Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0431
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11838| Best HMM Match : RVT_1 (HMM E-Value=0) 36 0.035
SB_52564| Best HMM Match : Exo_endo_phos (HMM E-Value=3.2e-09) 36 0.046
SB_12291| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8e-09) 34 0.11
SB_39138| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_6691| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0031) 31 0.76
SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_33404| Best HMM Match : ShTK (HMM E-Value=2.1e-10) 31 1.3
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 30 1.7
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_53367| Best HMM Match : RVT_1 (HMM E-Value=0) 29 3.0
SB_3206| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00047) 29 3.0
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_26059| Best HMM Match : Exo_endo_phos (HMM E-Value=4.5e-09) 29 4.0
SB_18309| Best HMM Match : Exo_endo_phos (HMM E-Value=2.3e-09) 29 4.0
SB_13757| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_7003| Best HMM Match : Exo_endo_phos (HMM E-Value=4.1e-09) 29 4.0
SB_52105| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0012) 29 4.0
SB_51085| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_50959| Best HMM Match : Exo_endo_phos (HMM E-Value=8.7e-05) 28 9.3
SB_49303| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0037) 28 9.3
SB_40024| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0088) 28 9.3
SB_32197| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_31666| Best HMM Match : Exo_endo_phos (HMM E-Value=7.6e-05) 28 9.3
SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_30264| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_24162| Best HMM Match : RVT_1 (HMM E-Value=0) 28 9.3
SB_5691| Best HMM Match : Exo_endo_phos (HMM E-Value=7.5e-05) 28 9.3
>SB_11838| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1009
Score = 35.9 bits (79), Expect = 0.035
Identities = 46/229 (20%), Positives = 94/229 (41%), Gaps = 6/229 (2%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNS--HTTTPNGRRLDALVDDLA--FDIVAPL-TPTHYPLNIAHRP 202
+ I+ GD NC I W+S TP D + LA + + + +PT Y
Sbjct: 229 NAIIWGDFNCSGIEWSSGEAVLTPPVHSWDLALIALAEKYGLSQHVKSPTRY-------D 281
Query: 203 DILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVP-VTRTVVDWHTLGISLA 379
LD+A L +++ V S L SDH V+ ++ AP +P R + +H ++
Sbjct: 282 SFLDLAFSSKPGL-VNACHVTSGL-SDHSAVLFEVDLAPKYIPKPPRKIYLYHKADMAAL 339
Query: 380 EXXXXXXXXXXXXXXXXQDTAEAIDIVTSHITSTLDRSSKQVVAEDFLHRFKLPDDIXEL 559
+ + E + +++ I+ T++R ++ H + I +L
Sbjct: 340 KEHIASFHRDYAASHMERSVEENWNAISTCISDTMERFIPSKTSKTKRHLPWIGAPIKKL 399
Query: 560 LXAKNASIRAYDXYPTAENRIRMRALQRDVKSRITEVRDARWSDFLKGL 706
+ ++ + + ++ + + L+ V + I E + S+ +KG+
Sbjct: 400 MRKRDRAFKKSKRTGKEKDHVNYKRLRNIVSNSIKESHNNYVSEIMKGI 448
>SB_52564| Best HMM Match : Exo_endo_phos (HMM E-Value=3.2e-09)
Length = 748
Score = 35.5 bits (78), Expect = 0.046
Identities = 45/229 (19%), Positives = 94/229 (41%), Gaps = 6/229 (2%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNS--HTTTPNGRRLDALVDDLA--FDIVAPL-TPTHYPLNIAHRP 202
+ I+ GD NC I W+S TP D + LA + + + +PT Y
Sbjct: 259 NAIIGGDFNCSGIEWSSGEAVLTPPVHSWDLALIALAEKYGLSQHVKSPTRY-------D 311
Query: 203 DILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVP-VTRTVVDWHTLGISLA 379
+ LD+A L +++ V S L SDH V+ ++ AP +P R + +H ++
Sbjct: 312 NFLDLAFSSKPGL-VNACHVTSGL-SDHSAVLFEVDLAPKYIPKPPRKIYLYHKADMAAL 369
Query: 380 EXXXXXXXXXXXXXXXXQDTAEAIDIVTSHITSTLDRSSKQVVAEDFLHRFKLPDDIXEL 559
+ + E + +++ I+ ++R ++ H + I +L
