Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0431
(750 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 76 5e-14
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 73 6e-13
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 72 7e-13
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 71 2e-12
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 66 4e-11
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 64 2e-10
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 64 2e-10
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 64 2e-10
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 64 2e-10
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 63 4e-10
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 62 8e-10
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 62 8e-10
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 61 2e-09
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 60 2e-09
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 60 2e-09
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 60 2e-09
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 58 1e-08
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 56 7e-08
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 44 2e-04
M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 39 0.008
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 39 0.008
AY069120-1|AAL39265.1| 224|Drosophila melanogaster GH13185p pro... 29 5.1
AE014134-460|AAF51216.1| 224|Drosophila melanogaster CG9960-PA,... 29 5.1
AY071067-1|AAL48689.1| 844|Drosophila melanogaster RE14386p pro... 29 6.8
AE014297-2516|AAF55550.1| 844|Drosophila melanogaster CG7678-PA... 29 6.8
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 76.2 bits (179), Expect = 5e-14
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Frame = +2
Query: 29 MGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLA--FDIVAPLTPTHYPLNIAHRP 202
+G I AGD N KH W S P G++L + D V+P +PT++P ++ P
Sbjct: 128 LGPHFIAAGDYNAKHTHWGSRLVNPKGKQLYKTIIKATNKLDHVSPGSPTYWPSDLNKLP 187
Query: 203 DILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSV-PVTR 340
D++D A+ KN++ L E + +L SDH PV++ L R ++V P TR
Sbjct: 188 DLIDFAVTKNISRSLVKAECLPDLSSDHSPVLIHLRRYAENVKPPTR 234
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 72.5 bits (170), Expect = 6e-13
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Frame = +2
Query: 29 MGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVD-DLAFDIVAPLTPTHYPLNIAHRP 202
+G I AGD N KH W S TP G++L +AL + D V+P PT++P + P
Sbjct: 127 LGDRFIAAGDYNAKHTHWGSRLVTPKGKQLYNALTKPENKLDYVSPGKPTYWPADPRKIP 186
Query: 203 DILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 307
D++D A+ K+V + + E +++L SDH PV + +
Sbjct: 187 DLIDFAITKHVPRNMVTAEALADLSSDHSPVFLNM 221
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 72.1 bits (169), Expect = 7e-13
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Frame = +2
Query: 29 MGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVD-DLAFDIVAPLTPTHYPLNIAHRP 202
+G I AGD N KH W S +P G++L +AL + D V+P PT++P + P
Sbjct: 127 LGDRFIAAGDYNAKHTHWGSRLVSPKGKQLYNALTKPENKLDYVSPGKPTYWPADPRKIP 186
Query: 203 DILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTRTVVDWHT 361
