Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0441
(600 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 26 0.25
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 23 1.7
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 23 2.3
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 7.0
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 7.0
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 21 9.2
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 9.2
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 9.2
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 9.2
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 9.2
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 9.2
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 26.2 bits (55), Expect = 0.25
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 FSLFDKDGDGTITTKELGTVMRS--LGQNPTEAELQDMINEVDADGNGTIDFPEF 242
FS +D++ +G + +EL + L + L MI+ D DG+G ++ EF
Sbjct: 242 FSHYDRNNNGNLEREELEQFAENEDLEELCRGCNLGHMISYDDTDGDGKLNVNEF 296
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 23.4 bits (48), Expect = 1.7
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = -2
Query: 401 DLLVSEFLS--EVGHDVAQXGRGDEAVAVLVE 312
DL S+ L E+ HDVA G+G E V++ V+
Sbjct: 163 DLNTSQLLKQVEIPHDVATTGKG-ELVSLTVQ 193
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = +2
Query: 464 HHDDVEVSRRLVCV*KAENLNIHFVS*HTILA 559
H E VC+ E + +HF + H +A
Sbjct: 183 HQSGSEAEAEFVCIATPEAIELHFTTDHPSVA 214
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 291 FLPRYPCPSSCAP 253
F P Y P++CAP
Sbjct: 1803 FSPEYDDPANCAP 1815
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 7.0
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 285 PRYPCPSSCAPSLSRTRESLSCRFRP 208
P P P P++ R R L+ RF P
Sbjct: 372 PPTPFPRFIPPNVYRFRPPLNPRFEP 397
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1
Query: 91 CSTKTAMAPSRPKSWA 138
C+T T AP RP A
Sbjct: 8 CTTATLAAPQRPSGGA 23
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -1
Query: 285 PRYPCPSSCAPSLSRTRESLSCRFRP 208
P P P P+ R R L+ RF P
Sbjct: 149 PSTPFPRFIPPNAYRFRPPLNPRFEP 174
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -1
Query: 285 PRYPCPSSCAPSLSRTRESLSCRFRP 208
P P P P+ R R L+ RF P
Sbjct: 152 PSTPFPRFIPPNAYRFRPPLNPRFEP 177
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -1
Query: 285 PRYPCPSSCAPSLSRTRESLSCRFRP 208
P P P P+ R R L+ RF P
Sbjct: 152 PSTPFPRFIPPNAYRFRPPLNPRFEP 177
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -1
Query: 285 PRYPCPSSCAPSLSRTRESLSCRFRP 208
P P P P+ R R L+ RF P
Sbjct: 152 PSTPFPRFIPPNAYRFRPPLNPRFEP 177
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -1
Query: 285 PRYPCPSSCAPSLSRTRESLSCRFRP 208
P P P P+ R R L+ RF P
Sbjct: 152 PSTPFPRFIPPNAYRFRPPLNPRFEP 177
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,117
Number of Sequences: 438
Number of extensions: 2188
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -