-10
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Frame = +3
Query: 345 DWLKK----MLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAY 512
DW++K ML Y+ GGK R I T Y + +E K+ LGW E+ A
Sbjct: 28 DWVQKHCIDMLEYSTKGGKMLRGIMTAAVYLELTGYSPDSEEA-KVGYYLGWVEEIIHAG 86
Query: 513 CIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLXI 626
++ DD+MD S RRG CWY+R E+G ND L +
Sbjct: 87 YLIADDLMDQSETRRGQECWYKREEIGDQA-VNDGLIL 123
>UniRef50_O62336 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 352
Score = 66.1 bits (154), Expect = 9e-10
Identities = 29/100 (29%), Positives = 55/100 (55%)
Frame = +3
Query: 354 KKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDI 533
+ + ++GGK++R V + ++ + L+ C+ +E+ Q++ ++ DDI
Sbjct: 42 RNLFDNTVIGGKYSRASLCVDTIRALQPHLRDETQELQAVCEAAATLEIIQSFYLIADDI 101
Query: 534 MDGSSVRRGMPCWYRRPEVGITCXFNDSLXIHSXLXEFLK 653
MD S RRG PCW+RR VG++ ND+ + S + + L+
Sbjct: 102 MDNSETRRGKPCWFRREGVGMSA-INDAFIMDSFVEDILR 140
>UniRef50_UPI00005A15CB Cluster: PREDICTED: similar to Farnesyl
pyrophosphate synthetase (FPP synthetase) (FPS)
(Farnesyl diphosphate synthetase); n=2; Eutheria|Rep:
PREDICTED: similar to Farnesyl pyrophosphate synthetase
(FPP synthetase) (FPS) (Farnesyl diphosphate synthetase)
- Canis familiaris
Length = 262
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +3
Query: 429 IEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXF 608
I + ++V E+ A +GWC+E+ QA+ +V DDIMD S ++G CWY++P +G+
Sbjct: 42 IAQLKEVLEYNAVGALTVGWCMELLQAFFLVSDDIMDSSLTQQGQICWYQKPGIGLDA-I 100
Query: 609 NDSLXIHSXLXEFLKTNXXDQ 671
ND+L + + + LK +Q
Sbjct: 101 NDALLLEACIYCLLKVYCQEQ 121
>UniRef50_Q197X6 Cluster: Farnesyl diphosphate synthase; n=2;
Toxoplasma gondii|Rep: Farnesyl diphosphate synthase -
Toxoplasma gondii
Length = 646
Score = 65.3 bits (152), Expect = 2e-09
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +3
Query: 480 LGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLXIHSXLXEFLKTN 659
LGWCVE+ Q+ +V+DD+MD S RRG CWYR +G++ NDSL + + + L+
Sbjct: 316 LGWCVELLQSCFLVMDDVMDHSLTRRGKQCWYRCDGIGVSNAVNDSLVLEAAVYRVLREY 375
Query: 660 XXD 668
D
Sbjct: 376 LGD 378
>UniRef50_UPI00005A125B Cluster: PREDICTED: similar to Farnesyl
pyrophosphate synthetase (FPP synthetase) (FPS)
(Farnesyl diphosphate synthetase); n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to Farnesyl
pyrophosphate synthetase (FPP synthetase) (FPS)
(Farnesyl diphosphate synthetase) - Canis familiaris
Length = 259
Score = 63.7 bits (148), Expect = 5e-09
Identities = 29/71 (40%), Positives = 42/71 (59%)
Frame = +3
Query: 444 KVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLX 623
K +L+ A +GWCVE+ QA+ +V DDIMD + R G CWY+ P +G+ ND+L
Sbjct: 26 KAVGGSLRRALSVGWCVELLQAFFLVSDDIMDLTLTRWGQICWYQNPGIGLDA-INDALL 84
Query: 624 IHSXLXEFLKT 656
S + LK+
Sbjct: 85 PESCIYRLLKS 95
>UniRef50_A2ZWU6 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 306
Score = 60.9 bits (141), Expect = 3e-08
Identities = 36/98 (36%), Positives = 49/98 (50%)
Frame = +3
Query: 360 MLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMD 539
ML YN++GG+ ++ KP T + GW QAY +VLDDIMD
Sbjct: 52 MLDYNVLGGEKN-----MLFRNNATKPNNGT-------LRYGW---QLQAYFLVLDDIMD 96
Query: 540 GSSVRRGMPCWYRRPEVGITCXFNDSLXIHSXLXEFLK 653
S RRG PCW+R P+VG+ ND L + S + +
Sbjct: 97 NSQTRRGKPCWFRLPKVGLIA-INDGLVLRSQISRIFR 133
>UniRef50_Q4UAU6 Cluster: Farnesyl pyrophosphate synthetase,
putative; n=2; Theileria|Rep: Farnesyl pyrophosphate
synthetase, putative - Theileria annulata
Length = 384
Score = 58.4 bits (135), Expect = 2e-07
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Frame = +3
Query: 267 MFDDLLPEVIMTLQNKSKLSEVPQ-IGDWLKKMLHYNLVGGKHTRXITTVIXYKTI---E 434
+ D P+ + N+ K + Q + + + YNL GGK R + K++
Sbjct: 18 LLKDFFPKFLELAINELKTYGLSQNVLLYYSYAVQYNLQGGKMLRGTMVLSTVKSLCGTN 77
Query: 435 KPEKVTEHTLKMACK---------LGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPE 587
PE + TL + + WCVE+ Q +V DDI+D S+ RR CWY P
Sbjct: 78 IPENLMTQTLIVGMYNSNHLKQFIVAWCVELLQTSFLVADDIIDKSTKRRSNTCWYLVPT 137
Query: 588 VGITCXFNDSLXIHSXLXEFLKTNXXD 668
+G++ ND + +++ + L D
Sbjct: 138 IGVSNAINDVMFLYTLIYRILFNTMKD 164
>UniRef50_O59703 Cluster: Farnesyl pyrophosphate synthetase; n=1;
Schizosaccharomyces pombe|Rep: Farnesyl pyrophosphate
synthetase - Schizosaccharomyces pombe (Fission yeast)
Length = 351
Score = 57.6 bits (133), Expect = 3e-07
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Frame = +3
Query: 261 KKMFDDLLPEVIMTLQN-KSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXYKTIEK 437
KK D P V+ ++ + P+ + L + N +GGK+ R + + ++
Sbjct: 12 KKRLLDFFPVVLEGIREILESMQYFPEETEKLLYSIKRNTLGGKNNRGLAVLQSLTSLIN 71
Query: 438 PEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDS 617
E + E + A LGW +E+ Q ++ DDIMD S RRG+ CWY VG+ N+S
Sbjct: 72 RE-LEEAEFRDAALLGWLIEILQGCFLMADDIMDQSIKRRGLDCWYL--VVGVRRAINES 128
Query: 618 LXIHSXL 638
+ + +
Sbjct: 129 QLLEACI 135
>UniRef50_Q5CLA5 Cluster: Farnesyl pyrophosphate synthase; n=3;
Cryptosporidium|Rep: Farnesyl pyrophosphate synthase -
Cryptosporidium hominis
Length = 353
Score = 56.0 bits (129), Expect = 9e-07
Identities = 34/110 (30%), Positives = 51/110 (46%)
Frame = +3
Query: 246 EIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXYK 425
+ IN F ++ V+ L ++ + P I +L + YN+ GKH R V+
Sbjct: 12 DFINYYDKFKVIIYNVLEKLPLNDEIRK-PVIEYYLN-CIDYNVKKGKHIRGKILVLISS 69
Query: 426 TIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWY 575
+ ++ + LGW VE QA ++ DDIMD RRG PCWY
Sbjct: 70 LSSAYSNIKRDSIYL---LGWVVEAIQALILIADDIMDSGKFRRGAPCWY 116
>UniRef50_A7AX33 Cluster: Farnesyl pyrophosphate synthetase ,
putative; n=1; Babesia bovis|Rep: Farnesyl pyrophosphate
synthetase , putative - Babesia bovis
Length = 336