Sbjct: 370 KEHIASFHRDYAASHMERSVEENWNAISTCISDAMERFIPSKTSKTKRHLPWIGAPIKKL 429
Query: 560 LXAKNASIRAYDXYPTAENRIRMRALQRDVKSRITEVRDARWSDFLKGL 706
+ ++ + + ++ + + L+ V + I E + S+ +KG+
Sbjct: 430 MRKRDRAFKKSKRTGKEKDHVNYKRLRNIVSNSIKESHNNYVSEIMKGI 478
>SB_12291| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8e-09)
Length = 843
Score = 34.3 bits (75), Expect = 0.11
Identities = 44/229 (19%), Positives = 93/229 (40%), Gaps = 6/229 (2%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNS--HTTTPNGRRLDALVDDLA--FDIVAPL-TPTHYPLNIAHRP 202
+ I+ GD NC I W+S TP D + LA + + + +PT Y
Sbjct: 191 NAIIGGDFNCSGIEWSSGEAVLTPPVHSWDLALIALAEKYGLSQHVKSPTRY-------D 243
Query: 203 DILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVP-VTRTVVDWHTLGISLA 379
LD+A L +++ V S + SDH V+ ++ AP +P R + +H ++
Sbjct: 244 SFLDLAFSSKPGL-VNACHVTSGI-SDHSAVLFEVDLAPKYIPKPPRKIYLYHKADMAAL 301
Query: 380 EXXXXXXXXXXXXXXXXQDTAEAIDIVTSHITSTLDRSSKQVVAEDFLHRFKLPDDIXEL 559
+ + E + +++ I+ ++R ++ H + I +L
Sbjct: 302 KEHIASFHRDYAASHMERSVEENWNAISTCISDAMERFIPSKTSKTKRHLPWIGAPIKKL 361
Query: 560 LXAKNASIRAYDXYPTAENRIRMRALQRDVKSRITEVRDARWSDFLKGL 706
+ ++ + + ++ + + L+ V + I E + S+ +KG+
Sbjct: 362 MRKRDRAFKMSKRTGKEKDHVNYKRLRNIVSNSIKESHNNYVSEIMKGI 410
>SB_39138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 624
Score = 33.9 bits (74), Expect = 0.14
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Frame = +2
Query: 11 IEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNI 190
++++ G VIL GD NC + +S P+ R+L +L L F + PT N+
Sbjct: 427 LDSVSAQGQEVILCGDFNCCLL--SSKRNDPDCRQLKSLFSCLDFKQLI-TEPTRITKNL 483
Query: 191 AHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPV--VMKLG--RAP 319
D++ + N + + V+S SDH V V KL RAP
Sbjct: 484 KSLIDLIAV----NCPMNIRDSRVISSHLSDHELVYCVRKLNWKRAP 526
>SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1855
Score = 31.9 bits (69), Expect = 0.57
Identities = 46/231 (19%), Positives = 81/231 (35%), Gaps = 7/231 (3%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNSHTTT------PNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHR 199
++IL GD NC I W+S P R L AL D + PT +
Sbjct: 1183 NIILGGDFNCSGIDWSSGEAVFVPPVHPWDRELTALADKFGL-VQHAKAPTRF------- 1234
Query: 200 PDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVP-VTRTVVDWHTLGISL 376
LD+ L + + V S L SDH V+ ++ +P P R + +H
Sbjct: 1235 DSFLDLVFSSYPGL-IQACHVTSGL-SDHGAVLFEIDSSPKYTPKPPRKIYQFHKADFVG 1292
Query: 377 AEXXXXXXXXXXXXXXXXQDTAEAIDIVTSHITSTLDRSSKQVVAEDFLHRFKLPDDIXE 556
+ E V++ IT +DR + + H + +
Sbjct: 1293 LRSHLLSFASGYLADCQHRSVEENWSDVSNCITDVMDRFIPHKMTKGKRHLPWINPSVKR 1352
Query: 557 LLXAKNASIRAYDXYPTAENRIRMRALQRDVKSRITEVRDARWSDFLKGLA 709
L+ ++ + + ++ R L+ RI E + ++ + G+A
Sbjct: 1353 LMRKRDRAFKKAKRSGKDKDLNSYRNLRNSASKRIREEHNRYINEVMNGIA 1403
>SB_6691| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0031)
Length = 753
Score = 31.5 bits (68), Expect = 0.76
Identities = 46/231 (19%), Positives = 81/231 (35%), Gaps = 7/231 (3%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNSHTTT------PNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHR 199
++IL GD NC I W+S P R L AL D + PT +
Sbjct: 361 NIILGGDFNCSGIDWSSGEAVFVPPVHPWDRELTALADKFGL-VQHAKAPTRF------- 412
Query: 200 PDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVP-VTRTVVDWHTLGISL 376
LD+ L + + V S L SDH V+ ++ +P P R + +H
Sbjct: 413 DSFLDLVFSSYPGL-IQACHVTSGL-SDHGAVLFEIDSSPKYTPKPPRKIYQFHKADFVG 470
Query: 377 AEXXXXXXXXXXXXXXXXQDTAEAIDIVTSHITSTLDRSSKQVVAEDFLHRFKLPDDIXE 556
+ E V++ IT +DR + + H + +
Sbjct: 471 LRSHLLSFASGYLTDCQHRSVEENWSDVSNCITDIMDRFIPHKMTKGKRHLPWINPSVKR 530
