Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0434
         (472 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.3  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   5.7  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   5.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   5.7  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   7.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   7.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 15  VCNLYSVSCLWICTILYR 68
           V  L  ++ +WICT++ R
Sbjct: 726 VSGLVYIATVWICTLMNR 743


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 312 IQSQFIRIFLLFAQFNL 262
           + SQFI  FLLFA   +
Sbjct: 140 LYSQFILYFLLFATLKI 156


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 312 IQSQFIRIFLLFAQFNL 262
           + SQFI  FLLFA   +
Sbjct: 140 LYSQFILYFLLFATLKI 156


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 312 IQSQFIRIFLLFAQFNL 262
           + SQFI  FLLFA   +
Sbjct: 460 LYSQFILYFLLFATLKI 476


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 27  YSVSCLWICTILYRYC 74
           YS     I TIL RYC
Sbjct: 62  YSTPLAKITTILQRYC 77


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 27  YSVSCLWICTILYRYC 74
           YS     I TIL RYC
Sbjct: 58  YSTPLAKITTILQRYC 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,393
Number of Sequences: 336
Number of extensions: 2024
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)