D++D A+ K+V + + E +++L SDH PV + + P V + ++ T
Sbjct: 187 DLIDFAITKHVPRNMVTAEALADLSSDHSPVFLNMLTRPHIVDPPYRLTNFRT 239
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 70.9 bits (166), Expect = 2e-12
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 1/177 (0%)
Frame = +2
Query: 44 ILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIAL 223
I+AGD N H W + + G L LV + D +A PT YP P +D AL
Sbjct: 133 IVAGDWNASHWLWGAGRSNQRGIALANLVLNSEVDSLATGGPTRYPYGCRGSPGYIDFAL 192
Query: 224 LKNVTLRLHS-IEVVSELDSDHRPVVMKLGRAPDSVPVTRTVVDWHTLGISLAEXXXXXX 400
K V L +H+ I V EL SDH P+V+ L S P ++ T + + +
Sbjct: 193 TKGV-LGIHANISAVVELSSDHLPLVITLDAGAISYPKMERLITRRT-NLEVFQSQLEST 250
Query: 401 XXXXXXXXXXQDTAEAIDIVTSHITSTLDRSSKQVVAEDFLHRFKLPDDIXELLXAK 571
QD +AI+++T++I S +++ + + R +P +I L+ K
Sbjct: 251 LPLNTAINSGQDVDDAIELLTNNIKSAARLATRSISRQPAADRIPIPREILLLIAEK 307
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 66.5 bits (155), Expect = 4e-11
Identities = 55/245 (22%), Positives = 103/245 (42%), Gaps = 14/245 (5%)
Frame = +2
Query: 14 EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDDLAFDIVAPLTPTHYPLNI 190
E LG + IL GD N KH +W G L +A+ D +I+A TH+P +
Sbjct: 139 EKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDT 198
Query: 191 AHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTR--TVVDWHTL 364
P +D ++ K + I V++L SDH P+++++ ++ + + + T
Sbjct: 199 RKNPSAIDFSICKGLGRLEKRISSVADLSSDHLPILLEINLDTSTLFLQKQNNNILKKTT 258
Query: 365 GISLAEXXXXXXXXXXXXXXXXQDTAEAIDIVTSHITSTLDRSSKQVVAEDFL------- 523
I L + +D +AI+I +I + D S+ D L
Sbjct: 259 NIELFKTVLERKILLNTEIRVAEDINDAINIFIKNIKDSADESTPSPRIPDNLRRMHGQA 318
Query: 524 ----HRFKLPDDIXELLXAKNASIRAYDXYPTAENRIRMRALQRDVKSRITEVRDARWSD 691
H L ++ LL K R + T E++ +++A + +K + +R+ R +
Sbjct: 319 NRNSHTLTLDENTSRLLEEKRILSRIFKATRTDEDKAKLKAAENRLKKAVKILREKRINK 378
Query: 692 FLKGL 706
++G+
Sbjct: 379 QIEGI 383
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 64.1 bits (149), Expect = 2e-10
Identities = 54/245 (22%), Positives = 102/245 (41%), Gaps = 14/245 (5%)
Frame = +2
Query: 14 EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDDLAFDIVAPLTPTHYPLNI 190
E LG + IL GD N KH +W G L +A+ D +I+A TH+P +
Sbjct: 23 EKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDT 82
Query: 191 AHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTR--TVVDWHTL 364
P +D ++ K + I ++L SDH P+++++ ++ + + + T
Sbjct: 83 RKNPSAIDFSICKGLGRLEKRISSSADLSSDHLPILLEINLDTSTLFLQKQNNNILKKTT 142
Query: 365 GISLAEXXXXXXXXXXXXXXXXQDTAEAIDIVTSHITSTLDRSSKQVVAEDFL------- 523
I L + +D +AI+I +I + D S+ D L
Sbjct: 143 NIELFKTVLERKILLNTEIRVAEDINDAINIFIKNIKDSADESTPSPRIPDNLRRMHGQA 202
Query: 524 ----HRFKLPDDIXELLXAKNASIRAYDXYPTAENRIRMRALQRDVKSRITEVRDARWSD 691
H L ++ LL K R + T E++ +++A + +K + +R+ R +
Sbjct: 203 NRNSHTLTLDENTSRLLEEKRILSRIFKATRTDEDKAKLKAAENRLKKAVKILREKRINK 262
Query: 692 FLKGL 706
++G+
Sbjct: 263 QIEGI 267
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 64.1 bits (149), Expect = 2e-10
Identities = 54/245 (22%), Positives = 102/245 (41%), Gaps = 14/245 (5%)
Frame = +2
Query: 14 EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDDLAFDIVAPLTPTHYPLNI 190
E LG + IL GD N KH +W G L +A+ D +I+A TH+P +
Sbjct: 139 EKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDT 198