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 363 LHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLG--WCVEMFQAYCIVLDDIM 536
+ YNL GGK R V + I + ++E+ K+A LG WCVE+ Q +V DDIM
Sbjct: 52 IQYNLQGGKLIRGTLVVATTRCI-LGDNISEYQWKLALILGMGWCVELLQTAFLVADDIM 110
Query: 537 DGSSVRRGMPCW 572
D S +RR CW
Sbjct: 111 DKSVMRRSNLCW 122
>UniRef50_Q8SQS0 Cluster: FARNESYL PYROPHOSPHATE SYNTHETASE; n=1;
Encephalitozoon cuniculi|Rep: FARNESYL PYROPHOSPHATE
SYNTHETASE - Encephalitozoon cuniculi
Length = 292
Score = 53.6 bits (123), Expect = 5e-06
Identities = 30/72 (41%), Positives = 41/72 (56%)
Frame = +3
Query: 360 MLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMD 539
+L YNL GGK R V K + +V+ L M G+ VE+ QA +++DDIMD
Sbjct: 25 LLDYNLGGGKELRYKAYVHVLKALNG--EVSMENLIM----GYSVELLQAVLLIVDDIMD 78
Query: 540 GSSVRRGMPCWY 575
S +RRG PC+Y
Sbjct: 79 NSKIRRGKPCYY 90
>UniRef50_A2EN50 Cluster: Polyprenyl synthetase family protein; n=1;
Trichomonas vaginalis G3|Rep: Polyprenyl synthetase
family protein - Trichomonas vaginalis G3
Length = 338
Score = 52.8 bits (121), Expect = 9e-06
Identities = 30/93 (32%), Positives = 47/93 (50%)
Frame = +3
Query: 360 MLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMD 539
++ Y + GGK R + +V + + ++ + A LGW E+ QA +V DD+MD
Sbjct: 38 LVDYTIAGGKCLRGLLSVFGFLELTGYSPDSKEA-EAAYALGWVQEILQASFLVADDLMD 96
Query: 540 GSSVRRGMPCWYRRPEVGITCXFNDSLXIHSXL 638
S +RR PCWY E T +DS + + L
Sbjct: 97 KSPLRRDKPCWYCLQENKYTA-VSDSYFLENVL 128
>UniRef50_Q55EU7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 393
Score = 51.2 bits (117), Expect = 3e-05
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Frame = +3
Query: 435 KPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRP--------EV 590
K + ++H ++ +GWC+E F ++ ++ DDIMD RRG CWYR P +V
Sbjct: 88 KNSETSQHEARI---IGWCLE-FLSFFLITDDIMDNGLTRRGELCWYRHPSPFNPTEHKV 143
Query: 591 GITCXFNDSLXIHSXLXEFLKTNXXDQS 674
G+ NDS+ I S L LK ++S
Sbjct: 144 GMLA-INDSVLIESFLFFILKKYFKNKS 170
>UniRef50_Q7R2I4 Cluster: GLP_623_14387_13164; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_623_14387_13164 - Giardia lamblia
ATCC 50803
Length = 407
Score = 46.8 bits (106), Expect = 6e-04
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Frame = +3
Query: 345 DWLKKMLHYNLVGGKHTRX-ITTVIXYKTIE-------KPEKVTEHTLKMACKLGWCVEM 500
D + +++ YN+VGGK TR + I +T+ + +E +A + E+
Sbjct: 52 DHIVEVIKYNVVGGKMTRGTLAADIFLQTVRFLFSGLLEDSNFSEELFNLAIDICLVQEI 111
Query: 501 FQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLXI 626
Q +++DD++D S++RRG P W R VG ND L +
Sbjct: 112 LQGAFLMIDDVIDHSTIRRGKPSW--RAVVGDEQAVNDGLIL 151
>UniRef50_UPI000038E5D8 Cluster: hypothetical protein Faci_03001280;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001280 - Ferroplasma acidarmanus fer1
Length = 352
Score = 46.0 bits (104), Expect = 0.001
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Frame = +3
Query: 255 NEKKMFDDLLPEVIMTLQN--KSKLSEVP--QIGDWLKKMLHYNLVGGKHTRXITTVIXY 422
N KK D L ++ L+ KL+E +I D + K+ + L GGK R I ++ Y
Sbjct: 7 NYKKTLDGLKDKINAQLEAYFNFKLNECDDTRIKDIIIKLRDFTLNGGKRLRPILMIMGY 66
Query: 423 KTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPE 587
+ E +K + +E+ Q++ ++ DDIMD S +RRG P +++ E
Sbjct: 67 NMFSGQD---ERIIKASIS----IELAQSFLLIHDDIMDQSDMRRGKPSFHKAVE 114
>UniRef50_Q0JWJ4 Cluster: Putative geranylgeranyl diphosphate
synthase; n=1; Streptomyces ambofaciens|Rep: Putative
geranylgeranyl diphosphate synthase - Streptomyces
ambofaciens
Length = 357
Score = 43.2 bits (97), Expect = 0.007
Identities = 28/88 (31%), Positives = 45/88 (51%)
Frame = +3
Query: 315 SKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCV 494
++ S P++ + L+ L GGK R + V+ + E L++A L
Sbjct: 36 ARRSHPPEVANTLRAFL---AAGGKRVRALLCVVGWHAAGGSEDRAA-VLRVAASL---- 87
Query: 495 EMFQAYCIVLDDIMDGSSVRRGMPCWYR 578
E+F A+ ++ DDIMD S+VRRG P +R
Sbjct: 88 ELFVAFALIHDDIMDDSAVRRGRPAVHR 115
>UniRef50_A1R1M5 Cluster: Putative geranylgeranyl pyrophosphate
synthase; n=1; Arthrobacter aurescens TC1|Rep: Putative
geranylgeranyl pyrophosphate synthase - Arthrobacter
aurescens (strain TC1)
Length = 369
Score = 41.5 bits (93), Expect = 0.021
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +3
Query: 372 NLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSV 551
N++GGK R + + Y + K H + A + +E+ ++ DD++DG V
Sbjct: 50 NVLGGKFVRPLLLMETYDALHKHGPAEPHQRETAISIAAAIELLHYAFLLHDDVIDGDLV 109
Query: 552 RRGMP 566
RRG P
Sbjct: 110 RRGHP 114
>UniRef50_Q79ZL1 Cluster: Polyprenyl diphosphate synthase; n=4;
Streptomyces|Rep: Polyprenyl diphosphate synthase -
Streptomyces avermitilis
Length = 413
Score = 41.1 bits (92), Expect = 0.028
Identities = 24/74 (32%), Positives = 37/74 (50%)
Frame = +3
Query: 345 DWLKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVL 524
D +++ + L GGK TR ++ P E L++ G +E+ Q +V
Sbjct: 60 DIAERVARFTLDGGKRTRSQFVWWAHRACGGPAAGAEAALRV----GAALELIQTCALVH 115
Query: 525 DDIMDGSSVRRGMP 566
DD+MDGS +RRG P
Sbjct: 116 DDVMDGSRLRRGRP 129
>UniRef50_Q9RVU0 Cluster: Polyprenyl synthase; n=4; Deinococci|Rep:
Polyprenyl synthase - Deinococcus radiodurans
Length = 320
Score = 39.9 bits (89), Expect = 0.065
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +3
Query: 381 GGKHTRXITTVIXYKTIEK-PEKV-TEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVR 554
GGK R + T++ + + P+ + T H+ +L CVE+ + ++ DD++D S R
Sbjct: 32 GGKRVRPLVTLLAAQALGAGPDALATSHSWDELLRLSVCVELLHSASLLHDDLIDDSDKR 91
Query: 555 RGMPCWYRR 581
RG +RR
Sbjct: 92 RGQETAFRR 100
>UniRef50_Q97C41 Cluster: Farnesyl pyrophosphate synthase; n=3;
Thermoplasmatales|Rep: Farnesyl pyrophosphate synthase -
Thermoplasma volcanium
Length = 354
Score = 39.5 bits (88), Expect = 0.086
