Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0437
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical pr... 219 1e-57
Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical pr... 213 1e-55
Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical pr... 140 7e-34
AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kin... 140 7e-34
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 93 2e-19
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 93 2e-19
L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical p... 83 2e-16
Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z68342-6|CAD89740.1| 418|Caenorhabditis elegans Hypothetical pr... 36 0.037
Z68342-5|CAA92774.2| 416|Caenorhabditis elegans Hypothetical pr... 36 0.037
Z54271-5|CAA91035.2| 407|Caenorhabditis elegans Hypothetical pr... 31 0.79
AF292046-1|AAG41142.1| 407|Caenorhabditis elegans polynucleotid... 31 0.79
U21317-8|AAA62528.1| 267|Caenorhabditis elegans Hypothetical pr... 29 2.4
U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p... 29 4.2
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein. 29 4.2
U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical pr... 28 5.6
AF016673-3|AAB66122.2| 366|Caenorhabditis elegans Hypothetical ... 28 5.6
AC024214-9|AAF36079.1| 790|Caenorhabditis elegans Calpain famil... 28 7.4
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 27 9.8
>Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical
protein F40F8.1 protein.
Length = 191
Score = 219 bits (536), Expect = 1e-57
Identities = 106/186 (56%), Positives = 128/186 (68%), Gaps = 1/186 (0%)
Frame = +2
Query: 17 VVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIVP 196
VVFVLG PGSGKGT C+ I + +YVHLSAGDLLR ERQR GSE+G +IE I+NG IVP
Sbjct: 4 VVFVLGPPGSGKGTICAKIQENLNYVHLSAGDLLRAERQREGSEFGALIESHIKNGSIVP 63
Query: 197 VEVTCSLLHKAMQKSGKER-FLIDGFPRNQDNMDGWERVMSDKTKLLFVLFFECSREICT 373
VE+TCSLL AM+ G + FL+DGFPRN+DN+ GW + M K + FVLF C IC
Sbjct: 64 VEITCSLLENAMKACGDAKGFLVDGFPRNEDNLQGWNKQMDGKALVQFVLFLSCPVSICI 123
Query: 374 ERCLRRGAAGSGRSDDNIESLKKRFNTYLNDTMPIINYYDKLXLVRRINAEEEPDQVFDK 553
ERCL R G GR+DDN ESLKKR TY T PII +++K LVR + +E D V+
Sbjct: 124 ERCLNR---GQGRTDDNEESLKKRVETYNQQTFPIIEHFEKSGLVREVKSERPVDVVYAD 180
Query: 554 VKVAFD 571
V+ FD
Sbjct: 181 VEKVFD 186
>Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical
protein C29F7.3 protein.
Length = 191
Score = 213 bits (520), Expect = 1e-55
Identities = 102/185 (55%), Positives = 126/185 (68%), Gaps = 1/185 (0%)
Frame = +2
Query: 17 VVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIVP 196
VVFVLG PGSGKGT C+ I + YVHLSAGDLLR ER+R GSEYG +IE I+NG IVP
Sbjct: 4 VVFVLGPPGSGKGTICTQIHENLGYVHLSAGDLLRAERERAGSEYGALIEGHIKNGSIVP 63
Query: 197 VEVTCSLLHKAMQKS-GKERFLIDGFPRNQDNMDGWERVMSDKTKLLFVLFFECSREICT 373
VE+TC+LL AM S FLIDGFPRN+DN GW + M K FVLF C ++C
Sbjct: 64 VEITCALLENAMIASKDANGFLIDGFPRNEDNWSGWNKQMGGKVNEQFVLFLSCPVDVCI 123
Query: 374 ERCLRRGAAGSGRSDDNIESLKKRFNTYLNDTMPIINYYDKLXLVRRINAEEEPDQVFDK 553
+RCL R G GR+DDN+ESLKKR TY T PII +++K+ +VR +N+E +V++
Sbjct: 124 DRCLHR---GQGRTDDNVESLKKRVETYNQSTFPIIEHFEKVGMVREVNSERPVTEVYED 180
Query: 554 VKVAF 568
V F
Sbjct: 181 VVKVF 185
>Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical
protein F38B2.4 protein.