Query: 191 AHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTR--TVVDWHTL 364
P +D ++ K + I ++L SDH P+++++ ++ + + + T
Sbjct: 199 RKNPSAIDFSICKGLGRLEKRISSSADLSSDHLPILLEINLDTSTLFLQKQNNNILKKTT 258
Query: 365 GISLAEXXXXXXXXXXXXXXXXQDTAEAIDIVTSHITSTLDRSSKQVVAEDFL------- 523
I L + +D +AI+I +I + D S+ D L
Sbjct: 259 NIELFKTVLERKILLNTEIRVAEDINDAINIFIKNIKDSADESTPSPRIPDNLRRMHGQA 318
Query: 524 ----HRFKLPDDIXELLXAKNASIRAYDXYPTAENRIRMRALQRDVKSRITEVRDARWSD 691
H L ++ LL K R + T E++ +++A + +K + +R+ R +
Sbjct: 319 NRNSHTLTLDENTSRLLEEKRILSRIFKATRTDEDKAKLKAAENRLKKAVKILREKRINK 378
Query: 692 FLKGL 706
++G+
Sbjct: 379 QIEGI 383
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 64.1 bits (149), Expect = 2e-10
Identities = 54/245 (22%), Positives = 102/245 (41%), Gaps = 14/245 (5%)
Frame = +2
Query: 14 EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDDLAFDIVAPLTPTHYPLNI 190
E LG + IL GD N KH +W G L +A+ D +I+A TH+P +
Sbjct: 101 EKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDT 160
Query: 191 AHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTR--TVVDWHTL 364
P +D ++ K + I ++L SDH P+++++ ++ + + + T
Sbjct: 161 RKNPSAIDFSICKGLGRLEKRISSSADLSSDHLPILLEINLDTSNLFLQKQNNNILKKTT 220
Query: 365 GISLAEXXXXXXXXXXXXXXXXQDTAEAIDIVTSHITSTLDRSSKQVVAEDFL------- 523
I L + +D +AI+I +I + D S+ D L
Sbjct: 221 NIELFKTVLERKILLNTEIRVAEDINDAINIFIKNIKDSADESTPSPRIPDNLRRMHGQA 280
Query: 524 ----HRFKLPDDIXELLXAKNASIRAYDXYPTAENRIRMRALQRDVKSRITEVRDARWSD 691
H L ++ LL K R + T E++ +++A + +K + +R+ R +
Sbjct: 281 NRNSHTLTLDENTSRLLEEKRILSRIFKATRTDEDKAKLKAAENRLKKAVKILREKRINK 340
Query: 692 FLKGL 706
++G+
Sbjct: 341 QIEGI 345
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 64.1 bits (149), Expect = 2e-10
Identities = 54/245 (22%), Positives = 102/245 (41%), Gaps = 14/245 (5%)
Frame = +2
Query: 14 EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDDLAFDIVAPLTPTHYPLNI 190
E LG + IL GD N KH +W G L +A+ D +I+A TH+P +
Sbjct: 139 EKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDT 198
Query: 191 AHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTR--TVVDWHTL 364
P +D ++ K + I ++L SDH P+++++ ++ + + + T
Sbjct: 199 RKNPSAIDFSICKGLGRLEKRISSSADLSSDHLPILLEINLDTSNLFLQKQNNNILKKTT 258
Query: 365 GISLAEXXXXXXXXXXXXXXXXQDTAEAIDIVTSHITSTLDRSSKQVVAEDFL------- 523
I L + +D +AI+I +I + D S+ D L
Sbjct: 259 NIELFKTVLERKILLNTEIRVAEDINDAINIFIKNIKDSADESTPSPRIPDNLRRMHGQA 318
Query: 524 ----HRFKLPDDIXELLXAKNASIRAYDXYPTAENRIRMRALQRDVKSRITEVRDARWSD 691
H L ++ LL K R + T E++ +++A + +K + +R+ R +
Sbjct: 319 NRNSHTLTLDENTSRLLEEKRILSRIFKATRTDEDKAKLKAAENRLKKAVKILREKRINK 378
Query: 692 FLKGL 706
++G+
Sbjct: 379 QIEGI 383
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 62.9 bits (146), Expect = 4e-10
Identities = 54/245 (22%), Positives = 103/245 (42%), Gaps = 14/245 (5%)
Frame = +2
Query: 14 EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDDLAFDIVAPLTPTHYPLNI 190
E +G + +IL GD N KH +W G L DA+ D +IVA + TH+P +
Sbjct: 151 EKTMGGQTKLILCGDWNAKHRQWGCIRACQRGAALYDAIQADSMAEIVATGSATHFPHDT 210
Query: 191 AHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTR--TVVDWHTL 364
P +D ++ K + I + L SDH P+++++ ++ + + + T
Sbjct: 211 RKSPSAIDFSICKRLGRYEKRISSSAHLSSDHLPILLEINLDIKTISLQKQNNNILKKTT 270