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 351 LKKMLHYNLVGGKHTRXITTVIXYKTIEKPEK-VTEHTLKMACKLGWCVEMFQAYCIVLD 527
+K + Y GGK R I ++ Y+ EK + + ++ +E+ Q+Y ++ D
Sbjct: 43 IKIIRDYTEGGGKRLRPIFMILGYRLFSPEEKGIFDASIS--------IELAQSYLLIHD 94
Query: 528 DIMDGSSVRRGMPCWYRRPE 587
D++D S VRRG P + R E
Sbjct: 95 DVIDKSDVRRGKPSMHIRLE 114
>UniRef50_Q8NT37 Cluster: Geranylgeranyl pyrophosphate synthase;
n=14; Corynebacterineae|Rep: Geranylgeranyl
pyrophosphate synthase - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 350
Score = 39.1 bits (87), Expect = 0.11
Identities = 26/91 (28%), Positives = 45/91 (49%)
Frame = +3
Query: 360 MLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMD 539
++H GGK R + ++ + EKP ++E+ +K A VE+ + DD+MD
Sbjct: 64 VMHLTRAGGKRFRPMFALLASEFGEKP--LSENVIKAAV----VVEITHLATLYHDDVMD 117
Query: 540 GSSVRRGMPCWYRRPEVGITCXFNDSLXIHS 632
+S+RRG+P R + + D L H+
Sbjct: 118 EASMRRGVPSANARWDNSVAILAGDILLAHA 148
>UniRef50_Q3SAB7 Cluster: Geranylgeranyl pyrophosphate synthase;
n=1; uncultured euryarchaeote Alv-FOS1|Rep:
Geranylgeranyl pyrophosphate synthase - uncultured
euryarchaeote Alv-FOS1
Length = 352
Score = 39.1 bits (87), Expect = 0.11
Identities = 28/100 (28%), Positives = 51/100 (51%)
Frame = +3
Query: 261 KKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXYKTIEKP 440
K +D L E + K++++ P + + ++ + Y L GGK R + ++ Y+
Sbjct: 13 KSKIEDTLSEFFE--KKKTEVNH-PLLREAVEIIEEYTLRGGKRVRALLMILGYRMYGGK 69
Query: 441 EKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRG 560
+ + +K A L E+ Q+Y ++ DDIMD S +RRG
Sbjct: 70 D---DEIIKAAATL----ELVQSYFLIHDDIMDESDLRRG 102
>UniRef50_UPI0000DB7AE1 Cluster: PREDICTED: hypothetical protein;
n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
- Apis mellifera
Length = 423
Score = 38.7 bits (86), Expect = 0.15
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Frame = +3
Query: 120 DIVDMSVFNCLKFTRKVTYKYWPQLIRYKNNSAXMTTASKNLEIINEKKMFDDLLPEVIM 299
+I++ SV + KV ++ ++ + A + ++ + + + E K+ +++ I
Sbjct: 133 EIIEESVETLHETLIKVESPLGMKIKTFEFDDASILSSPEKTKQLEENKLLEEIPKATIS 192
Query: 300 TLQNKSKLSEVPQIGDWLKKMLHY-------NLVGGKHTRXITTVIXYKTIEKPEKVTEH 458
+L+ K KLSE I KML N+ T I +I +TIEK +
Sbjct: 193 SLEMKIKLSENDDISTVHSKMLEENKLDMTPNITKSIETSDIDQIINDQTIEKSVETIYE 252
Query: 459 TL-KMACKLGWCVEM--FQAYCIVLDDIMD 539
TL K+ LG +E+ F CIV ++ +
Sbjct: 253 TLPKVTSPLGMKIELSNFVDACIVSSELQE 282
>UniRef50_A3TKC8 Cluster: Putative polyprenyl synthase /
dimethylallyltranstransferase; n=1; Janibacter sp.
HTCC2649|Rep: Putative polyprenyl synthase /
dimethylallyltranstransferase - Janibacter sp. HTCC2649
Length = 366
Score = 38.7 bits (86), Expect = 0.15
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 477 KLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYR 578
+L +E FQA ++ DD+MD S RRGMP +R
Sbjct: 80 RLATAMEFFQAAALIHDDVMDDSDTRRGMPAAHR 113
>UniRef50_Q5KSN3 Cluster: Geranylgeranyl diphosphate synthase; n=1;
Streptomyces sp. KO-3988|Rep: Geranylgeranyl diphosphate
synthase - Streptomyces sp. KO-3988
Length = 388
Score = 38.3 bits (85), Expect = 0.20
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 492 VEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVG 593
+E+F A+ ++ DD+MD S RRG P +R E G
Sbjct: 118 LELFHAFTLIHDDVMDASDTRRGRPTLHRTLETG 151
>UniRef50_P54383 Cluster: Geranyltranstransferase; n=27;
Bacteria|Rep: Geranyltranstransferase - Bacillus
subtilis
Length = 272
Score = 38.3 bits (85), Expect = 0.20
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +3
Query: 300 TLQNK-SKLSEVPQIGDWLKKMLHYNL-VGGKHTRXITTVIXYKTIEKPEKVTEHTLKMA 473
T++N+ S +E + D LKK + Y+L GGK R + + K EK
Sbjct: 15 TIENQLSVYTEKLDMPDSLKKSMLYSLQAGGKRLRPLIVLAVLNAYGKSEKD-------G 67
Query: 474 CKLGWCVEMFQAYCIVLDDI--MDGSSVRRGMP 566
+G VEM Y ++ DD+ MD +RRG P
Sbjct: 68 IPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKP 100
>UniRef50_A7BDF8 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 367
Score = 37.9 bits (84), Expect = 0.26
Identities = 24/67 (35%), Positives = 35/67 (52%)
Frame = +3
Query: 381 GGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRG 560
GGK R + + Y + V E +L L +E++QA +V DDI+D + RRG
Sbjct: 48 GGKRFRALMAHVGY-ALSSGTSVEEVSLP---HLSAALELYQASALVHDDIIDKADERRG 103
Query: 561 MPCWYRR 581
MP +RR
Sbjct: 104 MPTPHRR 110
>UniRef50_A2SRA1 Cluster: Polyprenyl synthetase; n=3;
Methanomicrobiales|Rep: Polyprenyl synthetase -
Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 322
Score = 37.9 bits (84), Expect = 0.26
Identities = 24/71 (33%), Positives = 34/71 (47%)
Frame = +3
Query: 354 KKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDI 533
K H + GGK R ++ ++I K +E + A L W + +V DDI
Sbjct: 31 KAASHLLVSGGKRLRPALVLLSAESIRKG--ASEDIFQAALALEWT----HTFTLVHDDI 84
Query: 534 MDGSSVRRGMP 566
MDG S+RRG P
Sbjct: 85 MDGDSLRRGRP 95
>UniRef50_Q5JWR5 Cluster: Protein dopey-1; n=25; Deuterostomia|Rep:
Protein dopey-1 - Homo sapiens (Human)
Length = 2465
Score = 37.9 bits (84), Expect = 0.26
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +3
Query: 198 RYKNNSAXMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQ---IGDWLKKMLH 368
+Y+N A + A KN E +E L ++ LQN +K VP+ IG L + LH
Sbjct: 13 KYRNYVAAIDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKKLTIGKRLAQCLH 72
Query: 369 YNLVGGKHTRXITTV-IXYKTI 431
L GG H + + T I +K I
Sbjct: 73 PALPGGVHRKALETYEIIFKII 94
>UniRef50_A0JV81 Cluster: Polyprenyl synthetase; n=2;
Actinomycetales|Rep: Polyprenyl synthetase -
Arthrobacter sp. (strain FB24)
Length = 364
Score = 37.5 bits (83), Expect = 0.35
Identities = 27/90 (30%), Positives = 41/90 (45%)
Frame = +3
Query: 312 KSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWC 491
+S +S + Q D L + + GGK R + ++ TE G
Sbjct: 30 QSVMSAISQDIDPLMGSISNLVTGGKRLRALMCYWGWRGAGGEAAATE-----VVTAGSA 84
