Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0439
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB209851-1|BAD93088.1| 2331|Homo sapiens Basement membrane-speci... 43 0.001
X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane h... 41 0.004
M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteogly... 41 0.005
AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteog... 41 0.005
AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteog... 41 0.005
AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteog... 41 0.005
D87469-1|BAA13407.2| 2854|Homo sapiens KIAA0279 protein protein. 31 3.3
AL390252-1|CAI13170.1| 2923|Homo sapiens cadherin, EGF LAG seven... 31 3.3
AF234887-1|AAG00080.1| 2923|Homo sapiens FLAMINGO 1 protein. 31 3.3
AB065955-1|BAC06168.1| 2923|Homo sapiens seven transmembrane hel... 31 3.3
Z95636-1|CAB09137.1| 953|Homo sapiens laminin alpha 5 chain pro... 31 4.4
BC003355-1|AAH03355.1| 670|Homo sapiens LAMA5 protein protein. 31 4.4
AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein. 31 4.4
AK057327-1|BAB71429.1| 721|Homo sapiens protein ( Homo sapiens ... 31 4.4
AF463518-1|AAL68839.1| 1311|Homo sapiens cell recognition protei... 31 4.4
AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain pr... 31 4.4
AB100094-1|BAC55272.1| 1308|Homo sapiens hypothetical protein pr... 31 4.4
AB051550-1|BAB21854.2| 1322|Homo sapiens KIAA1763 protein protein. 31 4.4
AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein. 31 4.4
X96395-1|CAA65259.2| 1545|Homo sapiens canalicular multidrug res... 30 7.7
U63970-1|AAB39892.1| 1545|Homo sapiens canalicular multispecific... 30 7.7
U49248-1|AAB09422.1| 1545|Homo sapiens canalicular multispecific... 30 7.7
AL392107-3|CAI11010.1| 1545|Homo sapiens ATP-binding cassette, s... 30 7.7
AL133353-7|CAI14502.1| 1545|Homo sapiens ATP-binding cassette, s... 30 7.7
AJ132244-1|CAB45309.1| 1545|Homo sapiens multidrug resistance pr... 30 7.7
>AB209851-1|BAD93088.1| 2331|Homo sapiens Basement membrane-specific
heparan sulfate proteoglycan core protein precursor
protein.
Length = 2331
Score = 42.7 bits (96), Expect = 0.001
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Frame = +2
Query: 8 HQVAARLHEDGHAWLSVDGVDK-SAPATGISNVMNADSNIYIGGIPSWLNIHG---YPGF 175
H+V A L E + VDG + S + G + +NA N+YIGG P + G G
Sbjct: 2234 HRVTA-LREGRRGSIQVDGEELVSGRSPGPNVAVNAKGNVYIGGAPDVATLTGGRFSSGI 2292
Query: 176 IGCIENVETTDSHRG------LNLRDTAVAGRNTQLC 268
GC++N+ + G L+L+ A AG NT+ C
Sbjct: 2293 TGCVKNLVLHSARPGAPPPQPLDLQHRAQAGANTRPC 2329
>X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane
heparan sulfate proteoglycan core protein protein.
Length = 4393
Score = 41.1 bits (92), Expect = 0.004
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Frame = +2
Query: 8 HQVAARLHEDGHAWLSVDGVDK-SAPATGISNVMNADSNIYIGGIPSWLNIHG---YPGF 175
H+V A L E + VDG + S + G + +NA +IYIGG P + G G
Sbjct: 4296 HRVTA-LREGRRGSIQVDGEELVSGRSPGPNVAVNAKGSIYIGGAPDVATLTGGRFSSGI 4354
Query: 176 IGCIENVETTDSHRG------LNLRDTAVAGRNTQLC 268
GC++N+ + G L+L+ A AG NT+ C
Sbjct: 4355 TGCVKNLVLHSARPGAPPPQPLDLQHRAQAGANTRPC 4391
>M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteoglycan
protein.
Length = 4391
Score = 40.7 bits (91), Expect = 0.005
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Frame = +2
Query: 8 HQVAARLHEDGHAWLSVDGVDK-SAPATGISNVMNADSNIYIGGIPSWLNIHG---YPGF 175
H+V A L E + VDG + S + G + +NA ++YIGG P + G G
Sbjct: 4294 HRVTA-LREGRRGSIQVDGEELVSGRSPGPNVAVNAKGSVYIGGAPDVATLTGGRFSSGI 4352
Query: 176 IGCIENVETTDSHRG------LNLRDTAVAGRNTQLC 268
GC++N+ + G L+L+ A AG NT+ C
Sbjct: 4353 TGCVKNLVLHSARPGAPPPQPLDLQHRAQAGANTRPC 4389
>AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 40.7 bits (91), Expect = 0.005
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Frame = +2
Query: 8 HQVAARLHEDGHAWLSVDGVDK-SAPATGISNVMNADSNIYIGGIPSWLNIHG---YPGF 175
H+V A L E + VDG + S + G + +NA ++YIGG P + G G
Sbjct: 4294 HRVTA-LREGRRGSIQVDGEELVSGRSPGPNVAVNAKGSVYIGGAPDVATLTGGRFSSGI 4352
Query: 176 IGCIENVETTDSHRG------LNLRDTAVAGRNTQLC 268
GC++N+ + G L+L+ A AG NT+ C
Sbjct: 4353 TGCVKNLVLHSARPGAPPPQPLDLQHRAQAGANTRPC 4389
>AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 40.7 bits (91), Expect = 0.005
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Frame = +2
Query: 8 HQVAARLHEDGHAWLSVDGVDK-SAPATGISNVMNADSNIYIGGIPSWLNIHG---YPGF 175
H+V A L E + VDG + S + G + +NA ++YIGG P + G G
Sbjct: 4294 HRVTA-LREGRRGSIQVDGEELVSGRSPGPNVAVNAKGSVYIGGAPDVATLTGGRFSSGI 4352
Query: 176 IGCIENVETTDSHRG------LNLRDTAVAGRNTQLC 268
GC++N+ + G L+L+ A AG NT+ C
Sbjct: 4353 TGCVKNLVLHSARPGAPPPQPLDLQHRAQAGANTRPC 4389
>AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteoglycan
perlecan protein.
Length = 4370
Score = 40.7 bits (91), Expect = 0.005
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Frame = +2
Query: 8 HQVAARLHEDGHAWLSVDGVDK-SAPATGISNVMNADSNIYIGGIPSWLNIHG---YPGF 175
H+V A L E + VDG + S + G + +NA ++YIGG P + G G
Sbjct: 4273 HRVTA-LREGRRGSIQVDGEELVSGRSPGPNVAVNAKGSVYIGGAPDVATLTGGRFSSGI 4331
Query: 176 IGCIENVETTDSHRG------LNLRDTAVAGRNTQLC 268
GC++N+ + G L+L+ A AG NT+ C
Sbjct: 4332 TGCVKNLVLHSARPGAPPPQPLDLQHRAQAGANTRPC 4368
>D87469-1|BAA13407.2| 2854|Homo sapiens KIAA0279 protein protein.
Length = 2854
Score = 31.5 bits (68), Expect = 3.3
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 38 GHAWLSVDGVDKSAPATGISNVMNAD-SNIYIGGIPSWLNIHGYPGFIGCIENVETTDSH 214
GHA LS D + A + SNI +GGIP GF GC++ V +D+
Sbjct: 1644 GHAILSFDYGQQRAEGNLGPRLHGLHLSNITVGGIPGPAGGVAR-GFRGCLQGVRVSDTP 1702
Query: 215 RGLNLRD 235
G+N D
Sbjct: 1703 EGVNSLD 1709
>AL390252-1|CAI13170.1| 2923|Homo sapiens cadherin, EGF LAG seven-pass
G-type receptor 2 (flamingo homolog, Drosophila) protein.
Length = 2923
Score = 31.5 bits (68), Expect = 3.3
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 38 GHAWLSVDGVDKSAPATGISNVMNAD-SNIYIGGIPSWLNIHGYPGFIGCIENVETTDSH 214
GHA LS D + A + SNI +GGIP GF GC++ V +D+
Sbjct: 1713 GHAILSFDYGQQRAEGNLGPRLHGLHLSNITVGGIPGPAGGVAR-GFRGCLQGVRVSDTP 1771
Query: 215 RGLNLRD 235
G+N D
Sbjct: 1772 EGVNSLD 1778
>AF234887-1|AAG00080.1| 2923|Homo sapiens FLAMINGO 1 protein.
Length = 2923
Score = 31.5 bits (68), Expect = 3.3
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 38 GHAWLSVDGVDKSAPATGISNVMNAD-SNIYIGGIPSWLNIHGYPGFIGCIENVETTDSH 214
GHA LS D + A + SNI +GGIP GF GC++ V +D+
Sbjct: 1713 GHAILSFDYGQQRAEGNLGPRLHGLHLSNITVGGIPGPAGGVAR-GFRGCLQGVRVSDTP 1771
Query: 215 RGLNLRD 235
G+N D
Sbjct: 1772 EGVNSLD 1778
>AB065955-1|BAC06168.1| 2923|Homo sapiens seven transmembrane helix
receptor protein.
Length = 2923
Score = 31.5 bits (68), Expect = 3.3
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 38 GHAWLSVDGVDKSAPATGISNVMNAD-SNIYIGGIPSWLNIHGYPGFIGCIENVETTDSH 214
GHA LS D + A + SNI +GGIP GF GC++ V +D+
Sbjct: 1713 GHAILSFDYGQQRAEGNLGPRLHGLHLSNITVGGIPGPAGGVAR-GFRGCLQGVRVSDTP 1771
Query: 215 RGLNLRD 235
G+N D
Sbjct: 1772 EGVNSLD 1778
>Z95636-1|CAB09137.1| 953|Homo sapiens laminin alpha 5 chain
protein.
Length = 953
Score = 31.1 bits (67), Expect = 4.4
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +2
Query: 68 DKSAP-ATGISNVMNADSNIYIGGIPSWLN---IHGYPGFIGCIE 190
D AP A G+ N+ D Y+GG PS + +PG+ GCIE
Sbjct: 115 DTVAPGAEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGCIE 159
>BC003355-1|AAH03355.1| 670|Homo sapiens LAMA5 protein protein.
Length = 670
Score = 31.1 bits (67), Expect = 4.4
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +2
Query: 68 DKSAP-ATGISNVMNADSNIYIGGIPSWLN---IHGYPGFIGCIE 190
D AP A G+ N+ D Y+GG PS + +PG+ GCIE
Sbjct: 63 DTVAPGAEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGCIE 107
>AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein.
Length = 3690
Score = 31.1 bits (67), Expect = 4.4
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +2
Query: 68 DKSAP-ATGISNVMNADSNIYIGGIPSWLN---IHGYPGFIGCIE 190
D AP A G+ N+ D Y+GG PS + +PG+ GCIE
Sbjct: 2857 DTVAPGAEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGCIE 2901
>AK057327-1|BAB71429.1| 721|Homo sapiens protein ( Homo sapiens
cDNA FLJ32765 fis, clone TESTI2001852, weakly similar to
Homo sapiens contactin associated protein (Caspr) mRNA.
).
Length = 721
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 83 ATGISNVMNADSNIYIGGIPSWLNIHGYP--GFIGCIENV 196
A G N+MN D I GGIP+ +P F GC+EN+
Sbjct: 272 ARGEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENL 311
>AF463518-1|AAL68839.1| 1311|Homo sapiens cell recognition protein
CASPR4 protein.
Length = 1311
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 83 ATGISNVMNADSNIYIGGIPSWLNIHGYP--GFIGCIENV 196
A G N+MN D I GGIP+ +P F GC+EN+
Sbjct: 300 ARGEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENL 339
>AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain
precursor protein.
Length = 3695
Score = 31.1 bits (67), Expect = 4.4
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +2
Query: 68 DKSAP-ATGISNVMNADSNIYIGGIPSWLN---IHGYPGFIGCIE 190
D AP A G+ N+ D Y+GG PS + +PG+ GCIE
Sbjct: 2857 DTVAPGAEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGCIE 2901
>AB100094-1|BAC55272.1| 1308|Homo sapiens hypothetical protein
protein.
Length = 1308
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 83 ATGISNVMNADSNIYIGGIPSWLNIHGYP--GFIGCIENV 196
A G N+MN D I GGIP+ +P F GC+EN+
Sbjct: 297 ARGEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENL 336
>AB051550-1|BAB21854.2| 1322|Homo sapiens KIAA1763 protein protein.
Length = 1322
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 83 ATGISNVMNADSNIYIGGIPSWLNIHGYP--GFIGCIENV 196
A G N+MN D I GGIP+ +P F GC+EN+
Sbjct: 311 ARGEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENL 350
>AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein.
Length = 1645
Score = 31.1 bits (67), Expect = 4.4
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +2
Query: 68 DKSAP-ATGISNVMNADSNIYIGGIPSWLN---IHGYPGFIGCIE 190
D AP A G+ N+ D Y+GG PS + +PG+ GCIE
Sbjct: 807 DTVAPGAEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGCIE 851
>X96395-1|CAA65259.2| 1545|Homo sapiens canalicular multidrug
resistance protein protein.
Length = 1545
Score = 30.3 bits (65), Expect = 7.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 264 YAETPDLSSSKRKLRNN*VKNLYAFIKLECIVYFKY 371
+A P + LR +KNL AF +L+C+V F +
Sbjct: 515 FAWEPSFRDQVQNLRKKELKNLLAFSQLQCVVIFVF 550
>U63970-1|AAB39892.1| 1545|Homo sapiens canalicular multispecific
organic anion transporter protein.
Length = 1545
Score = 30.3 bits (65), Expect = 7.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 264 YAETPDLSSSKRKLRNN*VKNLYAFIKLECIVYFKY 371
+A P + LR +KNL AF +L+C+V F +
Sbjct: 515 FAWEPSFRDQVQNLRKKELKNLLAFSQLQCVVIFVF 550
>U49248-1|AAB09422.1| 1545|Homo sapiens canalicular multispecific
organic anion transporter protein.
Length = 1545
Score = 30.3 bits (65), Expect = 7.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 264 YAETPDLSSSKRKLRNN*VKNLYAFIKLECIVYFKY 371
+A P + LR +KNL AF +L+C+V F +
Sbjct: 515 FAWEPSFRDQVQNLRKKELKNLLAFSQLQCVVIFVF 550
>AL392107-3|CAI11010.1| 1545|Homo sapiens ATP-binding cassette,
sub-family C (CFTR/MRP), member 2 protein.
Length = 1545
Score = 30.3 bits (65), Expect = 7.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 264 YAETPDLSSSKRKLRNN*VKNLYAFIKLECIVYFKY 371
+A P + LR +KNL AF +L+C+V F +
Sbjct: 515 FAWEPSFRDQVQNLRKKELKNLLAFSQLQCVVIFVF 550
>AL133353-7|CAI14502.1| 1545|Homo sapiens ATP-binding cassette,
sub-family C (CFTR/MRP), member 2 protein.
Length = 1545
Score = 30.3 bits (65), Expect = 7.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 264 YAETPDLSSSKRKLRNN*VKNLYAFIKLECIVYFKY 371
+A P + LR +KNL AF +L+C+V F +
Sbjct: 515 FAWEPSFRDQVQNLRKKELKNLLAFSQLQCVVIFVF 550
>AJ132244-1|CAB45309.1| 1545|Homo sapiens multidrug resistance
protein 2 (MRP2) protein.
Length = 1545
Score = 30.3 bits (65), Expect = 7.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 264 YAETPDLSSSKRKLRNN*VKNLYAFIKLECIVYFKY 371
+A P + LR +KNL AF +L+C+V F +
Sbjct: 515 FAWEPSFRDQVQNLRKKELKNLLAFSQLQCVVIFVF 550
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,192,304
Number of Sequences: 237096
Number of extensions: 1708748
Number of successful extensions: 3879
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3879
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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