Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0438
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...   396   e-112
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...   263   1e-72
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...   261   3e-72
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   4.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   9.7  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score =  396 bits (974), Expect = e-112
 Identities = 166/189 (87%), Positives = 178/189 (94%)
 Frame = +2

Query: 5   PTXATXNLQSCPTRSHAVWEMVMNELDRREDPSNDEYLPGCAMVDSCSNILTGDQFYNFL 184
           P     NLQSCPTRSHAVWEMV+NELDRREDP+NDEYLPGCAMVDSCSNILTGDQFYNFL
Sbjct: 346 PHRCHGNLQSCPTRSHAVWEMVLNELDRREDPTNDEYLPGCAMVDSCSNILTGDQFYNFL 405

Query: 185 NHNFDRHYEQNRAPLGLYFHAAWLKNNPEFLEAFLYWIDEILQSHNDVYFVTMTQVIQWV 364
           NHNFDRHYE+NRAPLGLYFHAAWLKNNPEFL+AFLYW+DEIL +HNDVYFVTMTQVIQW+
Sbjct: 406 NHNFDRHYEENRAPLGLYFHAAWLKNNPEFLDAFLYWVDEILANHNDVYFVTMTQVIQWI 465

Query: 365 QNPRTVTEAKNFEPWREKCSVEXNPACWVPHSCKLTSKEVPGETINLQTCLRCPVNYPWL 544
           QNPRT+TE+KNFEPWREKC VE NP CWVPHSCKLTSKEVPGETINLQTC+RCP NYPW+
Sbjct: 466 QNPRTITESKNFEPWREKCVVEGNPHCWVPHSCKLTSKEVPGETINLQTCVRCPNNYPWV 525

Query: 545 NDPTGDGHY 571
           NDPTGDG +
Sbjct: 526 NDPTGDGFF 534



 Score = 25.0 bits (52), Expect = 0.59
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 1   MPHRCHGKPSELPNQ 45
           MPHRCHG     P +
Sbjct: 345 MPHRCHGNLQSCPTR 359


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score =  263 bits (644), Expect = 1e-72
 Identities = 111/187 (59%), Positives = 141/187 (75%)
 Frame = +2

Query: 5   PTXATXNLQSCPTRSHAVWEMVMNELDRREDPSNDEYLPGCAMVDSCSNILTGDQFYNFL 184
           P     N  +CP+RSH VWE+VMNELDRR+DP+ DE LPGC MVDSCSNI TG+QF   L
Sbjct: 338 PHKCNGNAHNCPSRSHPVWEIVMNELDRRDDPTFDESLPGCHMVDSCSNIQTGEQFARLL 397

Query: 185 NHNFDRHYEQNRAPLGLYFHAAWLKNNPEFLEAFLYWIDEILQSHNDVYFVTMTQVIQWV 364
            HNF+RH   NRAPLGL+FHA+WLK+  EF E  + +I+E+LQ  NDVYFVT  QVIQW+
Sbjct: 398 RHNFNRHLNSNRAPLGLHFHASWLKSKKEFKEELIKFIEEMLQ-RNDVYFVTNLQVIQWM 456

Query: 365 QNPRTVTEAKNFEPWREKCSVEXNPACWVPHSCKLTSKEVPGETINLQTCLRCPVNYPWL 544
           QNP  +   ++F+ W+EKC ++  P C +P+SC LT++E+PGET+ L TC+ CP NYPW+
Sbjct: 457 QNPTELNGLRDFQEWKEKCDIKGQPYCSLPNSCALTTRELPGETLRLFTCMECPNNYPWI 516

Query: 545 NDPTGDG 565
            DPTGDG
Sbjct: 517 LDPTGDG 523



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 1   MPHRCHGKPSELPNQ 45
           MPH+C+G     P++
Sbjct: 337 MPHKCNGNAHNCPSR 351


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score =  261 bits (640), Expect = 3e-72
 Identities = 110/187 (58%), Positives = 141/187 (75%)
 Frame = +2

Query: 5   PTXATXNLQSCPTRSHAVWEMVMNELDRREDPSNDEYLPGCAMVDSCSNILTGDQFYNFL 184
           P     N  +CP+RSH VWE+VMNELDRR+DP+ DE LPGC MVDSCSNI TG+QF   L
Sbjct: 345 PHKCNGNAHNCPSRSHPVWEIVMNELDRRDDPTFDESLPGCHMVDSCSNIQTGEQFARLL 404

Query: 185 NHNFDRHYEQNRAPLGLYFHAAWLKNNPEFLEAFLYWIDEILQSHNDVYFVTMTQVIQWV 364
            HNF+RH   NRAPLGL+FHA+WLK+  EF E  + +I+E+LQ  NDVYFVT  QVIQW+
Sbjct: 405 RHNFNRHLNSNRAPLGLHFHASWLKSKKEFKEELIKFIEEMLQ-RNDVYFVTNLQVIQWM 463

Query: 365 QNPRTVTEAKNFEPWREKCSVEXNPACWVPHSCKLTSKEVPGETINLQTCLRCPVNYPWL 544
           QNP  +   ++F+ W+EKC ++  P C +P+SC LT++E+PGET+ L TC+ CP NYPW+
Sbjct: 464 QNPTELNGLRDFQEWKEKCDIKGQPYCSLPNSCALTTRELPGETLRLFTCMECPNNYPWI 523

Query: 545 NDPTGDG 565
            +PTGDG
Sbjct: 524 LEPTGDG 530



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 1   MPHRCHGKPSELPNQ 45
           MPH+C+G     P++
Sbjct: 344 MPHKCNGNAHNCPSR 358


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 89  VCQARSLPFPILRGSWL 39
           VC A  LPF +L+ +W+
Sbjct: 293 VCNAGYLPFILLQVAWI 309


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 387  KPRTSSRGEKSAPSXETLHAGYLIPASS 470
            KP+        +PS   + AGY +PA S
Sbjct: 2475 KPKNLLLSAAVSPSKAVMDAGYDVPALS 2502


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +1

Query: 496 HQFTNLFEMPSQLPLVKRPH 555
           H++T+  ++  + P +KRP+
Sbjct: 292 HKYTHEIKLHDKTPFLKRPY 311


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 25  PSELPNQEPRSMGNGN 72
           PSELP  + R + N N
Sbjct: 77  PSELPALKSRKLNNNN 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,096
Number of Sequences: 336
Number of extensions: 3925
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)