Query: 365 GISLAEXXXXXXXXXXXXXXXXQDTAEAIDIVTSHITSTLDRSS-----------KQVVA 511
I L + +D +AI+I +I + S+ + A
Sbjct: 271 NIELFKNVLERKILLNTEIRVAEDINDAINIFIKNIKDSAAESTPSPRIPDNHRRRYGQA 330
Query: 512 EDFLHRFKLPDDIXELLXAKNASIRAYDXYPTAENRIRMRALQRDVKSRITEVRDARWSD 691
H L ++ LL K R + T E++ +++A + +K I +R+ R ++
Sbjct: 331 NRNSHTLTLDENTSRLLEEKRIQSRIFKATRTNEDKTKLKAAENRLKKVIKILREKRINE 390
Query: 692 FLKGL 706
++G+
Sbjct: 391 QIEGI 395
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 62.1 bits (144), Expect = 8e-10
Identities = 59/254 (23%), Positives = 103/254 (40%), Gaps = 6/254 (2%)
Frame = +2
Query: 5 SDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPL 184
SD+ + + + ++ GD N +H W G+ L+ L D F I+ P PT+ P
Sbjct: 144 SDLLKISQINGNFLICGDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQPTYIPH 203
Query: 185 NIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTRTVVDWHTL 364
N + LD+ L N+ +L + V+ EL SDH PVV+K S R V + L
Sbjct: 204 NHKAKASTLDLC-LTNIPNQLANPAVMQELSSDHLPVVIKY-----STNFMRNVKTYPIL 257
Query: 365 GIS----LAEXXXXXXXXXXXXXXXXQDTAEAIDIVTSHITSTLDRSSKQVVAEDFLHRF 532
G + Q + ID + T ++ + + V +H
Sbjct: 258 GRANWALFKRIINERLMVEEVVVNCSQISTLDIDNLIGSFTRVINYAFLKAVPHKPIHHS 317
Query: 533 K--LPDDIXELLXAKNASIRAYDXYPTAENRIRMRALQRDVKSRITEVRDARWSDFLKGL 706
K LP I EL +N R + + R L ++ + +A+W++ L+ L
Sbjct: 318 KLTLPVHITELFKTRNIIQRQWFRSRHPLLKSRCDHLNYIIRKELFIYNNAKWNNKLQKL 377
Query: 707 APSQRSYYRLTRTL 748
+ ++ +T+ +
Sbjct: 378 DKCSKPFWNITKAI 391
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 62.1 bits (144), Expect = 8e-10
Identities = 59/254 (23%), Positives = 103/254 (40%), Gaps = 6/254 (2%)
Frame = +2
Query: 5 SDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPL 184
SD+ + + + ++ GD N +H W G+ L+ L D F I+ P PT+ P
Sbjct: 92 SDLLKISQINGNFLICGDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQPTYIPH 151
Query: 185 NIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTRTVVDWHTL 364
N + LD+ L N+ +L + V+ EL SDH PVV+K S R V + L
Sbjct: 152 NHKAKASTLDLC-LTNIPNQLANPAVMQELSSDHLPVVIKY-----STNFMRNVKTYPIL 205
Query: 365 GIS----LAEXXXXXXXXXXXXXXXXQDTAEAIDIVTSHITSTLDRSSKQVVAEDFLHRF 532
G + Q + ID + T ++ + + V +H
Sbjct: 206 GRANWALFKRIINERLMVEEVVVNCSQISTLDIDNLIGSFTRVINYAFLKAVPHKPIHHS 265
Query: 533 K--LPDDIXELLXAKNASIRAYDXYPTAENRIRMRALQRDVKSRITEVRDARWSDFLKGL 706
K LP I EL +N R + + R L ++ + +A+W++ L+ L
Sbjct: 266 KLTLPVHITELFKTRNIIQRQWFRSRHPLLKSRCDHLNYIIRKELFIYNNAKWNNKLQKL 325
Query: 707 APSQRSYYRLTRTL 748
+ ++ +T+ +
Sbjct: 326 DKCSKPFWNITKAI 339
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 60.9 bits (141), Expect = 2e-09
Identities = 32/110 (29%), Positives = 51/110 (46%)
Frame = +2
Query: 32 GSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDIL 211
G ++ GD N +H W +P GR L + I+A +PT YP +H P +
Sbjct: 130 GQRYLVGGDWNARHWLWGDTCNSPRGRELAEALSVTGAKILATGSPTRYPYVPSHTPSCI 189
Query: 212 DIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTRTVVDWHT 361
D A+ + L +I +LDSDH P+++ + V + +V HT
Sbjct: 190 DFAVYHGIPDHLATITQSWDLDSDHLPLIISIETDSTHVNPSPRLVTKHT 239
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 60.5 bits (140), Expect = 2e-09
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +2
