Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0439
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF239610-1|AAF63502.1| 1361|Drosophila melanogaster SP2353 protein.    33   0.55 
AE013599-2167|AAF58071.2| 1361|Drosophila melanogaster CG8403-PA...    33   0.55 
EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin pro...    31   1.7  
BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p pro...    31   1.7  
AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA...    31   1.7  
DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut pr...    29   6.8  
DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker p...    29   6.8  
AY119566-1|AAM50220.1|  517|Drosophila melanogaster HL01481p pro...    29   6.8  
AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB...    29   6.8  
AY089465-1|AAL90203.1|  586|Drosophila melanogaster AT27789p pro...    29   8.9  
AE014297-1388|AAN13533.1|  179|Drosophila melanogaster CG6946-PC...    29   8.9  
AE014297-1387|AAF54705.1|  586|Drosophila melanogaster CG6946-PB...    29   8.9  
AE014297-1386|AAF54704.1|  586|Drosophila melanogaster CG6946-PA...    29   8.9  

>AF239610-1|AAF63502.1| 1361|Drosophila melanogaster SP2353 protein.
          Length = 1361

 Score = 32.7 bits (71), Expect = 0.55
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
 Frame = +2

Query: 8    HQVAARLHEDGHAWLSVDGVDK-SAPATGISNVMNADSNIYIGGIPS---WLNIHGYPGF 175
            H+V A +      +L VDG    +  A G    +N D+ +Y+GG+P    + +   + G 
Sbjct: 1270 HRVRA-IRNSQEGYLEVDGRKTVTLRAPGKLRQLNTDTGLYVGGMPDVGYFTHQRYFSGI 1328

Query: 176  IGCIENV 196
            +GCI  +
Sbjct: 1329 VGCISEI 1335



 Score = 28.7 bits (61), Expect = 8.9
 Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
 Frame = +2

Query: 44  AWLSVDGVDKSAPATGISNV----MNADSNIYIGGIPSW----LNIHGYPGFIGCIENVE 199
           A L+V  VDK      IS+     ++ D N+++GG+       L++   P F+GCI+ ++
Sbjct: 713 ARLAVLKVDKHQEVLTISSNGFWHLSLDQNLFVGGVNHVDRLPLDLKYKPFFVGCIQRID 772

Query: 200 TTDSHRGLNLRDTAVAGRNTQLC 268
             + H  L +   A+ G N   C
Sbjct: 773 -INGH-SLGIVAEALGGSNIGNC 793


>AE013599-2167|AAF58071.2| 1361|Drosophila melanogaster CG8403-PA
            protein.
          Length = 1361

 Score = 32.7 bits (71), Expect = 0.55
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
 Frame = +2

Query: 8    HQVAARLHEDGHAWLSVDGVDK-SAPATGISNVMNADSNIYIGGIPS---WLNIHGYPGF 175
            H+V A +      +L VDG    +  A G    +N D+ +Y+GG+P    + +   + G 
Sbjct: 1270 HRVRA-IRNSQEGYLEVDGRKTVTLRAPGKLRQLNTDTGLYVGGMPDVGYFTHQRYFSGI 1328

Query: 176  IGCIENV 196
            +GCI  +
Sbjct: 1329 VGCISEI 1335



 Score = 28.7 bits (61), Expect = 8.9
 Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
 Frame = +2

Query: 44  AWLSVDGVDKSAPATGISNV----MNADSNIYIGGIPSW----LNIHGYPGFIGCIENVE 199
           A L+V  VDK      IS+     ++ D N+++GG+       L++   P F+GCI+ ++
Sbjct: 713 ARLAVLKVDKHQEVLTISSNGFWHLSLDQNLFVGGVNHVDRLPLDLKYKPFFVGCIQRID 772

Query: 200 TTDSHRGLNLRDTAVAGRNTQLC 268
             + H  L +   A+ G N   C
Sbjct: 773 -INGH-SLGIVAEALGGSNIGNC 793


>EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin
           protein.
          Length = 1840

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = +2

Query: 104 MNADSNIYIGGIPS---WLNIHGYPGFIGCIENVETTDSHRGLNLRDTAVAG 250
           M + S +Y+GG  +    L    +  F+GC+  VE +     LNL D A +G
Sbjct: 482 MLSSSRVYVGGAVNPRALLGARVHTNFVGCLRKVEFSADTLNLNLIDLAKSG 533



 Score = 29.9 bits (64), Expect = 3.9
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 10/61 (16%)
 Frame = +2

Query: 44  AWLSVDGVDKSAPATGISNVMNADSNIYIGGIPSWLNIHGYP----------GFIGCIEN 193
           A +SVDGV       G   ++  D ++Y+GG+    N   +P          GF+GC+ +
Sbjct: 654 AKVSVDGVWNDFRTPGDGTILELDGHMYLGGVGPAYNSVSWPAAIWTATLRQGFVGCLRD 713

Query: 194 V 196
           +
Sbjct: 714 L 714



 Score = 29.1 bits (62), Expect = 6.8
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +2

Query: 8   HQVAARLHEDGHAWLSVDGVDKSAPATGIS---NVMNADSNIYIGGIPSW 148
           H+V   L  D    L VDGV +     G         ++S++Y+GG+P+W
Sbjct: 187 HKVQV-LRNDEQTALIVDGVSQQRSTKGKEFQFGKFASNSDVYVGGMPNW 235


>BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p
           protein.
          Length = 1840

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = +2

Query: 104 MNADSNIYIGGIPS---WLNIHGYPGFIGCIENVETTDSHRGLNLRDTAVAG 250
           M + S +Y+GG  +    L    +  F+GC+  VE +     LNL D A +G
Sbjct: 482 MLSSSRVYVGGAVNPRALLGARVHTNFVGCLRKVEFSADTLNLNLIDLAKSG 533



 Score = 29.9 bits (64), Expect = 3.9
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 10/61 (16%)
 Frame = +2

Query: 44  AWLSVDGVDKSAPATGISNVMNADSNIYIGGIPSWLNIHGYP----------GFIGCIEN 193
           A +SVDGV       G   ++  D ++Y+GG+    N   +P          GF+GC+ +
Sbjct: 654 AKVSVDGVWNDFRTPGDGTILELDGHMYLGGVGPAYNSVSWPAAIWTATLRQGFVGCLRD 713

Query: 194 V 196
           +
Sbjct: 714 L 714



 Score = 29.1 bits (62), Expect = 6.8
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +2

Query: 8   HQVAARLHEDGHAWLSVDGVDKSAPATGIS---NVMNADSNIYIGGIPSW 148
           H+V   L  D    L VDGV +     G         ++S++Y+GG+P+W
Sbjct: 187 HKVQV-LRNDEQTSLIVDGVSQQRSTKGKEFQFGKFASNSDVYVGGMPNW 235


>AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA
           protein.
          Length = 1837

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = +2

Query: 104 MNADSNIYIGGIPS---WLNIHGYPGFIGCIENVETTDSHRGLNLRDTAVAG 250
           M + S +Y+GG  +    L    +  F+GC+  VE +     LNL D A +G
Sbjct: 482 MLSSSRVYVGGAVNPRALLGARVHTNFVGCLRKVEFSADTLNLNLIDLAKSG 533



 Score = 29.9 bits (64), Expect = 3.9
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 10/61 (16%)
 Frame = +2

Query: 44  AWLSVDGVDKSAPATGISNVMNADSNIYIGGIPSWLNIHGYP----------GFIGCIEN 193
           A +SVDGV       G   ++  D ++Y+GG+    N   +P          GF+GC+ +
Sbjct: 654 AKVSVDGVWNDFRTPGDGTILELDGHMYLGGVGPAYNSVSWPAAIWTATLRQGFVGCLRD 713

Query: 194 V 196
           +
Sbjct: 714 L 714



 Score = 29.1 bits (62), Expect = 6.8
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +2

Query: 8   HQVAARLHEDGHAWLSVDGVDKSAPATGIS---NVMNADSNIYIGGIPSW 148
           H+V   L  D    L VDGV +     G         ++S++Y+GG+P+W
Sbjct: 187 HKVQV-LRNDEQTSLIVDGVSQQRSTKGKEFQFGKFASNSDVYVGGMPNW 235


>DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut
            protein.
          Length = 2176

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
 Frame = +2

Query: 47   WLS--VDGVDKSAPATGISNVMNADSNIYIGGIPSWLN-----IHGYP-GFIGCIENVET 202
            WL+  V+G   SA A     ++  DS +YIGG+          I G+P  F GC+  +  
Sbjct: 1794 WLTLWVEGSASSALAPSAEVLVEPDSLLYIGGLKDVSKLPHNAISGFPIPFRGCVRGLVV 1853

Query: 203  TDSHRGLNLRDTAVAGRNTQLC 268
            + +   LN     V  RN + C
Sbjct: 1854 SGTRIVLN-ETNIVESRNIRDC 1874


>DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker
            protein.
          Length = 2165

