Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0438
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    25   1.7  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   3.0  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.3  

>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 368 NPRTVTEAKNFEPWREKCSVEXNPA 442
           NP   T+ + F  W E C++  NP+
Sbjct: 324 NPGPQTQTEGFYSWAEVCAMLPNPS 348


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +1

Query: 286  LVLDRRDPSKPQRRLLRYHDTSDPM 360
            L    +DP  PQ R   YH T  P+
Sbjct: 1258 LTAQHQDPRGPQGRSTDYHATQQPL 1282


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +1

Query: 454 SFLQAHFKGSSRRNHQFTNLFEMPSQ-LPLVKRPHGRWPLLXSHDLE 591
           ++L+     S R  H F  L  +  Q + +++R  GRW  L   D+E
Sbjct: 804 TYLKIPKDSSIRAGHDF--LLAIQEQCVTVIERQQGRWKALKPFDIE 848


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +1

Query: 454 SFLQAHFKGSSRRNHQFTNLFEMPSQ-LPLVKRPHGRWPLLXSHDLE 591
           ++L+     S R  H F  L  +  Q + +++R  GRW  L   D+E
Sbjct: 805 TYLKIPKDSSIRAGHDF--LLAIQEQCVTVIERQQGRWKALKPFDIE 849


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,876
Number of Sequences: 2352
Number of extensions: 17423
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)