Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0432
         (625 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M81757-1|AAA89070.1|  145|Homo sapiens S19 ribosomal protein pro...   175   8e-44
BC018616-1|AAH18616.1|  145|Homo sapiens ribosomal protein S19 p...   175   8e-44
BC007615-1|AAH07615.1|  145|Homo sapiens ribosomal protein S19 p...   175   8e-44
BC000023-1|AAH00023.1|  145|Homo sapiens ribosomal protein S19 p...   175   8e-44
AF092907-1|AAD13668.1|  145|Homo sapiens ribosomal protein S19 p...   175   8e-44
BC017386-1|AAH17386.1|  157|Homo sapiens ribosomal protein S19 p...   174   2e-43
AB209470-1|BAD92707.1|  249|Homo sapiens proteasome beta 2 subun...    30   7.6  

>M81757-1|AAA89070.1|  145|Homo sapiens S19 ribosomal protein
           protein.
          Length = 145

 Score =  175 bits (427), Expect = 8e-44
 Identities = 83/134 (61%), Positives = 102/134 (76%)
 Frame = +2

Query: 119 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPXHMDLVKTARFKELAPYDPDWFYVRCAAI 298
           M  VTVKDV Q + V+ +AA LKK+GK+KVP  +D VK A+ KELAPYD +WFY R A+ 
Sbjct: 1   MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60

Query: 299 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARXALQSLEALKLVEKVQDGG 478
            RH+Y+R   GV ++TKI+GGR+RNGV PSHF R S S+AR  LQ+LE LK+VEK QDGG
Sbjct: 61  ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120

Query: 479 RILTTQXRRDLDRI 520
           R LT Q +RDLDRI
Sbjct: 121 RKLTPQGQRDLDRI 134


>BC018616-1|AAH18616.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  175 bits (427), Expect = 8e-44
 Identities = 83/134 (61%), Positives = 102/134 (76%)
 Frame = +2

Query: 119 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPXHMDLVKTARFKELAPYDPDWFYVRCAAI 298
           M  VTVKDV Q + V+ +AA LKK+GK+KVP  +D VK A+ KELAPYD +WFY R A+ 
Sbjct: 1   MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60

Query: 299 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARXALQSLEALKLVEKVQDGG 478
            RH+Y+R   GV ++TKI+GGR+RNGV PSHF R S S+AR  LQ+LE LK+VEK QDGG
Sbjct: 61  ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120

Query: 479 RILTTQXRRDLDRI 520
           R LT Q +RDLDRI
Sbjct: 121 RKLTPQGQRDLDRI 134


>BC007615-1|AAH07615.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  175 bits (427), Expect = 8e-44
 Identities = 83/134 (61%), Positives = 102/134 (76%)
 Frame = +2

Query: 119 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPXHMDLVKTARFKELAPYDPDWFYVRCAAI 298
           M  VTVKDV Q + V+ +AA LKK+GK+KVP  +D VK A+ KELAPYD +WFY R A+ 
Sbjct: 1   MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60

Query: 299 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARXALQSLEALKLVEKVQDGG 478
            RH+Y+R   GV ++TKI+GGR+RNGV PSHF R S S+AR  LQ+LE LK+VEK QDGG
Sbjct: 61  ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120

Query: 479 RILTTQXRRDLDRI 520
           R LT Q +RDLDRI
Sbjct: 121 RKLTPQGQRDLDRI 134


>BC000023-1|AAH00023.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  175 bits (427), Expect = 8e-44
 Identities = 83/134 (61%), Positives = 102/134 (76%)
 Frame = +2

Query: 119 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPXHMDLVKTARFKELAPYDPDWFYVRCAAI 298
           M  VTVKDV Q + V+ +AA LKK+GK+KVP  +D VK A+ KELAPYD +WFY R A+ 
Sbjct: 1   MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60

Query: 299 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARXALQSLEALKLVEKVQDGG 478
            RH+Y+R   GV ++TKI+GGR+RNGV PSHF R S S+AR  LQ+LE LK+VEK QDGG
Sbjct: 61  ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120

Query: 479 RILTTQXRRDLDRI 520
           R LT Q +RDLDRI
Sbjct: 121 RKLTPQGQRDLDRI 134


>AF092907-1|AAD13668.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  175 bits (427), Expect = 8e-44
 Identities = 83/134 (61%), Positives = 102/134 (76%)
 Frame = +2

Query: 119 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPXHMDLVKTARFKELAPYDPDWFYVRCAAI 298
           M  VTVKDV Q + V+ +AA LKK+GK+KVP  +D VK A+ KELAPYD +WFY R A+ 
Sbjct: 1   MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60

Query: 299 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARXALQSLEALKLVEKVQDGG 478
            RH+Y+R   GV ++TKI+GGR+RNGV PSHF R S S+AR  LQ+LE LK+VEK QDGG
Sbjct: 61  ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120

Query: 479 RILTTQXRRDLDRI 520
           R LT Q +RDLDRI
Sbjct: 121 RKLTPQGQRDLDRI 134


>BC017386-1|AAH17386.1|  157|Homo sapiens ribosomal protein S19
           protein.
          Length = 157

 Score =  174 bits (424), Expect = 2e-43
 Identities = 82/131 (62%), Positives = 101/131 (77%)
 Frame = +2

Query: 128 VTVKDVEQDKIVKTVAAHLKKTGKVKVPXHMDLVKTARFKELAPYDPDWFYVRCAAILRH 307
           VTVKDV Q + V+ +AA LKK+GK+KVP  +D VK A+ KELAPYD +WFY R A+  RH
Sbjct: 16  VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 75

Query: 308 IYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARXALQSLEALKLVEKVQDGGRIL 487
           +Y+R   GV ++TKI+GGR+RNGV PSHF R S S+AR  LQ+LE LK+VEK QDGGR L
Sbjct: 76  LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKL 135

Query: 488 TTQXRRDLDRI 520
           T Q +RDLDRI
Sbjct: 136 TPQGQRDLDRI 146


>AB209470-1|BAD92707.1|  249|Homo sapiens proteasome beta 2 subunit
           variant protein.
          Length = 249

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = +2

Query: 260 YDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARXAL 430
           Y P     R   +LR      P G  + T + GGR+  G   S  CR  G   R AL
Sbjct: 179 YTPTISRERAVELLRKCLEEGPGGAGSSTALGGGRRSVGQDRSSSCRRKGRGRRRAL 235


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,573,394
Number of Sequences: 237096
Number of extensions: 1600412
Number of successful extensions: 6361
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6361
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)