Length = 210
Score = 140 bits (340), Expect = 7e-34
Identities = 77/189 (40%), Positives = 114/189 (60%), Gaps = 3/189 (1%)
Frame = +2
Query: 17 VVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIVP 196
+ F++G PGSGKGTQC I +Y HLS+GDLLR+E + GS G + + +G +VP
Sbjct: 22 IFFIVGGPGSGKGTQCDKIVAKYGLTHLSSGDLLRDE-VKSGSPRGAQLTAIMESGALVP 80
Query: 197 VEVTCSLLHKAMQKS---GKERFLIDGFPRNQDNMDGWERVMSDKTKLLFVLFFECSREI 367
+EV L+ +AM K+ G + FLIDG+PR +E + + KL VLFF+ + E
Sbjct: 81 LEVVLDLVKEAMLKAIEKGSKGFLIDGYPREVAQGQQFESEIQE-AKL--VLFFDVAEET 137
Query: 368 CTERCLRRGAAGSGRSDDNIESLKKRFNTYLNDTMPIINYYDKLXLVRRINAEEEPDQVF 547
+R L R A SGR+DDN +++KKR +T++ T P+++YY+ + RINAE D +F
Sbjct: 138 LVKRLLHR-AQTSGRADDNADTIKKRLHTFVTSTAPVVDYYESKGKLVRINAEGSVDDIF 196
Query: 548 DKVKVAFDE 574
V D+
Sbjct: 197 AVVVANLDK 205
>AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kinase
1 protein.
Length = 210
Score = 140 bits (340), Expect = 7e-34
Identities = 77/189 (40%), Positives = 114/189 (60%), Gaps = 3/189 (1%)
Frame = +2
Query: 17 VVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIVP 196
+ F++G PGSGKGTQC I +Y HLS+GDLLR+E + GS G + + +G +VP
Sbjct: 22 IFFIVGGPGSGKGTQCDKIVAKYGLTHLSSGDLLRDE-VKSGSPRGAQLTAIMESGALVP 80
Query: 197 VEVTCSLLHKAMQKS---GKERFLIDGFPRNQDNMDGWERVMSDKTKLLFVLFFECSREI 367
+EV L+ +AM K+ G + FLIDG+PR +E + + KL VLFF+ + E
Sbjct: 81 LEVVLDLVKEAMLKAIEKGSKGFLIDGYPREVAQGQQFESEIQE-AKL--VLFFDVAEET 137
Query: 368 CTERCLRRGAAGSGRSDDNIESLKKRFNTYLNDTMPIINYYDKLXLVRRINAEEEPDQVF 547
+R L R A SGR+DDN +++KKR +T++ T P+++YY+ + RINAE D +F
Sbjct: 138 LVKRLLHR-AQTSGRADDNADTIKKRLHTFVTSTAPVVDYYESKGKLVRINAEGSVDDIF 196
Query: 548 DKVKVAFDE 574
V D+
Sbjct: 197 AVVVANLDK 205
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical protein
F13E6.2 protein.