Query: 492 VEMFQAYCIVLDDIMDGSSVRRGMPCWYRR 581
+E+FQA ++ DDI+D S RRG P +RR
Sbjct: 85 LELFQAAALIHDDIIDRSDTRRGGPSVHRR 114
>UniRef50_Q4AET3 Cluster: Farnesyltranstransferase; n=1; Chlorobium
phaeobacteroides BS1|Rep: Farnesyltranstransferase -
Chlorobium phaeobacteroides BS1
Length = 324
Score = 36.7 bits (81), Expect = 0.61
Identities = 29/119 (24%), Positives = 53/119 (44%)
Frame = +3
Query: 264 KMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXYKTIEKPE 443
K +D L+ L+ ++ E ++ + + + Y GGK R + T++ +
Sbjct: 2 KNYDQLISYFEKQLEKQNFAGEPKELYEPISYTISY---GGKRIRPVLTLMACELFCGD- 57
Query: 444 KVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSL 620
E L+ A +E+F + ++ DDIMD + +RRG YR+ I D+L
Sbjct: 58 --AEKALQQAI----AIELFHNFTLIHDDIMDNAPIRRGRETVYRKWNGNIAILSGDTL 110
>UniRef50_A6C8V0 Cluster: Polyprenyl synthetase; n=1; Planctomyces
maris DSM 8797|Rep: Polyprenyl synthetase - Planctomyces
maris DSM 8797
Length = 611
Score = 36.7 bits (81), Expect = 0.61
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 4/122 (3%)
Frame = +3
Query: 267 MFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXYKTIEKPEK 446
+F+D +++ L+ K++ + +G + GGK R T+ Y + K ++
Sbjct: 259 LFEDNFDQILPPLRTKTEAAARTPLGKTEAISYDWLKHGGKRFRPFITLAAYDALIKAQQ 318
Query: 447 V---TEHTLKMAC-KLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFND 614
E T + K +E+F ++ DDI D R G +R+ G+ D
Sbjct: 319 ADDTAETTYPLGVQKAAMAIEVFHKASLIHDDIEDDDQYRYGRETLHRQHGTGMAINIGD 378
Query: 615 SL 620
L
Sbjct: 379 YL 380
>UniRef50_A3CXK9 Cluster: Polyprenyl synthetase; n=1; Methanoculleus
marisnigri JR1|Rep: Polyprenyl synthetase -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 295
Score = 36.7 bits (81), Expect = 0.61
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 384 GKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGM 563
GK R + + + + T L +AC VE+ A ++LDD++DG + RRG+
Sbjct: 40 GKRMRAGLLLYIHAGLARTAAPTRQALDLAC----AVELAHAASLILDDMLDGDTARRGV 95
Query: 564 P 566
P
Sbjct: 96 P 96
>UniRef50_Q58270 Cluster: Bifunctional short chain isoprenyl
diphosphate synthase [Includes: Farnesyl pyrophosphate
synthetase (EC 2.5.1.1) (FPP synthetase)
(Dimethylallyltranstransferase); Geranyltranstransferase
(EC 2.5.1.10)]; n=6; Methanococcales|Rep: Bifunctional
short chain isoprenyl diphosphate synthase [Includes:
Farnesyl pyrophosphate synthetase (EC 2.5.1.1) (FPP
synthetase) (Dimethylallyltranstransferase);
Geranyltranstransferase (EC 2.5.1.10)] - Methanococcus
jannaschii
Length = 327
Score = 36.7 bits (81), Expect = 0.61
Identities = 24/67 (35%), Positives = 31/67 (46%)
Frame = +3
Query: 366 HYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGS 545
H GGK R TV+ Y ++K + E L A VE+ Y ++ DDIMD
Sbjct: 41 HLLFAGGKRIRPYLTVVTYM-LKKDD--IEEVLPAAA----AVELIHNYTLIHDDIMDND 93
Query: 546 SVRRGMP 566
RRG P
Sbjct: 94 DERRGKP 100
>UniRef50_P74906 Cluster: Geranylgeranyl diphosphate synthetase;
n=4; Thermus thermophilus|Rep: Geranylgeranyl
diphosphate synthetase - Thermus thermophilus
Length = 344
Score = 36.3 bits (80), Expect = 0.81
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
Frame = +3
Query: 285 PEVIMTLQNKSKLSEVPQIGDWLKKMLH-YNLVGGKHTRXITTVIXYKTIEKPEKVTEHT 461
PE I + ++ + + +L Y GGK R + TV P
Sbjct: 5 PETIRQALQERLIARLDHTDPLYRDLLQDYPRRGGKMLRGLLTVYSALAHGAP------- 57
Query: 462 LKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSL 620
L+ + +E+FQ + +V DDI DGS RRG P +R + + D++
Sbjct: 58 LEAGLETATALELFQNWVLVHDDIEDGSEERRGRPALHRLHPMPLALNAGDAM 110
>UniRef50_Q64BF4 Cluster: Bifunctional short chain isoprenyl
diphosphate synthase; n=1; uncultured archaeon
GZfos27B6|Rep: Bifunctional short chain isoprenyl
diphosphate synthase - uncultured archaeon GZfos27B6
Length = 360
Score = 36.3 bits (80), Expect = 0.81
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +3
Query: 462 LKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLXIHSXLX 641
+K A C+E F + + DDI D S +RRG P + + GI N +++
Sbjct: 81 IKKALPTAICIEFFHNFSLAHDDIEDDSKLRRGEPALH--VKYGIPIAVNAGDGLYALSY 138
Query: 642 EFLKTN 659
E LK N
Sbjct: 139 EALKAN 144
>UniRef50_Q83N10 Cluster: Geranylgeranyl pyrophosphate synthase;
n=2; Tropheryma whipplei|Rep: Geranylgeranyl
pyrophosphate synthase - Tropheryma whipplei (strain
Twist) (Whipple's bacillus)
Length = 379
Score = 35.9 bits (79), Expect = 1.1
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +3
Query: 447 VTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRR 581
+ E+ ++ + +E+F A +V DD++D S RRG+P ++R
Sbjct: 81 IPENLFELISDIAVAIELFHAAALVHDDLIDKSDSRRGLPAVHKR 125
>UniRef50_Q0SF88 Cluster: Polyprenyl synthetase; n=17;
Actinomycetales|Rep: Polyprenyl synthetase - Rhodococcus
sp. (strain RHA1)
Length = 346
Score = 35.9 bits (79), Expect = 1.1
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +3
Query: 321 LSEVPQIGDWLKKM-LHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVE 497
+SE+ D+L + LH GGK R + TV+ T + K ++ ++ A + VE
Sbjct: 45 VSELSDGEDFLTEAALHLAKAGGKRFRPLFTVL---TAQLGPKASDPSVVTAATV---VE 98
Query: 498 MFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSLXIHS 632
+ + DD+MD +S+RRG P R + D L H+
Sbjct: 99 LVHLATLYHDDVMDEASMRRGAPSANSRWGNSVAILAGDYLFAHA 143
>UniRef50_A2RHR5 Cluster: Prenyl transferase; n=3; Lactococcus
lactis|Rep: Prenyl transferase - Lactococcus lactis
subsp. cremoris (strain MG1363)
Length = 326
Score = 35.9 bits (79), Expect = 1.1
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3
Query: 381 GGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRG 560
GGK R ++ + K E +K+A L EM + ++ DDI+D S +RRG
Sbjct: 44 GGKMVRPALFLLFAGIVPNGSKDEEKLIKIAASL----EMLHSATLIHDDIIDDSPLRRG 99
Query: 561 MP 566
MP
Sbjct: 100 MP 101
