Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0440
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145615-1|AAD38590.1|  384|Drosophila melanogaster BcDNA.GH0337...    74   2e-13
AE014134-295|AAF51339.1|  384|Drosophila melanogaster CG17712-PA...    74   2e-13

>AF145615-1|AAD38590.1|  384|Drosophila melanogaster BcDNA.GH03377
           protein.
          Length = 384

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 36/64 (56%), Positives = 44/64 (68%)
 Frame = +3

Query: 3   LCKMISALKEAFLPVKEEMDWIKEPVKAAATFEDGQRVQATMEALRQSNEDGCWTSVKLL 182
           LCKM+ ALKEAF    +E  W+K PV  AATFEDG  VQA +EA+R+SNE   W  V+L 
Sbjct: 308 LCKMVGALKEAF--GSKESSWVKAPVSTAATFEDGLYVQAVVEAIRKSNETRQWQRVQLS 365

Query: 183 TEPP 194
           T+ P
Sbjct: 366 TDSP 369


>AE014134-295|AAF51339.1|  384|Drosophila melanogaster CG17712-PA
           protein.
          Length = 384

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 36/64 (56%), Positives = 44/64 (68%)
 Frame = +3

Query: 3   LCKMISALKEAFLPVKEEMDWIKEPVKAAATFEDGQRVQATMEALRQSNEDGCWTSVKLL 182
           LCKM+ ALKEAF    +E  W+K PV  AATFEDG  VQA +EA+R+SNE   W  V+L 
Sbjct: 308 LCKMVGALKEAF--GSKESSWVKAPVSTAATFEDGLYVQAVVEAIRKSNETRQWQRVQLS 365

Query: 183 TEPP 194
           T+ P
Sbjct: 366 TDSP 369


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,509,520
Number of Sequences: 53049
Number of extensions: 532271
Number of successful extensions: 1373
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1371
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)