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
 Frame = +2

Query: 47   WLS--VDGVDKSAPATGISNVMNADSNIYIGGIPSWLN-----IHGYP-GFIGCIENVET 202
            WL+  V+G   SA A     ++  DS +YIGG+          I G+P  F GC+  +  
Sbjct: 1783 WLTLWVEGSASSALAPSAEVLVEPDSLLYIGGLKDVSKLPHNAISGFPIPFRGCVRGLVV 1842

Query: 203  TDSHRGLNLRDTAVAGRNTQLC 268
            + +   LN     V  RN + C
Sbjct: 1843 SGTRIVLN-ETNIVESRNIRDC 1863


>AY119566-1|AAM50220.1|  517|Drosophila melanogaster HL01481p
           protein.
          Length = 517

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
 Frame = +2

Query: 47  WLS--VDGVDKSAPATGISNVMNADSNIYIGGIPSWLN-----IHGYP-GFIGCIENVET 202
           WL+  V+G   SA A     ++  DS +YIGG+          I G+P  F GC+  +  
Sbjct: 135 WLTLWVEGSASSALAPSAEVLVEPDSLLYIGGLKDVSKLPHNAISGFPIPFRGCVRGLVV 194

Query: 203 TDSHRGLNLRDTAVAGRNTQLC 268
           + +   LN     V  RN + C
Sbjct: 195 SGTRIVLN-ETNIVESRNIRDC 215


>AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB
            protein.
          Length = 1984

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
 Frame = +2

Query: 47   WLS--VDGVDKSAPATGISNVMNADSNIYIGGIPSWLN-----IHGYP-GFIGCIENVET 202
            WL+  V+G   SA A     ++  DS +YIGG+          I G+P  F GC+  +  
Sbjct: 1602 WLTLWVEGSASSALAPSAEVLVEPDSLLYIGGLKDVSKLPHNAISGFPIPFRGCVRGLVV 1661

Query: 203  TDSHRGLNLRDTAVAGRNTQLC 268
            + +   LN     V  RN + C
Sbjct: 1662 SGTRIVLN-ETNIVESRNIRDC 1682


>AY089465-1|AAL90203.1|  586|Drosophila melanogaster AT27789p
           protein.
          Length = 586

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +2

Query: 92  ISNVMNADSNIYIGGIPSWLNIHGYPGFIGCIENVETTDSHRGLNLRDTAVAGRNT 259
           I NV  +   + + G+P W   H     +  +ENV  T+   G++L  + V G+NT
Sbjct: 41  IENVGESPKFVRLRGLP-WSATH--KEILDFLENVNVTNGSAGIHLVTSRVDGKNT 93


>AE014297-1388|AAN13533.1|  179|Drosophila melanogaster CG6946-PC,
           isoform C protein.
          Length = 179

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +2

Query: 92  ISNVMNADSNIYIGGIPSWLNIHGYPGFIGCIENVETTDSHRGLNLRDTAVAGRNT 259
           I NV  +   + + G+P W   H     +  +ENV  T+   G++L  + V G+NT
Sbjct: 41  IENVGESPKFVRLRGLP-WSATH--KEILDFLENVNVTNGSAGIHLVTSRVDGKNT 93


>AE014297-1387|AAF54705.1|  586|Drosophila melanogaster CG6946-PB,
           isoform B protein.
          Length = 586

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +2

Query: 92  ISNVMNADSNIYIGGIPSWLNIHGYPGFIGCIENVETTDSHRGLNLRDTAVAGRNT 259
           I NV  +   + + G+P W   H     +  +ENV  T+   G++L  + V G+NT
Sbjct: 41  IENVGESPKFVRLRGLP-WSATH--KEILDFLENVNVTNGSAGIHLVTSRVDGKNT 93


>AE014297-1386|AAF54704.1|  586|Drosophila melanogaster CG6946-PA,
           isoform A protein.
          Length = 586

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +2

Query: 92  ISNVMNADSNIYIGGIPSWLNIHGYPGFIGCIENVETTDSHRGLNLRDTAVAGRNT 259
           I NV  +   + + G+P W   H     +  +ENV  T+   G++L  + V G+NT
Sbjct: 41  IENVGESPKFVRLRGLP-WSATH--KEILDFLENVNVTNGSAGIHLVTSRVDGKNT 93


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,973,372
Number of Sequences: 53049
Number of extensions: 535947
Number of successful extensions: 1254
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)