>UniRef50_Q4SSX9 Cluster: Chromosome 8 SCAF14344, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 8
SCAF14344, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2446
Score = 35.5 bits (78), Expect = 1.4
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +3
Query: 198 RYKNNSAXMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQ---IGDWLKKMLH 368
+Y+N A + A KN E +E L ++ LQN +K VP+ IG L + LH
Sbjct: 13 KYRNYVAAVDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKKLTIGKRLAQCLH 72
Query: 369 YNLVGGKHTRXITTV-IXYKTI 431
L G H + + T I +K I
Sbjct: 73 PALPSGVHRKALETYEIIFKII 94
>UniRef50_Q6AE53 Cluster: Geranylgeranyl pyrophosphate synthase;
n=3; Actinobacteria (class)|Rep: Geranylgeranyl
pyrophosphate synthase - Leifsonia xyli subsp. xyli
Length = 372
Score = 35.1 bits (77), Expect = 1.9
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Frame = +3
Query: 375 LVGGKHTRXITTVIXYKTIEKP-EKVTEHT------LKMACKLGWCVEMFQAYCIVLDDI 533
L GGK R + ++ + E T+ T L + +E+F A +V DD+
Sbjct: 44 LSGGKRFRALFCFWGWQAVRTSGEDATDETVTAGGPLDAVVSVASALELFHAAALVHDDL 103
Query: 534 MDGSSVRRGMPCWYRRPE 587
+D S RRG P +RR E
Sbjct: 104 IDNSDTRRGAPSVHRRFE 121
>UniRef50_Q54193 Cluster: Geranylgeranyl pyrophosphate synthase;
n=2; Streptomyces griseus|Rep: Geranylgeranyl
pyrophosphate synthase - Streptomyces griseus
Length = 425
Score = 35.1 bits (77), Expect = 1.9
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 471 ACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWY 575
A +LG +E+ Q+ ++ DD+MD S +RRG P +
Sbjct: 106 ALRLGVALELIQSCALIHDDVMDRSRLRRGKPAMH 140
>UniRef50_Q1V225 Cluster: Octaprenyl-diphosphate synthase; n=3;
Bacteria|Rep: Octaprenyl-diphosphate synthase -
Candidatus Pelagibacter ubique HTCC1002
Length = 337
Score = 35.1 bits (77), Expect = 1.9
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +3
Query: 246 EIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNL-VGGKHTRXITTVIXY 422
+I N D + E ++ ++ K K + + D ++KM Y++ GGK R + T+
Sbjct: 10 QINNSYYQLKDSVDEKLVLVEEKIKSKLLSDV-DLVQKMTEYHIDTGGKRLRALLTLGSA 68
Query: 423 KTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRG 560
K + + L CVEM ++ DD++D ++RRG
Sbjct: 69 KLCGYTKGGRD------INLAACVEMIHGATLMHDDVIDLGNIRRG 108
>UniRef50_A3HX57 Cluster: Putative isoprenoid biosynthesis related
protein; n=1; Algoriphagus sp. PR1|Rep: Putative
isoprenoid biosynthesis related protein - Algoriphagus
sp. PR1
Length = 328
Score = 35.1 bits (77), Expect = 1.9
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Frame = +3
Query: 252 INEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNL-VGGKHTRXITTVIXYKT 428
+ EK LL ++ + +QN++ E P+ L + ++Y L +GGK R + +++ Y
Sbjct: 1 MTEKSHATALLDKLEVFIQNQN-FGESPKE---LYEPINYILNIGGKRIRPLLSLLAYGM 56
Query: 429 I-EKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCX 605
E P K+ L A +E+F + ++ DDIMD + +RRG + + + I
Sbjct: 57 YAENPGKI----LSQAS----AIEVFHNFTLMHDDIMDQAPLRRGNATVHEKWDANIAIL 108
Query: 606 FNDSLXI 626
D + +
Sbjct: 109 SGDVMLV 115
>UniRef50_A1R5E5 Cluster: Putative polyprenyl synthetase; n=1;
Arthrobacter aurescens TC1|Rep: Putative polyprenyl
synthetase - Arthrobacter aurescens (strain TC1)
Length = 364
Score = 35.1 bits (77), Expect = 1.9
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 483 GWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRR 581
G +E+FQA ++ DDI+D S RRG P ++R
Sbjct: 82 GCALELFQAAALIHDDIIDRSDTRRGGPSVHKR 114
>UniRef50_A0CE39 Cluster: Chromosome undetermined scaffold_17, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_17,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 366
Score = 35.1 bits (77), Expect = 1.9
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +3
Query: 354 KKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDI 533
K HY GK R + ++ IEK + TE A +E+ +V DDI
Sbjct: 71 KASTHYFSKEGKLIRPMLNLLYANHIEKNSQHTEQQRIWAA----VIEILHVASLVHDDI 126
Query: 534 MDGSSVRRGMP 566
+D S RRG+P
Sbjct: 127 LDASDTRRGIP 137
>UniRef50_A5DBM0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 428
Score = 35.1 bits (77), Expect = 1.9
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +3
Query: 147 CLKFTRKVTYKYWPQLIRYKNNSAXMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLS 326
CLK +K+T K WP +N S + TA N+E+ D +V N + L
Sbjct: 309 CLKVGQKITEKVWPGTQIIENQSKSLITAMINIEV-----PIDTFAKDVGSKGLNVTDLK 363
Query: 327 EVPQIGDWLKKMLHYN 374
EV + D ++ + YN
Sbjct: 364 EVKKCVDTIQYQMAYN 379
>UniRef50_Q9V077 Cluster: IdsA-like multifunctional short chain
isoprenyl diphosphate synthase; n=4;
Thermococcaceae|Rep: IdsA-like multifunctional short
chain isoprenyl diphosphate synthase - Pyrococcus abyssi
Length = 346
Score = 35.1 bits (77), Expect = 1.9
Identities = 24/67 (35%), Positives = 30/67 (44%)
Frame = +3
Query: 366 HYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGS 545
HY L GGK R + + E V + LK A +E+ Y +V DDIMD
Sbjct: 44 HYPLAGGKRIRP------FVVLTATEAVGGNALK-AIYPAVAIELIHNYSLVHDDIMDMD 96
Query: 546 SVRRGMP 566
RRG P
Sbjct: 97 ETRRGKP 103
>UniRef50_Q9HQI3 Cluster: Geranylgeranyl diphosphate synthase; n=5;
Halobacteriaceae|Rep: Geranylgeranyl diphosphate
synthase - Halobacterium salinarium (Halobacterium
halobium)
Length = 347
Score = 35.1 bits (77), Expect = 1.9
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 432 EKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFN 611
E P+ + H M+ + +E+ Q++ ++ DDIMD +RRG P +R +
Sbjct: 75 EFPDCIGGHVDVMSAAVS--IEVIQSFTLIHDDIMDDDDLRRGSPAVHREYDTETAILAG 132
Query: 612 DSL 620
D+L
Sbjct: 133 DTL 135
>UniRef50_A7DRA7 Cluster: Polyprenyl synthetase; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Polyprenyl synthetase
- Candidatus Nitrosopumilus maritimus SCM1
Length = 283
Score = 35.1 bits (77), Expect = 1.9
Identities = 29/107 (27%), Positives = 50/107 (46%)
