Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0435
(750 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ... 56 4e-08
BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p pro... 56 4e-08
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA... 56 4e-08
BT001374-1|AAN71129.1| 697|Drosophila melanogaster GH01059p pro... 29 5.1
AY089558-1|AAL90296.1| 1063|Drosophila melanogaster LD45706p pro... 29 5.1
AJ249178-1|CAB53566.1| 1063|Drosophila melanogaster chromosomal ... 29 5.1
AF190557-1|AAF01341.1| 1063|Drosophila melanogaster chromosomal ... 29 5.1
AF179361-2|AAD55780.1| 1063|Drosophila melanogaster embargoed pr... 29 5.1
AF179360-1|AAD55778.1| 1063|Drosophila melanogaster embargoed pr... 29 5.1
AE014134-1501|AAG22423.2| 1063|Drosophila melanogaster CG13387-P... 29 5.1
>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
acid-bindingglycoprotein protein.
Length = 3351
Score = 56.4 bits (130), Expect = 4e-08
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Frame = +3
Query: 105 VLPNVCVKCTDADKPRDIGDSYEFKVPNKQADIILSVETTESNAKTYKDIVVPLVSHLID 284
+LP C+KC D GD + K+PN + D++ V+ + +++ P ++ + +
Sbjct: 3029 LLPPRCIKCAGPAGQHDFGDEFTVKLPNNKVDVVFVVDINVTPG-VLSNLIAPAINDIRE 3087
Query: 285 SLKSKHITDVKVFLVGHTSKYPYPILYDTDLKLKNAHVHFDDKERYNNIPTIKTGYESFD 464
SL+S+ +DV+V ++ YP L +D +++ + IK+ ++
Sbjct: 3088 SLRSRGFSDVQVGVIVFEETKRYPALLTSD----GGKINYKGNVADVKLAGIKSFCDNCV 3143
Query: 465 KY---EDQIISIINDLKN-TYGF--NNIEASKQSLFDLPVRPGAIKHLV 593
+ E +I+ I N LK G E + Q D P R GA K ++
Sbjct: 3144 EQIITEKRILDIYNSLKEIVKGIAPQADEKAFQLALDYPFRAGAAKSII 3192
>BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p protein.
Length = 1074
Score = 56.4 bits (130), Expect = 4e-08
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Frame = +3
Query: 105 VLPNVCVKCTDADKPRDIGDSYEFKVPNKQADIILSVETTESNAKTYKDIVVPLVSHLID 284
+LP C+KC D GD + K+PN + D++ V+ + +++ P ++ + +
Sbjct: 752 LLPPRCIKCAGPAGQHDFGDEFTVKLPNNKVDVVFVVDINVTPG-VLSNLIAPAINDIRE 810
Query: 285 SLKSKHITDVKVFLVGHTSKYPYPILYDTDLKLKNAHVHFDDKERYNNIPTIKTGYESFD 464
SL+S+ +DV+V ++ YP L +D +++ + IK+ ++
Sbjct: 811 SLRSRGFSDVQVGVIVFEETKRYPALLTSD----GGKINYKGNVADVKLAGIKSFCDNCV 866
Query: 465 KY---EDQIISIINDLKN-TYGF--NNIEASKQSLFDLPVRPGAIKHLV 593
+ E +I+ I N LK G E + Q D P R GA K ++
Sbjct: 867 EQIITEKRILDIYNSLKEIVKGIAPQADEKAFQLALDYPFRAGAAKSII 915
>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
protein.