Query: 14 EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLD-ALVDDLAFDIVAPLTPTHYPLNI 190
E LL S IL GD NCKH W ++ + GR L +++ DIVA TH+P +
Sbjct: 143 EMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDK 202
Query: 191 AHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 307
+P LD A+ K + EL SDH P+ + L
Sbjct: 203 KKQPSALDFAICKGFHTQKLKTYSTDELSSDHLPIQIVL 241
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 60.5 bits (140), Expect = 2e-09
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +2
Query: 14 EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLD-ALVDDLAFDIVAPLTPTHYPLNI 190
E LL S IL GD NCKH W ++ + GR L +++ DIVA TH+P +
Sbjct: 143 EMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDK 202
Query: 191 AHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 307
+P LD A+ K + EL SDH P+ + L
Sbjct: 203 KKQPSALDFAICKGFHTQKLKTYSTDELSSDHLPIQIVL 241
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 60.5 bits (140), Expect = 2e-09
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +2
Query: 14 EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLD-ALVDDLAFDIVAPLTPTHYPLNI 190
E LL S IL GD NCKH W ++ + GR L +++ DIVA TH+P +
Sbjct: 143 EMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDK 202
Query: 191 AHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 307
+P LD A+ K + EL SDH P+ + L
Sbjct: 203 KKQPSALDFAICKGFHTQKLKTYSTDELSSDHLPIQIVL 241
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 58.0 bits (134), Expect = 1e-08
Identities = 52/241 (21%), Positives = 90/241 (37%), Gaps = 3/241 (1%)
Frame = +2
Query: 29 MGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDI 208
+G+ I GD N KH W + + P G+ L ++ + ++A PT Y N P
Sbjct: 129 LGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSYNPLLTPSA 188
Query: 209 LDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTRTVVDWHTLGISLAEXX 388
LD + + ++ + EL SDH P++ L P P R + H I++ +
Sbjct: 189 LDFFITCGYGMGRLDVQTLQELSSDHLPILAVLHATPLKKP-QRVRLLAHNADINIFKTH 247
Query: 389 XXXXXXXXXXXXXXQDTAEAIDIVTSHITSTLDRSSKQVVAE-DFLHRFKLPDDIXELLX 565
D A + S ++ ++ + E + +LP I LL
Sbjct: 248 LEQLSEVNMQILEAVDIDNATSLFMSKLSEAAQLAAPRNRHEVEAFRPLQLPSSILALLR 307
Query: 566 AKNASIRAYDXYPTAENRIRM--RALQRDVKSRITEVRDARWSDFLKGLAPSQRSYYRLT 739
K + Y T + R++ L + + + A+ FL L + Y L
Sbjct: 308 LKRRVRKEYAR--TGDPRMQQIHSRLANCLHKALARRKQAQIDTFLDNLGADASTNYSLW 365
Query: 740 R 742
R
Sbjct: 366 R 366
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 55.6 bits (128), Expect = 7e-08
Identities = 52/249 (20%), Positives = 103/249 (41%), Gaps = 15/249 (6%)
Frame = +2
Query: 14 EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDDLAFDIVAPLTPTHYPLNI 190
E LG + IL GD N KH +W G L +A+ D +I+A TH+P +
Sbjct: 139 EKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADSTAEIIATGCATHFPHDT 198
Query: 191 AHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTR---TVVDWHT 361
P +D ++ K + I ++L SDH P+++++ +++ + + ++ +T
Sbjct: 199 RKNPSAIDFSICKGLGRFEKRISSGADLSSDHLPILLEINLDTNTLFLQKQNNNILKKNT 258
Query: 362 LGISLAEXXXXXXXXXXXXXXXXQDTAEAIDIVTSHITSTLDRSS-----------KQVV 508
I L + +D +AI +I + S+ +
Sbjct: 259 -NIELFKKVLERKILLNTEIRVAEDINDAISTFMKNIKDSAAESTPSPRIRDNPRRRHRQ 317
Query: 509 AEDFLHRFKLPDDIXELLXAKNASIRAYDXYPTAENRIRMRALQRDVKSRITEVRDARWS 688
A H L ++ LL K R + E++ +++A + +K I +R+ R +