Frame = +3
Query: 237 KNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVI 416
KN+EI + + + + ++ L + L + + LK Y+L GGK R I +
Sbjct: 4 KNIEINPLLETYGEYIKKIDQALDKELDLYSESEFIEPLK----YSLEGGKRIRPIILTL 59
Query: 417 XYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRR 557
++I KV ++T +C VE I+ DDI+D ++RR
Sbjct: 60 SAESI---GKVDDNTFAASC----AVEFLHMESIIHDDIIDNETMRR 99
>UniRef50_Q9RIY0 Cluster: Putative geranylgeranyl pyrophosphate
synthase; n=1; Streptomyces coelicolor|Rep: Putative
geranylgeranyl pyrophosphate synthase - Streptomyces
coelicolor
Length = 392
Score = 34.7 bits (76), Expect = 2.5
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 477 KLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 566
+ G +E+ QA +V DD+MDGS RRG P
Sbjct: 103 RTGAALELLQACALVHDDVMDGSVQRRGAP 132
>UniRef50_O05708 Cluster: Octaprenyl-diphosphate synthase; n=1;
Treponema pallidum|Rep: Octaprenyl-diphosphate synthase
- Treponema pallidum
Length = 364
Score = 34.7 bits (76), Expect = 2.5
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3
Query: 492 VEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFN 611
VE+ ++ DDI D SS RRG PC Y R G C N
Sbjct: 102 VELIHTASLLHDDIEDHSSTRRGKPCAYLR--YGTDCVLN 139
>UniRef50_A6LMQ9 Cluster: Polyprenyl synthetase; n=1; Thermosipho
melanesiensis BI429|Rep: Polyprenyl synthetase -
Thermosipho melanesiensis BI429
Length = 332
Score = 34.7 bits (76), Expect = 2.5
Identities = 21/76 (27%), Positives = 40/76 (52%)
Frame = +3
Query: 339 IGDWLKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCI 518
+G+ ++++ + L GK R + ++ + KV E K+A +E+ ++ +
Sbjct: 31 VGNLVEELKKFCLRPGKRIRPLLFILGVEGFGG--KVDETVYKIAAT----IEIMHSFLL 84
Query: 519 VLDDIMDGSSVRRGMP 566
+ DDIMD S +RRG P
Sbjct: 85 IHDDIMDQSELRRGQP 100
>UniRef50_A1SLA1 Cluster: Polyprenyl synthetase; n=1; Nocardioides
sp. JS614|Rep: Polyprenyl synthetase - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 358
Score = 34.7 bits (76), Expect = 2.5
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +3
Query: 351 LKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDD 530
L + H ++ GGK R ++ + + E L AC +E+ A +V DD
Sbjct: 42 LVREAHTSVSGGKRFRAAFCYWGHRAVAA-DVPDETALVRACA---SLELLHASALVHDD 97
Query: 531 IMDGSSVRRGMPCWYR 578
+MD S RRG P +R
Sbjct: 98 LMDASDTRRGHPATHR 113
>UniRef50_A3DLU2 Cluster: Polyprenyl synthetase; n=1;
Staphylothermus marinus F1|Rep: Polyprenyl synthetase -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 365
Score = 34.7 bits (76), Expect = 2.5
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +3
Query: 369 YNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSS 548
Y L GGK R +I Y + K + L +E Q+Y +V DDIMD
Sbjct: 47 YTLRGGKRLRAFLVLIGYWS----RKWGYGNIDSIKYLMAGIEFLQSYLLVHDDIMDEDE 102
Query: 549 VRRGMP---CWYRR 581
+RRG P W+ R
Sbjct: 103 IRRGGPTVHVWFDR 116
>UniRef50_UPI0000499D14 Cluster: hypothetical protein 73.t00020;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 73.t00020 - Entamoeba histolytica HM-1:IMSS
Length = 987
Score = 34.3 bits (75), Expect = 3.3
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -3
Query: 295 ITSGRRSSNIFFSLIISRFFEAVVIXALLFLYLISCGQYLYVTLRVNLRQLNTLMS 128
+ +G + N FS I F + I L +LY I CG+ Y++++ R N +S
Sbjct: 600 VFNGMKFKNDLFSAFIYSFEHDISIGILFYLYTICCGESNYMSIKEIKRAFNLSLS 655
>UniRef50_Q8NNM1 Cluster: Geranylgeranyl pyrophosphate synthase;
n=4; Corynebacterium|Rep: Geranylgeranyl pyrophosphate
synthase - Corynebacterium glutamicum (Brevibacterium
flavum)
Length = 371
Score = 34.3 bits (75), Expect = 3.3
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = +3
Query: 339 IGDWLKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCI 518
+ D + + + L GGK R + + + + +E L+ +E QA +
Sbjct: 45 VTDAVAHLRSFVLNGGKRIRPLYAWAGFLAAQGHKNSSEK-LESVLDAAASLEFIQACAL 103
Query: 519 VLDDIMDGSSVRRGMPCWYRRPE 587
+ DDI+D S RRG P +R E
Sbjct: 104 IHDDIIDSSDTRRGAPTVHRAVE 126
>UniRef50_Q8G4G0 Cluster: Probably bifunctional short chain
isoprenyl diphosphate synthase [includes: farnesyl
pyrophosphate synthetase (Fpp synthetase)
(Dimethylallyltransferase); geranyltranstransferase ];
n=4; Bifidobacterium|Rep: Probably bifunctional short
chain isoprenyl diphosphate synthase [includes: farnesyl
pyrophosphate synthetase (Fpp synthetase)
(Dimethylallyltransferase); geranyltranstransferase ] -
Bifidobacterium longum
Length = 372
Score = 34.3 bits (75), Expect = 3.3
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Frame = +3
Query: 285 PEVIMTLQNKSKLSEVPQIGDWLKKMLHY-------NLVGGKHTRXITTVIXYKTIEKPE 443
P +I ++ + ++ D LK ++ + GGK R + + + +
Sbjct: 25 PRIIQLVRELTAAPATDEVADALKPVMEQVVDQAASSSQGGKRLRALLALDAFDILAGD- 83
Query: 444 KVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 566
VT L +E+FQ +V DDI+D S +RRG P
Sbjct: 84 -VTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGKP 123
>UniRef50_Q82P04 Cluster: Putative polyprenyl diphosphate synthase;
n=2; Streptomyces|Rep: Putative polyprenyl diphosphate
synthase - Streptomyces avermitilis
Length = 344
Score = 34.3 bits (75), Expect = 3.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 492 VEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSL 620
VE+ + ++ DDIMDG ++RRG P ++ G D+L
Sbjct: 92 VELVHTFSLLHDDIMDGDAMRRGRPALWKAYGTGPAVLAGDAL 134
>UniRef50_Q3ACT5 Cluster: Heptaprenyl diphosphate synthase component
II; n=1; Carboxydothermus hydrogenoformans Z-2901|Rep:
Heptaprenyl diphosphate synthase component II -
Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 326
Score = 34.3 bits (75), Expect = 3.3
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +3
Query: 258 EKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKK-MLHYNLVGGKHTRXITTVIXYKTIE 434
EKK+F+ L+ E + ++ + + EV + ++L +H GGK R ++