Length = 3351
Score = 56.4 bits (130), Expect = 4e-08
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Frame = +3
Query: 105 VLPNVCVKCTDADKPRDIGDSYEFKVPNKQADIILSVETTESNAKTYKDIVVPLVSHLID 284
+LP C+KC D GD + K+PN + D++ V+ + +++ P ++ + +
Sbjct: 3029 LLPPRCIKCAGPAGQHDFGDEFTVKLPNNKVDVVFVVDINVTPG-VLSNLIAPAINDIRE 3087
Query: 285 SLKSKHITDVKVFLVGHTSKYPYPILYDTDLKLKNAHVHFDDKERYNNIPTIKTGYESFD 464
SL+S+ +DV+V ++ YP L +D +++ + IK+ ++
Sbjct: 3088 SLRSRGFSDVQVGVIVFEETKRYPALLTSD----GGKINYKGNVADVKLAGIKSFCDNCV 3143
Query: 465 KY---EDQIISIINDLKN-TYGF--NNIEASKQSLFDLPVRPGAIKHLV 593
+ E +I+ I N LK G E + Q D P R GA K ++
Sbjct: 3144 EQIITEKRILDIYNSLKEIVKGIAPQADEKAFQLALDYPFRAGAAKSII 3192
>BT001374-1|AAN71129.1| 697|Drosophila melanogaster GH01059p
protein.
Length = 697
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +1
Query: 73 DLQYGPAFSLPYFRTYASSVLMQISRGTSEIAMNSKFPTNRLILSY 210
+L P + +++TY + +LMQI ++ + + P + +IL+Y
Sbjct: 530 NLDQHPGAAQSFYQTYFTDILMQIFSVVTDTSHTAGLPNHAIILAY 575
>AY089558-1|AAL90296.1| 1063|Drosophila melanogaster LD45706p protein.
Length = 1063
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +1
Query: 73 DLQYGPAFSLPYFRTYASSVLMQISRGTSEIAMNSKFPTNRLILSY 210
+L P + +++TY + +LMQI ++ + + P + +IL+Y
Sbjct: 896 NLDQHPGAAQSFYQTYFTDILMQIFSVVTDTSHTAGLPNHAIILAY 941
>AJ249178-1|CAB53566.1| 1063|Drosophila melanogaster chromosomal
region maintenance1 protein protein.
Length = 1063
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +1
Query: 73 DLQYGPAFSLPYFRTYASSVLMQISRGTSEIAMNSKFPTNRLILSY 210
+L P + +++TY + +LMQI ++ + + P + +IL+Y
Sbjct: 896 NLDQHPGAAQSFYQTYFTDILMQIFSVVTDTSHTAGLPNHAIILAY 941
>AF190557-1|AAF01341.1| 1063|Drosophila melanogaster chromosomal
region maintenanceprotein CRM1 protein.
Length = 1063
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +1
Query: 73 DLQYGPAFSLPYFRTYASSVLMQISRGTSEIAMNSKFPTNRLILSY 210
+L P + +++TY + +LMQI ++ + + P + +IL+Y
Sbjct: 896 NLDQHPGAAQSFYQTYFTDILMQIFSVVTDTSHTAGLPNHAIILAY 941
>AF179361-2|AAD55780.1| 1063|Drosophila melanogaster embargoed
protein.
Length = 1063
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +1
Query: 73 DLQYGPAFSLPYFRTYASSVLMQISRGTSEIAMNSKFPTNRLILSY 210
+L P + +++TY + +LMQI ++ + + P + +IL+Y
Sbjct: 896 NLDQHPGAAQSFYQTYFTDILMQIFSVVTDTSHTAGLPNHAIILAY 941
>AF179360-1|AAD55778.1| 1063|Drosophila melanogaster embargoed
protein.
Length = 1063
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +1
Query: 73 DLQYGPAFSLPYFRTYASSVLMQISRGTSEIAMNSKFPTNRLILSY 210
+L P + +++TY + +LMQI ++ + + P + +IL+Y
Sbjct: 896 NLDQHPGAAQSFYQTYFTDILMQIFSVVTDTSHTAGLPNHAIILAY 941
>AE014134-1501|AAG22423.2| 1063|Drosophila melanogaster CG13387-PA
protein.
Length = 1063
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +1
Query: 73 DLQYGPAFSLPYFRTYASSVLMQISRGTSEIAMNSKFPTNRLILSY 210
+L P + +++TY + +LMQI ++ + + P + +IL+Y
Sbjct: 896 NLDQHPGAAQSFYQTYFTDILMQIFSVVTDTSHTAGLPNHAIILAY 941
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,410,542
Number of Sequences: 53049
Number of extensions: 780549
Number of successful extensions: 2606
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2605
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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