Sbjct: 318 ANRNSHTLALDENTSRLLEEKRILSRVFKATKNYEDKAKLKAAENRLKKAIKILRENRIN 377
Query: 689 DFLKGLAPS 715
+ ++G+ S
Sbjct: 378 EQVEGIDTS 386
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 44.0 bits (99), Expect = 2e-04
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Frame = +2
Query: 2 SSDI-EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHY 178
SSDI E L + S IL GDLN W S T G++++ ++ + + ++ +PTH
Sbjct: 116 SSDISEILQNLNGSTILLGDLNSWSPLWGSPRTNTRGKKIETVILENSLIVLNDGSPTH- 174
Query: 179 PLNIAHRPDILDIALLKNVTLRLHSIEVVSEL-DSDHRPVVMKLG---RAPDSVPVTRTV 346
L+ + +DI+L+ + S + L SDH P+ + + R +++P+ +
Sbjct: 175 -LSTHNTFTHIDISLISPQIAHMCSWSISDNLHGSDHFPITIHINTPTRPDNTLPLPKYK 233
Query: 347 VD 352
D
Sbjct: 234 TD 235
>M38643-2|AAA28940.1| 192|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 192
Score = 38.7 bits (86), Expect = 0.008
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 29 MGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLN 187
+G+ I GD N KH W + + P G+ L ++ + ++A PT Y N
Sbjct: 129 LGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSYN 181
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 38.7 bits (86), Expect = 0.008
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +2
Query: 44 ILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIAL 223
++ GD N H W S TT G+ +D++ ++ +PTH+ + + +D+ L
Sbjct: 127 LITGDFNGWHHPWGSPTTNKRGKITHRFIDNMHLILLNDKSPTHFSTHNTYTH--IDLTL 184
Query: 224 LKNVTLRLHSIEVVSEL-DSDHRPVVMKL 307
+ +++++L SDH P++ L
Sbjct: 185 CSPILAPHAKWKILNDLHGSDHFPIITTL 213
>AY069120-1|AAL39265.1| 224|Drosophila melanogaster GH13185p
protein.
Length = 224
Score = 29.5 bits (63), Expect = 5.1
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 32 GSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAP 160
G S+ LA D+N K T T NG RLD++ LA D + P
Sbjct: 66 GFSLCLATDINPKACNATRRTATRNGARLDSIRCSLA-DALRP 107
>AE014134-460|AAF51216.1| 224|Drosophila melanogaster CG9960-PA,
isoform A protein.
Length = 224
Score = 29.5 bits (63), Expect = 5.1
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 32 GSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAP 160
G S+ LA D+N K T T NG RLD++ LA D + P
Sbjct: 66 GFSLCLATDINPKACNATRRTATRNGARLDSIRCSLA-DALRP 107
>AY071067-1|AAL48689.1| 844|Drosophila melanogaster RE14386p
protein.
Length = 844
Score = 29.1 bits (62), Expect = 6.8
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +2
Query: 221 LLKNVTLRLHSIEVVSELDSDHRPVVMK--LGRAPD-SVPVTRTVVDWHTLGI 370
++KNV RL ++V+ SDHR V++ L + P S V + +HTL +
Sbjct: 267 MVKNVRTRLEDLQVIINQTSDHRTCVLQAALKQLPTWSAMVKKMKGIYHTLNL 319
>AE014297-2516|AAF55550.1| 844|Drosophila melanogaster CG7678-PA
protein.
Length = 844
Score = 29.1 bits (62), Expect = 6.8
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +2
Query: 221 LLKNVTLRLHSIEVVSELDSDHRPVVMK--LGRAPD-SVPVTRTVVDWHTLGI 370
++KNV RL ++V+ SDHR V++ L + P S V + +HTL +
Sbjct: 267 MVKNVRTRLEDLQVIINQTSDHRTCVLQAALKQLPTWSAMVKKMKGIYHTLNL 319
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,481,900
Number of Sequences: 53049
Number of extensions: 617957
Number of successful extensions: 1590
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1575
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -