Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0435
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    24   1.5  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    23   3.4  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   3.4  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   3.4  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    22   4.6  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    22   4.6  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   6.0  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   6.0  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   8.0  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 93  LLPAVLPNVCVKCTDADK 146
           +LP  L   C KCTD  K
Sbjct: 65  VLPDALKTSCAKCTDKQK 82


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 96  LPAVLPNVCVKCTDADK 146
           +P  L N C KC D  K
Sbjct: 62  IPDALKNECAKCNDKHK 78


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/26 (26%), Positives = 17/26 (65%)
 Frame = -2

Query: 125 DAYVRKYGREKAGPYCKSISL*IVSV 48
           D+Y++ Y +EK   +C+ +   I+++
Sbjct: 23  DSYLKIYHKEKYRKFCRILKYFIIAI 48


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +2

Query: 437 HQDWV*ILRQIRGPNHQYHQRLEKY 511
           H D+   L QIR     YHQ LEKY
Sbjct: 144 HSDYRAKLAQIR---QIYHQELEKY 165


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 119 YVRKYGREKAGPYCKSISL 63
           Y   YG  +AGPY +++ +
Sbjct: 280 YAATYGGSEAGPYTRAMGV 298



 Score = 21.4 bits (43), Expect = 8.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 220 VSTDRIISACLLGTLNS*LSPMSLGLSASV 131
           V  D++    LLG L S L+   + LSA+V
Sbjct: 152 VDEDKVNFVTLLGELKSALNAKGMILSAAV 181


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 220 VSTDRIISACLLGTLNS*LSPMSLGLSASV 131
           V  D++    LLG L S L+   L LSA+V
Sbjct: 152 VDEDKVNFVTLLGELKSALNAKGLILSAAV 181



 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 119 YVRKYGREKAGPYCKSISL 63
           Y   YG  +AGPY +++ +
Sbjct: 280 YAATYGGSEAGPYTRAMGV 298


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 716 SGVPVISDVVPAH 678
           + VPV+ DV+P H
Sbjct: 14  NNVPVVLDVIPPH 26


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = -3

Query: 550 NDCLLASMLLNPYVFFKSLMILMIWSSYLSKDSYPVLMVGMLL*RSLS 407
           N C   S  +N  +F   +++L+++ +YL   S  V M    + RS +
Sbjct: 106 NCCSKKSFRMNFAIFNLYMVLLLLFDAYLWISSVGVRMFQYYIGRSFT 153


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 96  LPAVLPNVCVKCTDADK 146
           +P  L N C KC +  K
Sbjct: 64  IPEALQNECAKCNEKHK 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,416
Number of Sequences: 336
Number of extensions: 4241
Number of successful extensions: 24
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)