Length = 729
Score = 93.1 bits (221), Expect = 2e-19
Identities = 51/189 (26%), Positives = 103/189 (54%), Gaps = 4/189 (2%)
Frame = +2
Query: 17 VVFVLGAPGSGKGTQCSMISKEYD-YVHLSAGDLLREE-RQRPGSEYGEMIEEKIRNGEI 190
V+ VLGAPGS K I+++YD + LS GD+LR++ E + + +K+ NG+
Sbjct: 515 VILVLGAPGSQKNDISRRIAQKYDGFTMLSMGDILRKKINNEKNDEMWDKVSKKMNNGDP 574
Query: 191 VPVEVTCSLLHKAMQKSGKER--FLIDGFPRNQDNMDGWERVMSDKTKLLFVLFFECSRE 364
+P ++ ++L++ + G ++I+G+P++ D + E + +T L ++ +C+ +
Sbjct: 575 IPTKMCRTVLYEELHSRGTSNWGYVIEGYPKSPDQLVDLEHSLQ-RTDLAILI--DCTEQ 631
Query: 365 ICTERCLRRGAAGSGRSDDNIESLKKRFNTYLNDTMPIINYYDKLXLVRRINAEEEPDQV 544
C E +R RSDD+ ++++ R + +T+P++ D +R ++ + +PD V
Sbjct: 632 FCLEVINKRNRENK-RSDDDSDAVRSRMEYFKKNTLPMLKTLDDKGKLRVVDGDADPDTV 690
Query: 545 FDKVKVAFD 571
F +V D
Sbjct: 691 FKEVVQVID 699
Score = 55.6 bits (128), Expect = 3e-08
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 6/190 (3%)
Frame = +2
Query: 8 VPQVVFVLGAPGSGKGTQCSMISK---EYDYVHLSAGDLLREERQRPGSEYGEMIE--EK 172
VP ++F +G PG GK + ++ + VH+ D++R + +Y E E E
Sbjct: 169 VPIILF-MGGPGGGKTRHAARVADSLADNGLVHICMPDIIRTALGKYKDKYPEWKEANEH 227
Query: 173 IRNGEIVPVEVTCSLLHKAMQKSGKER-FLIDGFPRNQDNMDGWERVMSDKTKLLFVLFF 349
GE++P ++ +LL M + F ++G+PR ++ +ER + L + +
Sbjct: 228 YIRGELIPNQLALTLLKAEMGRHPDAMGFFLEGYPREARQVEDFERQVKSVNMALILDYD 287
Query: 350 ECSREICTERCLRRGAAGSGRSDDNIESLKKRFNTYLNDTMPIINYYDKLXLVRRINAEE 529
E E RRG G D I+ K++ T+P Y+D L+ I E+
Sbjct: 288 E---RTLREHMERRGL-GMEIIDQKIKEFKQK-------TLPSAKYFDDQKLLHLIPGEK 336
Query: 530 EPDQVFDKVK 559
+ +++K+K
Sbjct: 337 DDQVIYEKMK 346
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 93.1 bits (221), Expect = 2e-19
Identities = 51/189 (26%), Positives = 103/189 (54%), Gaps = 4/189 (2%)
Frame = +2
Query: 17 VVFVLGAPGSGKGTQCSMISKEYD-YVHLSAGDLLREE-RQRPGSEYGEMIEEKIRNGEI 190
V+ VLGAPGS K I+++YD + LS GD+LR++ E + + +K+ NG+
Sbjct: 515 VILVLGAPGSQKNDISRRIAQKYDGFTMLSMGDILRKKINNEKNDEMWDKVSKKMNNGDP 574
Query: 191 VPVEVTCSLLHKAMQKSGKER--FLIDGFPRNQDNMDGWERVMSDKTKLLFVLFFECSRE 364
+P ++ ++L++ + G ++I+G+P++ D + E + +T L ++ +C+ +
Sbjct: 575 IPTKMCRTVLYEELHSRGTSNWGYVIEGYPKSPDQLVDLEHSLQ-RTDLAILI--DCTEQ 631
Query: 365 ICTERCLRRGAAGSGRSDDNIESLKKRFNTYLNDTMPIINYYDKLXLVRRINAEEEPDQV 544
C E +R RSDD+ ++++ R + +T+P++ D +R ++ + +PD V
Sbjct: 632 FCLEVINKRNRENK-RSDDDSDAVRSRMEYFKKNTLPMLKTLDDKGKLRVVDGDADPDTV 690
Query: 545 FDKVKVAFD 571
F +V D
Sbjct: 691 FKEVVQVID 699
Score = 55.6 bits (128), Expect = 3e-08
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 6/190 (3%)
Frame = +2
Query: 8 VPQVVFVLGAPGSGKGTQCSMISK---EYDYVHLSAGDLLREERQRPGSEYGEMIE--EK 172
VP ++F +G PG GK + ++ + VH+ D++R + +Y E E E
Sbjct: 169 VPIILF-MGGPGGGKTRHAARVADSLADNGLVHICMPDIIRTALGKYKDKYPEWKEANEH 227
Query: 173 IRNGEIVPVEVTCSLLHKAMQKSGKER-FLIDGFPRNQDNMDGWERVMSDKTKLLFVLFF 349
GE++P ++ +LL M + F ++G+PR ++ +ER + L + +
Sbjct: 228 YIRGELIPNQLALTLLKAEMGRHPDAMGFFLEGYPREARQVEDFERQVKSVNMALILDYD 287
Query: 350 ECSREICTERCLRRGAAGSGRSDDNIESLKKRFNTYLNDTMPIINYYDKLXLVRRINAEE 529
E E RRG G D I+ K++ T+P Y+D L+ I E+
Sbjct: 288 E---RTLREHMERRGL-GMEIIDQKIKEFKQK-------TLPSAKYFDDQKLLHLIPGEK 336
Query: 530 EPDQVFDKVK 559
+ +++K+K
Sbjct: 337 DDQVIYEKMK 346
>L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical
protein C29E4.8 protein.
