Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0442
(750 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071445-1|AAL49067.1| 419|Drosophila melanogaster RE52884p pro... 107 1e-23
AJ009963-1|CAA08919.1| 380|Drosophila melanogaster farnesyl pyr... 107 1e-23
AF132554-1|AAD27853.1| 419|Drosophila melanogaster GM06581p pro... 107 1e-23
AE013599-1264|AAF58670.1| 419|Drosophila melanogaster CG12389-P... 107 1e-23
AY071655-1|AAL49277.1| 485|Drosophila melanogaster RE73545p pro... 30 3.9
AE013599-3480|AAF46908.2| 485|Drosophila melanogaster CG30265-P... 30 3.9
AY071599-1|AAL49221.1| 338|Drosophila melanogaster RE65121p pro... 29 6.8
AF049659-1|AAC05273.1| 338|Drosophila melanogaster geranylgeran... 29 6.8
AE014297-4727|AAF57135.2| 436|Drosophila melanogaster CG31005-P... 29 6.8
AE014296-1239|AAF50574.1| 338|Drosophila melanogaster CG8593-PA... 29 6.8
AE013599-3481|AAF46909.2| 467|Drosophila melanogaster CG12490-P... 29 6.8
BT022901-1|AAY55317.1| 612|Drosophila melanogaster IP12579p pro... 29 8.9
BT022889-1|AAY55305.1| 416|Drosophila melanogaster IP12479p pro... 29 8.9
AY058308-1|AAL13537.1| 828|Drosophila melanogaster GH07092p pro... 29 8.9
AE014298-2285|AAF48539.3| 572|Drosophila melanogaster CG8916-PA... 29 8.9
AE014296-1712|AAF50221.1| 889|Drosophila melanogaster CG6761-PA... 29 8.9
>AY071445-1|AAL49067.1| 419|Drosophila melanogaster RE52884p
protein.
Length = 419
Score = 107 bits (258), Expect = 1e-23
Identities = 48/133 (36%), Positives = 76/133 (57%)
Frame = +3
Query: 255 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXYKTIE 434
+E + F + P+++ + +K W ++L YN+ GK R I TV+ YK +
Sbjct: 82 DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 141
Query: 435 KPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFND 614
+ +T +K+A LGWCVEM Q++ I+ DD+MD S+ RRG PCW++ VG+T ND
Sbjct: 142 PTQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLTA-IND 200
Query: 615 SLXIHSXLXEFLK 653
+L I + + LK
Sbjct: 201 ALMIENAMYAILK 213
>AJ009963-1|CAA08919.1| 380|Drosophila melanogaster farnesyl
pyrophosphate synthase protein.
Length = 380
Score = 107 bits (258), Expect = 1e-23
Identities = 48/133 (36%), Positives = 76/133 (57%)
Frame = +3
Query: 255 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXYKTIE 434
+E + F + P+++ + +K W ++L YN+ GK R I TV+ YK +
Sbjct: 43 DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 102
Query: 435 KPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFND 614
+ +T +K+A LGWCVEM Q++ I+ DD+MD S+ RRG PCW++ VG+T ND
Sbjct: 103 PTQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLTA-IND 161
Query: 615 SLXIHSXLXEFLK 653
+L I + + LK
Sbjct: 162 ALMIENAMYAILK 174
>AF132554-1|AAD27853.1| 419|Drosophila melanogaster GM06581p
protein.
Length = 419
Score = 107 bits (258), Expect = 1e-23
Identities = 48/133 (36%), Positives = 76/133 (57%)
Frame = +3
Query: 255 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXYKTIE 434
+E + F + P+++ + +K W ++L YN+ GK R I TV+ YK +
Sbjct: 82 DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 141
Query: 435 KPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFND 614
+ +T +K+A LGWCVEM Q++ I+ DD+MD S+ RRG PCW++ VG+T ND
Sbjct: 142 PTQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLTA-IND 200
Query: 615 SLXIHSXLXEFLK 653
+L I + + LK
Sbjct: 201 ALMIENAMYAILK 213
>AE013599-1264|AAF58670.1| 419|Drosophila melanogaster CG12389-PA
protein.
Length = 419
Score = 107 bits (258), Expect = 1e-23
Identities = 48/133 (36%), Positives = 76/133 (57%)
Frame = +3
Query: 255 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRXITTVIXYKTIE 434
+E + F + P+++ + +K W ++L YN+ GK R I TV+ YK +
Sbjct: 82 DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 141
Query: 435 KPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCXFND 614
+ +T +K+A LGWCVEM Q++ I+ DD+MD S+ RRG PCW++ VG+T ND
Sbjct: 142 PTQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLTA-IND 200
Query: 615 SLXIHSXLXEFLK 653
+L I + + LK
Sbjct: 201 ALMIENAMYAILK 213
>AY071655-1|AAL49277.1| 485|Drosophila melanogaster RE73545p
protein.
Length = 485
Score = 29.9 bits (64), Expect = 3.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 466 KWLVNWDGVSKCFRHIALCWMTLWMVQASDAA 561
K + W G+S +AL W W V A+D A
Sbjct: 177 KSAIGWPGISYVSAGLALAWCAFWFVFAADNA 208
>AE013599-3480|AAF46908.2| 485|Drosophila melanogaster CG30265-PA
protein.
Length = 485
Score = 29.9 bits (64), Expect = 3.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 466 KWLVNWDGVSKCFRHIALCWMTLWMVQASDAA 561
K + W G+S +AL W W V A+D A
Sbjct: 177 KSAIGWPGISYVSAGLALAWCAFWFVFAADNA 208
>AY071599-1|AAL49221.1| 338|Drosophila melanogaster RE65121p
protein.
Length = 338
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 477 KLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 566
++G V+M +++DDI D S +RRG+P
Sbjct: 60 QIGDIVQMLHNSSLLIDDIEDNSILRRGVP 89
>AF049659-1|AAC05273.1| 338|Drosophila melanogaster geranylgeranyl
pyrophosphate synthaseprotein.
Length = 338
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 477 KLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 566
++G V+M +++DDI D S +RRG+P
Sbjct: 60 QIGDIVQMLHNSSLLIDDIEDNSILRRGVP 89
>AE014297-4727|AAF57135.2| 436|Drosophila melanogaster CG31005-PA
protein.
Length = 436
Score = 29.1 bits (62), Expect = 6.8
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 384 GKHTRXITTVIXYKTIEKPEKVTEHTL-KMACKLGWCVEMFQAYCIVLDDIMDGSSVRRG 560
GK R + T++ K I H L ++ EM + +V DD++D S RRG
Sbjct: 153 GKALRPMVTMLMAKAINYHLNNESHQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRG 212
Query: 561 MP 566
P
Sbjct: 213 KP 214
>AE014296-1239|AAF50574.1| 338|Drosophila melanogaster CG8593-PA
protein.
Length = 338
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 477 KLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 566
++G V+M +++DDI D S +RRG+P
Sbjct: 60 QIGDIVQMLHNSSLLIDDIEDNSILRRGVP 89
>AE013599-3481|AAF46909.2| 467|Drosophila melanogaster CG12490-PA
protein.
Length = 467
Score = 29.1 bits (62), Expect = 6.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 466 KWLVNWDGVSKCFRHIALCWMTLWMVQASDAA 561
K + W G+S +A W +W V A+D A
Sbjct: 165 KSAIGWPGISYVSAGLAFAWCAIWFVFAADNA 196
>BT022901-1|AAY55317.1| 612|Drosophila melanogaster IP12579p
protein.
Length = 612
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/57 (24%), Positives = 24/57 (42%)
Frame = +3
Query: 348 WLKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCI 518
W+ +H + + +T+V+ TI + +K A L W + M YCI
Sbjct: 334 WVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCI 390
>BT022889-1|AAY55305.1| 416|Drosophila melanogaster IP12479p
protein.
Length = 416
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/57 (24%), Positives = 24/57 (42%)
Frame = +3
Query: 348 WLKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCI 518
W+ +H + + +T+V+ TI + +K A L W + M YCI
Sbjct: 138 WVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCI 194
>AY058308-1|AAL13537.1| 828|Drosophila melanogaster GH07092p
protein.
Length = 828
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = -2
Query: 488 PSQFTSHFQSMFGDF--FRFFNCFVXNHSSYSSCM 390
P HF SM G F R FNC SY SC+
Sbjct: 415 PEALRGHFYSMSGLFRCSRCFNCVTNTMKSYVSCV 449
>AE014298-2285|AAF48539.3| 572|Drosophila melanogaster CG8916-PA
protein.
Length = 572
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/57 (24%), Positives = 24/57 (42%)
Frame = +3
Query: 348 WLKKMLHYNLVGGKHTRXITTVIXYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCI 518
W+ +H + + +T+V+ TI + +K A L W + M YCI
Sbjct: 294 WVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCI 350
>AE014296-1712|AAF50221.1| 889|Drosophila melanogaster CG6761-PA
protein.
Length = 889
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = -2
Query: 488 PSQFTSHFQSMFGDF--FRFFNCFVXNHSSYSSCM 390
P HF SM G F R FNC SY SC+
Sbjct: 476 PEALRGHFYSMSGLFRCSRCFNCVTNTMKSYVSCV 510
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,508,875
Number of Sequences: 53049
Number of extensions: 640276
Number of successful extensions: 1505
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1505
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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