Query: 557 LLXAKNASIRAYDXYPTAENRIRMRALQRDVKSRITEVRDARWSDFLKGLA 709
L+ ++ + + ++ R L+ RI E + ++ + G+A
Sbjct: 531 LMRKRDRAFKKAKRSGKDKDLNSYRNLRNSASKRIREEHNRYINEVMNGIA 581
>SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Frame = +2
Query: 35 SSVILAGDLNCKHIRWNSHTTT--PNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDI 208
S VIL GD NC I W+S + R D + + A D+ +P P + +
Sbjct: 273 SCVILGGDFNCPGIDWSSGEAALISSARSWDHKLIETA-DMFSPSQHVKAP---TRKNNY 328
Query: 209 LDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVP 331
LD+ N L + + V ++L V+ ++ +P P
Sbjct: 329 LDLVFSSNPGL-IQACHVTNDLSDHEGAVLFEVDTSPKYTP 368
>SB_33404| Best HMM Match : ShTK (HMM E-Value=2.1e-10)
Length = 251
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 349 GLAHAGHQPG*I*STIAPV*S-GLYPVSSGYR*SHRHRNVTHHLDIR*VIEASCSGGLPS 525
G H ++PG + + + ++ S+ Y+ +H H N +H D+R V +C L
Sbjct: 94 GYRHKLYKPGDVKKPLGILARRNIFSNSAYYKLNHTHVNCVYHSDVR-VKSDTCEANLIM 152
Query: 526 PLQIARRYXGT 558
L + RY T
Sbjct: 153 SLDVILRYTNT 163
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 7/43 (16%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNSHTTTPNG-------RRLDALVDDLAF 145
+++++GD NC I W S P RRL LV+D AF
Sbjct: 87 NIVISGDFNCGDINWLSDPPLPTAASTASLMRRLLTLVNDFAF 129
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 7/43 (16%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNSHTTTPNG-------RRLDALVDDLAF 145
+++++GD NC I W S P RRL LV+D AF
Sbjct: 339 NIVISGDFNCGDINWLSDPPLPTAASTASLMRRLLTLVNDFAF 381
>SB_53367| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1025
Score = 29.5 bits (63), Expect = 3.0
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNS--HTTTPNGRRLDALVDDLA--FDIVAPL-TPTHYPLNIAHRP 202
+ I+ GD NC I W+S TP D + LA + + + +PT Y
Sbjct: 356 NAIIGGDFNCSGIEWSSGEAVLTPPVHSWDLALIALAEKYGLSQHVKSPTRY-------D 408
Query: 203 DILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVP 331
+ LD+A L +++ V S L SDH V+ ++ AP +P
Sbjct: 409 NFLDLAFSSKPGL-VNACHVTSGL-SDHSAVLFEVDLAPKYIP 449
>SB_3206| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00047)
Length = 256
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/83 (24%), Positives = 38/83 (45%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDI 217
++++AGD NC I WNS + +++ L D ++ T + L+ + +
Sbjct: 134 NIVIAGDFNCGDINWNSDPPSITNHASAPMMNYL-LDFISNNALTQHVLHPTRPASLNTL 192
Query: 218 ALLKNVTLRLHSIEVVSELDSDH 286
L+ + +L L S + SDH
Sbjct: 193 DLVLSSSLALVSDVRILPGMSDH 215
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.1 bits (62), Expect = 4.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNS 88
++++AGD NC I WNS
Sbjct: 77 NIVIAGDFNCGDINWNS 93
>SB_26059| Best HMM Match : Exo_endo_phos (HMM E-Value=4.5e-09)
Length = 334
Score = 29.1 bits (62), Expect = 4.0
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNS--HTTTPNGRRLDALVDDLA--FDIVAPL-TPTHYPLNIAHRP 202
+ I+ GD NC I W+S TP D + LA + + + +PT Y
Sbjct: 172 NAIIGGDFNCSGIEWSSGEAVLTPPVHSWDLALIALAEKYGLSQHVKSPTRY-------D 224
Query: 203 DILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVP 331
LD+A L +++ V S L SDH V+ ++ AP +P
Sbjct: 225 SFLDLAFSSKPGL-VNACHVTSGL-SDHSAVLFEVDLAPKYIP 265
>SB_18309| Best HMM Match : Exo_endo_phos (HMM E-Value=2.3e-09)
Length = 895
Score = 29.1 bits (62), Expect = 4.0
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNS--HTTTPNGRRLDALVDDLA--FDIVAPL-TPTHYPLNIAHRP 202
+ I+ GD NC I W+S TP D + LA + + + +PT Y
Sbjct: 356 NAIIGGDFNCSGIEWSSGEAVLTPPVHSWDLALIALAEKYGLSQHVKSPTRY-------D 408
Query: 203 DILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVP 331
LD+A L +++ V S L SDH V+ ++ AP +P
Sbjct: 409 SFLDLAFSSKPGL-VNACHVTSGL-SDHSAVLFEVDLAPKYIP 449