Length = 251
Score = 83.0 bits (196), Expect = 2e-16
Identities = 60/184 (32%), Positives = 92/184 (50%), Gaps = 28/184 (15%)
Frame = +2
Query: 29 LGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIVPVEVT 208
+G PGSGKGTQ +++Y HL+ GDLLR E GSE+G+ ++ + G++V EV
Sbjct: 32 IGPPGSGKGTQAPAFAQKYFSCHLATGDLLRAE-VASGSEFGKELKATMDAGKLVSDEVV 90
Query: 209 CSLLHKAMQK-SGKERFLIDGFPRNQDNMDGWERVMS-DKTKLLFVLFFECSREICTERC 382
C L+ + ++K K F++DGFPR + + ++ KT L V+ F + ++ R
Sbjct: 91 CKLIEQKLEKPECKYGFILDGFPRTSGQAEKLDEILERRKTPLDTVVEFNIADDLLVRRI 150
Query: 383 L-RRGAAGSGR-------------------------SDDNIESLKKRFNTYLNDTMPIIN 484
R SGR SDDN E+L+KR Y T+P+++
Sbjct: 151 TGRLFHIASGRSYHLEFKPPKVPMKDDLTGEPLIRRSDDNEETLRKRLVQYHQMTVPLVD 210
Query: 485 YYDK 496
YY K
Sbjct: 211 YYKK 214
>Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical
protein ZK673.2 protein.
Length = 222
Score = 59.7 bits (138), Expect = 2e-09
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Frame = +2
Query: 20 VFVLGAPGSGKGTQCSMISKEYD---YVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEI 190
V + GA GSGKGT M+ +E++ + + +AGD +R+ R G+E+G + + GE
Sbjct: 4 VLLSGAAGSGKGTIARMLVREFEPLGFNYFAAGDFIRDHIAR-GTEFGVRAQSFLNKGEH 62
Query: 191 VPVEVTCSLLHKAMQKSGKERFLIDGFPRNQDNMDGWERVMSDKTKLLFVLFFECSREIC 370
VP + + M K+G R ++DG+PRN + +++ ++ L ++ + R++
Sbjct: 63 VPDSILNGAILAEMLKAG-PRVVLDGYPRNMSQL----KMVEEQAPLNLIVELKVPRKVL 117
Query: 371 TER 379
+R
Sbjct: 118 IDR 120
>Z68342-6|CAD89740.1| 418|Caenorhabditis elegans Hypothetical
protein F38E11.6b protein.
