Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0432
         (625 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.7  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.8  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   8.4  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/49 (24%), Positives = 17/49 (34%)
 Frame = -1

Query: 208 YLDFARFF*VSSDSFNNLVLFNILYCDGTHIFTSPCRSKLLFYCYESFI 62
           YL F R    S   F     F   +          C + ++FYC E  +
Sbjct: 34  YLPFIRALGKSKKEFKTRTYFIYAFVAPVKCLAFFCTALVIFYCQEGSV 82


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/49 (24%), Positives = 17/49 (34%)
 Frame = -1

Query: 208 YLDFARFF*VSSDSFNNLVLFNILYCDGTHIFTSPCRSKLLFYCYESFI 62
           YL F R    S   F     F   +          C + ++FYC E  +
Sbjct: 267 YLPFIRALGKSKKEFKTRTYFIYAFVAPVKCLAFFCTALVIFYCQEGSV 315


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/49 (24%), Positives = 17/49 (34%)
 Frame = -1

Query: 208 YLDFARFF*VSSDSFNNLVLFNILYCDGTHIFTSPCRSKLLFYCYESFI 62
           YL F R    S   F     F   +          C + ++FYC E  +
Sbjct: 267 YLPFIRALGKSKKEFKTRTYFIYAFVAPVKCLAFFCTALVIFYCQEGSV 315


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
          monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 88 LFYCYESFIVAVYSRI 41
          LFYCY++    +YS I
Sbjct: 19 LFYCYKTIKQHIYSLI 34


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
          monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 88 LFYCYESFIVAVYSRI 41
          LFYCY++    +YS I
Sbjct: 19 LFYCYKTIKQHIYSLI 34


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 11/44 (25%), Positives = 18/44 (40%)
 Frame = -3

Query: 398 CRNVKV*LHYVCAHQRSW*QS*LQQVSECKYDEGWQHNAHRTNQ 267
           C N++      C+    W    L +  +C Y EGW   +   +Q
Sbjct: 200 CDNLQYSFDNQCSGTIDWA---LPKQEDCFYQEGWNGQSFDVSQ 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,913
Number of Sequences: 336
Number of extensions: 2533
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)