Sbjct: 8 EKKLFE-LVKEDLRKIEQEL-IKEVSERNEFLHDPAMHLLKAGGKRLRPAFALLA----- 60
Query: 435 KPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 566
K+ ++ + L +E+ +V DD++D S +RRG+P
Sbjct: 61 --AKLGDYDFEKVKPLAVALELIHMATLVHDDVVDNSMLRRGLP 102
>UniRef50_Q2JD77 Cluster: Polyprenyl synthetase; n=2; Frankia|Rep:
Polyprenyl synthetase - Frankia sp. (strain CcI3)
Length = 634
Score = 34.3 bits (75), Expect = 3.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 492 VEMFQAYCIVLDDIMDGSSVRRGMPCWYRR 581
+E+ A ++ DD+MD S RRG P +RR
Sbjct: 322 IELLHACALIHDDVMDASDTRRGRPAAHRR 351
>UniRef50_Q4W8B2 Cluster: GGPP synthase; n=2; Brevundimonas|Rep:
GGPP synthase - Brevundimonas sp. SD212
Length = 298
Score = 34.3 bits (75), Expect = 3.3
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 471 ACKLGWCVEMFQAYCIVLDDI--MDGSSVRRGMPCWYRR 581
A G VEM A +VLDD+ MD +++RRG P +RR
Sbjct: 75 ALDFGCAVEMAHAASLVLDDLPCMDDAALRRGQPTLHRR 113
>UniRef50_Q2I775 Cluster: PlaT4; n=1; Streptomyces sp. Tu6071|Rep:
PlaT4 - Streptomyces sp. Tu6071
Length = 359
Score = 34.3 bits (75), Expect = 3.3
Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 1/111 (0%)
Frame = +3
Query: 246 EIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXYK 425
EI +M +L + + ++ + G W L GK R TV+ +
Sbjct: 27 EIERVNRMVTPILHQAVTRFDDRLRPMVAHHFG-WPSSDLPTATTSGKMVRATLTVLTGE 85
Query: 426 TIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPC-WY 575
+ + G VEM + ++ DD+MDG RRG P W+
Sbjct: 86 CFTTDAEA----ISRVTAAGAAVEMIHNFSLIHDDVMDGDRERRGRPAVWH 132
>UniRef50_A4EBW4 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 341
Score = 34.3 bits (75), Expect = 3.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 492 VEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFND 614
+E FQ+ ++ DDI D +RRG PC + G+ D
Sbjct: 82 IEHFQSGALIHDDIADNGQLRRGKPCMHLTEGTGLAINCGD 122
>UniRef50_Q9YB31 Cluster: Farnesylgeranyl diphosphate synthase; n=2;
Aeropyrum pernix|Rep: Farnesylgeranyl diphosphate
synthase - Aeropyrum pernix
Length = 332
Score = 34.3 bits (75), Expect = 3.3
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +3
Query: 363 LHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDG 542
LH GGK R + T++ + + E A L +E + ++ DDIMD
Sbjct: 37 LHLIKAGGKRLRPLITLLTARMLGGLEAEAR-----AIPLAASIETAHTFSLIHDDIMDR 91
Query: 543 SSVRRGMP 566
VRRG+P
Sbjct: 92 DEVRRGVP 99
>UniRef50_Q8UBX7 Cluster: Geranyltranstransferase; n=4;
Rhizobium/Agrobacterium group|Rep:
Geranyltranstransferase - Agrobacterium tumefaciens
(strain C58 / ATCC 33970)
Length = 335
Score = 33.9 bits (74), Expect = 4.3
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
Frame = +3
Query: 303 LQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKL 482
L +++ E+ + + L+ M H L GGK R + + + H +
Sbjct: 58 LSGEARADEITRPQNLLEAMRHGVLNGGKRLRPFLVIESVALLGGDAEAGLH-------V 110
Query: 483 GWCVEMFQAYCIVLDDI--MDGSSVRRGMPCWYRRPEVGITCXFNDSL 620
G +E Y +V DD+ MD +RRG P +R+ + DSL
Sbjct: 111 GAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATAILAGDSL 158
>UniRef50_Q5YXP1 Cluster: Polyprenyl synthase; n=1; Nocardia
farcinica|Rep: Polyprenyl synthase - Nocardia farcinica
Length = 385
Score = 33.9 bits (74), Expect = 4.3
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 366 HYNLVGGKHTRXITTVIXYKTIEKPEKVTEH-TLKMACKLGWCVEMFQAYCIVLDDIMDG 542
H GK R + + I P+ H L +AC W EMF +V DDI DG
Sbjct: 95 HILTAPGKRVRAGLALACAQLIPSPDAAPVHDALDIACV--W--EMFHESSLVHDDICDG 150
Query: 543 SSVRRGMP 566
S +RR P
Sbjct: 151 SPLRRDAP 158
>UniRef50_A3GFK9 Cluster: Predicted protein; n=3;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 425
Score = 33.9 bits (74), Expect = 4.3
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = -3
Query: 280 RSSNIFFSLIISRFFEAVVIXALLFLYLISCGQY--LYVTLRVNLRQLNTLMST 125
RSS +F S ++S F A++ +++ G+Y L +TL + R L+TL+S+
Sbjct: 85 RSSTLFISTLVSGFISAIITFPQFQNHILGYGRYYSLDLTLLLTTRALDTLVSS 138
>UniRef50_UPI0001509DE7 Cluster: hypothetical protein TTHERM_00285490;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00285490 - Tetrahymena thermophila SB210
Length = 1629
Score = 33.5 bits (73), Expect = 5.7
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +3
Query: 204 KNNSAXMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVG 383
+ N A T+ + + N K + D +LP+V + KSK+ + Q+ D+ + N
Sbjct: 883 EENKATTTSTTSYAKTQNIKSINDIILPKVKAPPKLKSKIKKTSQVSDFQMDDFNVNNSQ 942
Query: 384 GKHTRXI-TTVIXYKTIE--KPEKVTEHTL 464
+ + I + V+ Y+ IE K ++ TEH +
Sbjct: 943 KRKNQQIQSEVLKYEYIEIVKQKRETEHLM 972
>UniRef50_Q2RM43 Cluster: Polyprenyl synthetase; n=1; Moorella
thermoacetica ATCC 39073|Rep: Polyprenyl synthetase -
Moorella thermoacetica (strain ATCC 39073)
Length = 320
Score = 33.5 bits (73), Expect = 5.7
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +3
Query: 351 LKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDD 530
L+++L Y L GGK R + + + A ++ +E+ +V DD
Sbjct: 21 LQELLDYALEGGKGLRPTLVFLC-------ARFGIYDALEAGRVAAAIELVHLASLVHDD 73
Query: 531 IMDGSSVRRGMPCWYR 578
I+DG++VRR P YR
Sbjct: 74 ILDGAAVRRNRPALYR 89
>UniRef50_Q0UDQ3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 415
Score = 33.5 bits (73), Expect = 5.7
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 438 PEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 566
PE++ H AC+LGW +++DD+ D S +RRG+P
Sbjct: 158 PERIGSHN---ACQLGW----LHTASLLVDDVEDSSLLRRGIP 193
>UniRef50_A6UNE4 Cluster: ATPase; n=1; Methanococcus vannielii
SB|Rep: ATPase - Methanococcus vannielii SB
Length = 423
Score = 33.5 bits (73), Expect = 5.7
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +3
Query: 129 DMSVFNCLKFTRKVTYKYWPQLIRYKNNSAXMTTASKNLEIINE-----KKMFDDLLPEV 293
D SV N LK + Y ++ + + N+S TA N++ + + + D L +V