Length = 418
Score = 35.5 bits (78), Expect = 0.037
Identities = 36/178 (20%), Positives = 80/178 (44%), Gaps = 11/178 (6%)
Frame = +2
Query: 17 VVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLRE---ERQRPGSEYGEMIEEKIRNGE 187
+VF+ G P S KG+ ++ +++ +S D++ + R + I++ +RN E
Sbjct: 44 IVFIFGGPASQKGSIIEELTSSFNFTSISVEDIVFQYFPSRLSGSGTQIKDIQDALRNDE 103
Query: 188 -IVPVEVTCSLLHKAMQKSGKERFLIDGFPRNQDNMDGWE-RVMS-----DKTKLLFVLF 346
++ ++ ++ ++ + +RF++D P + E R S ++ ++ +
Sbjct: 104 GMLSIDWVLEMISSRIKMTMNQRFVVDIVPAVSSILKAEEYRARSHDRQLNQFEMKHPIS 163
Query: 347 FECSREICTERCLRR-GAAGSGRSDDNIESLKKRFNTYLNDTMPIINYYDKLXLVRRI 517
F + E+ L + +G+ +D+ KR N LN M + D+ L +RI
Sbjct: 164 FAIDVTVKDEQALTKLNGEANGKDEDS-----KRINPELNQMMRGADDIDRGKLEKRI 216
>Z68342-5|CAA92774.2| 416|Caenorhabditis elegans Hypothetical
protein F38E11.6a protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.037
Identities = 36/178 (20%), Positives = 80/178 (44%), Gaps = 11/178 (6%)
Frame = +2
Query: 17 VVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLRE---ERQRPGSEYGEMIEEKIRNGE 187
+VF+ G P S KG+ ++ +++ +S D++ + R + I++ +RN E
Sbjct: 44 IVFIFGGPASQKGSIIEELTSSFNFTSISVEDIVFQYFPSRLSGSGTQIKDIQDALRNDE 103
Query: 188 -IVPVEVTCSLLHKAMQKSGKERFLIDGFPRNQDNMDGWE-RVMS-----DKTKLLFVLF 346
++ ++ ++ ++ + +RF++D P + E R S ++ ++ +
Sbjct: 104 GMLSIDWVLEMISSRIKMTMNQRFVVDIVPAVSSILKAEEYRARSHDRQLNQFEMKHPIS 163
Query: 347 FECSREICTERCLRR-GAAGSGRSDDNIESLKKRFNTYLNDTMPIINYYDKLXLVRRI 517
F + E+ L + +G+ +D+ KR N LN M + D+ L +RI
Sbjct: 164 FAIDVTVKDEQALTKLNGEANGKDEDS-----KRINPELNQMMRGADDIDRGKLEKRI 216
>Z54271-5|CAA91035.2| 407|Caenorhabditis elegans Hypothetical
protein F21D5.5 protein.
Length = 407
Score = 31.1 bits (67), Expect = 0.79
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 14 QVVFVLGAPGSGKGTQCSMISKEYDY 91
+++ ++G PGSGK T M+ ++DY
Sbjct: 251 EIILMVGFPGSGKSTFAKMLGHQHDY 276
>AF292046-1|AAG41142.1| 407|Caenorhabditis elegans polynucleotide
kinase 3' phosphataseprotein.
Length = 407
Score = 31.1 bits (67), Expect = 0.79
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 14 QVVFVLGAPGSGKGTQCSMISKEYDY 91
+++ ++G PGSGK T M+ ++DY
Sbjct: 251 EIILMVGFPGSGKSTFAKMLGHQHDY 276
>U21317-8|AAA62528.1| 267|Caenorhabditis elegans Hypothetical
protein B0495.9 protein.
Length = 267
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +2
Query: 20 VFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEI--- 190
++VL G T M+S+ + SA L E+ RPG I++ +++GE+
Sbjct: 101 IYVLAVAGLSFVTSFIMLSQMFTGDRNSADGLTNEDFTRPGIPMKTFIDKYLKHGEVQRI 160
Query: 191 --VPVEV-TCSLLHKAMQKSGK---ERFLIDGFPRN 280
VP ++LH+ GK E +I +P+N
Sbjct: 161 VFVPNNSRAIAILHRGAVIDGKAASEASVIVEYPQN 196
>U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical
protein C10G11.9 protein.
Length = 203
Score = 29.1 bits (62), Expect = 3.2
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = -2
Query: 399 AAPRLKHLSVHISREHSKNKTKSSLVLSDMTRSQPSILS*LRGKPSMRKRSLPDFCMALC 220
+A R S + R S+ + S+ S T PS++ + G PS R+R P +
Sbjct: 40 SASRGARQSRSVGRPMSRRNSVRSI--STHTAKSPSLVLVISGSPSPRRRR-PSTRRSSS 96
Query: 219 NKEQVTSTGTISPLRIFSSIISPYSEPGLWRSS-RSKS 109
+ V S S R SS S Y G RSS RS+S
Sbjct: 97 RRSVVRSVSRGSKSRRSSSRGSVYGRTGRSRSSKRSRS 134
>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
protein F43G9.6 protein.
Length = 2034
Score = 28.7 bits (61), Expect = 4.2
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +2
Query: 71 ISKEYDYVHLSAGDLLREERQRPGSEYGEMIEE-KIRNGEIVPV--EVTCSLLHKAMQKS 241
I K Y Y + + + + G E G IE+ E++ V ++L+ QK+
Sbjct: 1506 ILKSYCYKMMLSVPKIESRQTERGEEKGITIEKITFWFSEVLHVFENEEIAMLNSQRQKA 1565
Query: 242 GKERFLIDGFPRNQDNMDG-WERVMSDKTK 328
GKE F +N+D DG W+ ++ K
Sbjct: 1566 GKENFSDGSDQQNEDVSDGSWDEEDLEREK 1595
>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
Length = 2034
Score = 28.7 bits (61), Expect = 4.2
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +2
Query: 71 ISKEYDYVHLSAGDLLREERQRPGSEYGEMIEE-KIRNGEIVPV--EVTCSLLHKAMQKS 241
I K Y Y + + + + G E G IE+ E++ V ++L+ QK+
Sbjct: 1506 ILKSYCYKMMLSVPKIESRQTERGEEKGITIEKITFWFSEVLHVFENEEIAMLNSQRQKA 1565
Query: 242 GKERFLIDGFPRNQDNMDG-WERVMSDKTK 328
GKE F +N+D DG W+ ++ K
Sbjct: 1566 GKENFSDGSDQQNEDVSDGSWDEEDLEREK 1595
>U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical
protein T27A3.4 protein.
Length = 203
Score = 28.3 bits (60), Expect = 5.6
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = -2
Query: 399 AAPRLKHLSVHISREHSKNKTKSSLVLSDMTRSQPSILS*LRGKPSMRKRSLPDFCMALC 220
+A R S + R S+ + S+ S T PS++ + G PS R+R P +
Sbjct: 40 SASRGARQSRSVGRPMSRRNSVRSI--STHTAKSPSLVLVISGSPSPRRRR-PSTRRSSS 96
Query: 219 NKEQVTSTGTISPLRIFSSIISPYSEPGLWRSS-RSKS 109
+ V S S R SS S Y G RSS RS+S
Sbjct: 97 RRSVVRSVSRGSKGRRSSSRGSVYGRTGRSRSSKRSRS 134
>AF016673-3|AAB66122.2| 366|Caenorhabditis elegans Hypothetical
protein T06D4.2 protein.
Length = 366
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = -2
Query: 456 YVLNLFFKLSMLSSLR-PLPAAPRLKHLSVHISREHSKNKTKSSLV 322
+VLNL L++L LR P RLK V+ISR+ SK+K +++
Sbjct: 314 FVLNLE-PLALLGELRVPQVGQDRLKSAMVNISRQISKHKDLIAMI 358
>AC024214-9|AAF36079.1| 790|Caenorhabditis elegans Calpain family
protein 6 protein.
Length = 790
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 374 ERCLRRGAAGSGRSDDNIESLKKRFNTYLNDTMPIINYYDKLXLVRRI 517
E C R+G AG +++N ++ TY T P N DK ++ +
Sbjct: 483 EWCSRKGTAGGCSNNENTFCTNPQYETYFRATSPSSN--DKCTVIAAV 528
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 27.5 bits (58), Expect = 9.8
Identities = 26/117 (22%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Frame = +2
Query: 218 LHKAMQKSGKERFLIDGFPRNQDNMDGWERVMSDKTKL-LFVLFFECSREI-CTERCLRR 391
L + S +E+ L+ + +NQ WE + +T + + LF+ ++I C + +
Sbjct: 472 LKNRLNLSKEEKELVSSYMKNQGPQKKWENMPLHETSIRINSLFYVDGKKIDCGTDQIGK 531
Query: 392 GAAGSGRSDDNIESLKKRFNTYLNDTMPIINYYDKLXLVRRINAEEEPDQVFDKVKV 562
GA G+ + K +F L +++P+ KL L R ++++E + F ++++
Sbjct: 532 GAFGTVK--------KGKFRNSLGESVPVA--VKKLGL--RESSKDERNPAFSEMEI 576
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,650,645
Number of Sequences: 27780
Number of extensions: 338276
Number of successful extensions: 1086
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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