Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0437
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    29   0.048
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    29   0.048
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   2.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.2  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   4.2  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   9.7  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 28.7 bits (61), Expect = 0.048
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = -3

Query: 203 PPPELSHRYEFFLQS--FLRILNQASGVLLGVNRLHSNGHNHILWKSLSTVYLY 48
           P PEL  RY+ F Q+   L +L Q  GV + + R    G     W S +++Y Y
Sbjct: 38  PDPELLDRYDNFYQTTKSLLVLFQIMGV-MPIER-SGKGRTTFRWLSSTSIYAY 89


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 28.7 bits (61), Expect = 0.048
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = -3

Query: 203 PPPELSHRYEFFLQS--FLRILNQASGVLLGVNRLHSNGHNHILWKSLSTVYLY 48
           P PEL  RY+ F Q+   L +L Q  GV + + R    G     W S +++Y Y
Sbjct: 38  PDPELLDRYDNFYQTTKSLLVLFQIMGV-MPIER-SGKGRTTFRWLSSTSIYAY 89


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/62 (20%), Positives = 27/62 (43%)
 Frame = +2

Query: 119 REERQRPGSEYGEMIEEKIRNGEIVPVEVTCSLLHKAMQKSGKERFLIDGFPRNQDNMDG 298
           ++ +++P   Y  +I   IRN              K +  +G   +++  FP  ++N  G
Sbjct: 78  KKSKEKPPYSYNALIMMAIRNSP-----------EKRLTLNGIYEYIMRNFPYYRENKQG 126

Query: 299 WE 304
           W+
Sbjct: 127 WQ 128


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 254 NVLYRISAWPCVIRSK 207
           NV+Y ++AW C I  +
Sbjct: 360 NVVYVVTAWICAITKR 375


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 254 NVLYRISAWPCVIRSK 207
           NV+Y ++AW C I  +
Sbjct: 85  NVVYVVTAWICAITKR 100


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 332 LFVLFFECSREICTERCLR 388
           +F+L+F C        CLR
Sbjct: 329 IFILYFICDEAHYASNCLR 347


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,089
Number of Sequences: 336
Number of extensions: 3467
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)