Sbjct: 69 DNSVLNVLKNDDSIEYNFYSKTKKL-NHSFKFLTAKTNIDDLKKLIGYFENSKDTNLADV 127
Query: 294 IMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXY-KTIEKPEKVTEHTLKM 470
+ + K E P+ WLK++L+ + HT + + Y KT V E++ +
Sbjct: 128 LKNINLSEKKEEFPE---WLKELLNSCKIYFIHTNRLNKISEYEKTKSLDLTVLEYSKDL 184
Query: 471 ACKL 482
K+
Sbjct: 185 VKKI 188
>UniRef50_Q9RUJ1 Cluster: Geranylgeranyl diphosphate synthase; n=2;
Deinococcus|Rep: Geranylgeranyl diphosphate synthase -
Deinococcus radiodurans
Length = 329
Score = 33.1 bits (72), Expect = 7.5
Identities = 31/118 (26%), Positives = 49/118 (41%)
Frame = +3
Query: 267 MFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXYKTIEKPEK 446
M +LL V+ L + S P++ + + Y GGK R + + E
Sbjct: 1 MRPELLARVLSLLP---ETSATPELARFYALLRDYPQRGGKGIRSELLLASARAHGLSES 57
Query: 447 VTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSL 620
T + A L +E+FQ + +V DDI D S RRG P + + + D+L
Sbjct: 58 DTGW--ESALWLAAALELFQNWVLVHDDIEDDSEERRGRPALHHLCGMPVALNVGDAL 113
>UniRef50_Q9S5E9 Cluster: SelF-HepPS; n=1; Synechococcus
elongatus|Rep: SelF-HepPS - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 324
Score = 33.1 bits (72), Expect = 7.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 471 ACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYR 578
A + VE+ + ++ DDIMD S +RRG P YR
Sbjct: 60 AAPVAAAVEILHNFTLIHDDIMDRSPLRRGRPTVYR 95
>UniRef50_A5PJD2 Cluster: MGC152321 protein; n=6; Eutheria|Rep:
MGC152321 protein - Bos taurus (Bovine)
Length = 350
Score = 33.1 bits (72), Expect = 7.5
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 183 WPQLIRYKNNSAXMTTASKNLEIINEKKMFDDLLPEVIMTLQN-KSKLSEVPQIGDWLKK 359
W ++ K N++ ++S +L+ N K DLL + ++ +QN + +L E I D L++
Sbjct: 248 WEEMKPQKMNASGNLSSSSSLDRPNSKPSGADLLEKNLIEIQNLRQRLEESVFINDRLRE 307
Query: 360 MLHYNL 377
L Y L
Sbjct: 308 RLEYVL 313
>UniRef50_Q31Q84 Cluster: Phage late control gene D protein GPD;
n=2; Synechococcus elongatus|Rep: Phage late control
gene D protein GPD - Synechococcus sp. (strain PCC 7942)
(Anacystis nidulans R2)
Length = 480
Score = 32.7 bits (71), Expect = 9.9
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 240 NLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGK 389
+L +++E + D V + L ++ KL E+P+ G WLK L Y GGK
Sbjct: 25 SLTVVDEAEQLSD---RVEIVLDDRDKLLEIPKSGTWLKVYLGY-AEGGK 70
>UniRef50_Q0C4D6 Cluster: Polyprenyl synthetase; n=4;
Alphaproteobacteria|Rep: Polyprenyl synthetase -
Hyphomonas neptunium (strain ATCC 15444)
Length = 337
Score = 32.7 bits (71), Expect = 9.9
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +3
Query: 273 DDLLP-EVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKV 449
DDL E ++ + S ++ +P + ++ GGK R + T+I + K
Sbjct: 26 DDLAAVERLLATRAASPVAVIPDLSGYIVS------AGGKRLRPMITLIAAHAVGKANAA 79
Query: 450 TEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 566
T H L A VE ++ DD++D S +RRG P
Sbjct: 80 T-HALAAA------VEFIHTATLLHDDVVDESDLRRGKP 111
>UniRef50_A7HJU8 Cluster: Polyprenyl synthetase; n=1;
Fervidobacterium nodosum Rt17-B1|Rep: Polyprenyl
synthetase - Fervidobacterium nodosum Rt17-B1
Length = 341
Score = 32.7 bits (71), Expect = 9.9
Identities = 23/102 (22%), Positives = 46/102 (45%)
Frame = +3
Query: 282 LPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHT 461
+ E I TL + K + + ++ + L GK R + ++ Y + K +
Sbjct: 10 IDEKIETLCEELKKIAPENLKELIENFNEFTLRPGKRVRPLLLLLSYNGYKG--KNMDDA 67
Query: 462 LKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPE 587
+ A +E+ ++ +V DDI+D + +RRG P ++ E
Sbjct: 68 ITFAA----AIEIMHSFLLVHDDIIDNADLRRGKPTLHKTYE 105
>UniRef50_Q8ZXZ8 Cluster: Polyprenyl synthetase; n=6;
Thermoproteales|Rep: Polyprenyl synthetase - Pyrobaculum
aerophilum
Length = 334
Score = 32.7 bits (71), Expect = 9.9
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +3
Query: 345 DWLKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVL 524
D+ +++ GGK R + T+ + I K A VE+ Y ++
Sbjct: 30 DFRDAVMYQVKTGGKRLRPLLTLATAEAISGQ-------WKPALPAAAIVELIHNYSLIY 82
Query: 525 DDIMDGSSVRRGMP 566
DDI+D +RRGMP
Sbjct: 83 DDIIDRGDLRRGMP 96
>UniRef50_A7IAG2 Cluster: Farnesyltranstransferase; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Farnesyltranstransferase -
Methanoregula boonei (strain 6A8)
Length = 325
Score = 32.7 bits (71), Expect = 9.9
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 492 VEMFQAYCIVLDDIMDGSSVRRGMP 566
+E+ + ++ DDIMDG S+RRG+P
Sbjct: 76 LEVTHTFTLIHDDIMDGDSLRRGVP 100
>UniRef50_A7DRD5 Cluster: Polyprenyl synthetase; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Polyprenyl synthetase
- Candidatus Nitrosopumilus maritimus SCM1
Length = 326
Score = 32.7 bits (71), Expect = 9.9
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 492 VEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSL 620
VEM + +V DDIMD +R G+P +R+ + I D L
Sbjct: 70 VEMVHNFTLVHDDIMDNDEMRHGVPTTHRKYGMPIAILAGDVL 112
>UniRef50_A0RY19 Cluster: Geranylgeranyl pyrophosphate
synthase/geranyltranstransferase; n=1; Cenarchaeum
symbiosum|Rep: Geranylgeranyl pyrophosphate
synthase/geranyltranstransferase - Cenarchaeum symbiosum
Length = 321
Score = 32.7 bits (71), Expect = 9.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 492 VEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFNDSL 620
+EM + ++ DDIMD S+R G+P +++ V + D L
Sbjct: 65 IEMIHNFTLLHDDIMDNDSIRHGVPTVHKKFGVPVAILAGDVL 107
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,211,872
Number of Sequences: 1657284
Number of extensions: 13568047
Number of successful extensions: 31007
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 30116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30991
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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