Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0434
         (472 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g06070.1 68414.m00636 bZIP transcription factor, putative (bZ...    28   2.8  
At2g31370.3 68415.m03832 bZIP transcription factor (POSF21) iden...    27   8.5  
At2g31370.2 68415.m03834 bZIP transcription factor (POSF21) iden...    27   8.5  
At2g31370.1 68415.m03833 bZIP transcription factor (POSF21) iden...    27   8.5  
At2g22720.2 68415.m02691 expressed protein                             27   8.5  

>At1g06070.1 68414.m00636 bZIP transcription factor, putative
           (bZIP69) similar to transcriptional activator RF2a
           GB:AF005492 GI:2253277 from [Oryza sativa]; contains
           Pfam profile PF00170: bZIP transcription factor
          Length = 423

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -3

Query: 146 KRLHSESLTVPIALSYESSISLINA 72
           +R HSE LT+P  LS++S + ++ A
Sbjct: 74  RRAHSEILTLPDDLSFDSDLGVVGA 98


>At2g31370.3 68415.m03832 bZIP transcription factor (POSF21)
           identical to GB:Q04088
          Length = 279

 Score = 26.6 bits (56), Expect = 8.5
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 146 KRLHSESLTVPIALSYESSISLI 78
           +R HSE LT+P  LS++S + ++
Sbjct: 59  RRAHSEILTLPDDLSFDSDLGVV 81


>At2g31370.2 68415.m03834 bZIP transcription factor (POSF21)
           identical to GB:Q04088
          Length = 398

 Score = 26.6 bits (56), Expect = 8.5
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 146 KRLHSESLTVPIALSYESSISLI 78
           +R HSE LT+P  LS++S + ++
Sbjct: 59  RRAHSEILTLPDDLSFDSDLGVV 81


>At2g31370.1 68415.m03833 bZIP transcription factor (POSF21)
           identical to GB:Q04088
          Length = 398

 Score = 26.6 bits (56), Expect = 8.5
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 146 KRLHSESLTVPIALSYESSISLI 78
           +R HSE LT+P  LS++S + ++
Sbjct: 59  RRAHSEILTLPDDLSFDSDLGVV 81


>At2g22720.2 68415.m02691 expressed protein
          Length = 672

 Score = 26.6 bits (56), Expect = 8.5
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -2

Query: 420 YPFVFIYHSLFLSETILLQSLQNSVKREPADIQDVFIQSQFIR 292
           YPF+ +   L    +IL    Q+ V   P+D  D+F  S F R
Sbjct: 53  YPFLSLRSFLSSLRSILSSPSQSFVLSSPSDSSDIFDFSSFHR 95


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,596,235
Number of Sequences: 28952
Number of extensions: 152945
Number of successful extensions: 301
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 301
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 801831960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)