Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0439
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            25   2.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   3.3  
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            23   7.6  

>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -1

Query: 120 LESAFMTLEIPVAGAL--LSTPSTESQACPSSCR 25
           LE A +  ++P    L  L TPST  + CP+ CR
Sbjct: 640 LEGALIK-DVPTRELLCELDTPSTAIRHCPAPCR 672


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -1

Query: 333 RRDFLLNYFVVFVSMNSNQESLHSCVFRPATAVSR 229
           RRD  ++Y  +F+ +     +L+SCV    T  +R
Sbjct: 877 RRDHNIDYSSLFIQLTGTFPTLYSCVSCHKTVSNR 911


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 185 IENVETTDSHRGLNLRDTAVAGR 253
           I N  T  SHR ++L+D    GR
Sbjct: 108 ISNSSTNISHRPIDLKDIKARGR 130


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,665
Number of Sequences: 2352
Number of extensions: 11239
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)