>SB_13757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/86 (20%), Positives = 38/86 (44%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDI 217
+++++G+ NC I W S +P A++ L D+++ T + + +
Sbjct: 109 NIVISGEFNCGDIDWQSDPPSPTNHVTAAMMQKL-LDLISNNVFTQFVTKPTRPASLKTL 167
Query: 218 ALLKNVTLRLHSIEVVSELDSDHRPV 295
L+ + + L S + + SDH V
Sbjct: 168 DLVLSSSPALVSDITIHQRMSDHNIV 193
>SB_7003| Best HMM Match : Exo_endo_phos (HMM E-Value=4.1e-09)
Length = 378
Score = 29.1 bits (62), Expect = 4.0
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNS--HTTTPNGRRLDALVDDLA--FDIVAPL-TPTHYPLNIAHRP 202
+ I+ GD NC I W+S TP D + LA + + + +PT Y
Sbjct: 185 NAIIGGDFNCSGIEWSSGEAVLTPPVHSWDLALIALAEKYGLSQHVKSPTRY-------D 237
Query: 203 DILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVP 331
LD+A L +++ V S L SDH V+ ++ AP +P
Sbjct: 238 SFLDLAFSSKPGL-VNACHVTSGL-SDHSAVLFEVDLAPKYIP 278
>SB_52105| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0012)
Length = 241
Score = 29.1 bits (62), Expect = 4.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNS 88
++++AGD NC I WNS
Sbjct: 164 NIVIAGDFNCGDINWNS 180
>SB_51085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1251
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNSHTTTPN---GRRLDALVDDL 139
+ I+ GD N + W S T +PN GR ++ + D+
Sbjct: 329 NAIITGDFNVPSVNWKSKTISPNPQYGRAVNQAIIDM 365
>SB_50959| Best HMM Match : Exo_endo_phos (HMM E-Value=8.7e-05)
Length = 275
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNSHTTTP 103
++I+ GD N I WNS TP
Sbjct: 135 NIIIGGDFNLGDIEWNSSVPTP 156
>SB_49303| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0037)
Length = 722
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNSHTTTP 103
++I+ GD N I WNS TP
Sbjct: 488 NIIIGGDFNLGDIEWNSSVPTP 509
>SB_40024| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0088)
Length = 321
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNSHTTTP 103
++I+ GD N I WNS TP
Sbjct: 87 NIIIGGDFNLGDIEWNSSVPTP 108
>SB_32197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNSHTTTP 103
++I+ GD N I WNS TP
Sbjct: 288 NIIIGGDFNLGDIEWNSSVPTP 309
>SB_31666| Best HMM Match : Exo_endo_phos (HMM E-Value=7.6e-05)
Length = 249
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNSHTTTP 103
++I+ GD N I WNS TP
Sbjct: 135 NIIIGGDFNLGDIEWNSSVPTP 156
>SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1360
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNSHTTTP 103
++I+ GD N I WNS TP
Sbjct: 312 NIIIGGDFNLGDIEWNSSVPTP 333
>SB_30264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 689
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/87 (25%), Positives = 38/87 (43%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDI 217
+ I+ GD N + W S T +PN A V+ D+ + + +ILD+
Sbjct: 59 NAIITGDFNVPSVNWKSKTISPNPLYRRA-VNQAIIDMTVQNGLQQVQHKPSRQNNILDL 117
Query: 218 ALLKNVTLRLHSIEVVSELDSDHRPVV 298
+ N + ++S V + SDH +V
Sbjct: 118 VFVNNPNI-INSTLVCPGM-SDHDCIV 142
>SB_24162| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 801
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNSHTTTP 103
++I+ GD N I WNS TP
Sbjct: 29 NIIIGGDFNLGDIEWNSSVPTP 50
>SB_5691| Best HMM Match : Exo_endo_phos (HMM E-Value=7.5e-05)
Length = 273
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 38 SVILAGDLNCKHIRWNSHTTTP 103
++I+ GD N I WNS TP
Sbjct: 135 NIIIGGDFNLGDIEWNSSVPTP 156
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,773,942
Number of Sequences: 59808
Number of extensions: 414053
Number of successful extensions: 1151
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -