Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0430
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domai...    64   8e-11
U37548-2|ABK57090.1|  452|Caenorhabditis elegans Sulfatase domai...    35   0.071
U37548-1|AAA79198.2|  488|Caenorhabditis elegans Sulfatase domai...    35   0.071
U00049-4|AAC47055.1|  332|Caenorhabditis elegans Serpentine rece...    28   8.1  

>U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domain
           protein protein 1 protein.
          Length = 709

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 28/62 (45%), Positives = 38/62 (61%)
 Frame = +2

Query: 131 ITSKQTFATILQEAGYDTFYAGKYLNQYGTKEXGGPEVVPPGWTEWRGLVGNSVYYNYTL 310
           +  K++    LQEAGY T Y GKYLN+Y          +PPGW EW  +V NS +YNYT+
Sbjct: 112 VHEKKSIGVYLQEAGYRTAYLGKYLNEYDGS------YIPPGWDEWHAIVKNSKFYNYTM 165

Query: 311 SN 316
           ++
Sbjct: 166 NS 167



 Score = 60.9 bits (141), Expect = 9e-10
 Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
 Frame = +1

Query: 1   TNSYVTSPICCPSRASLLTGMYVHNHKTVNNSLHGGCYGENW-KYHE*TDVRYY 159
           T+ YVT+PICCPSR+++LTG+YVHNH    N+ +  C G  W K HE   +  Y
Sbjct: 70  TSGYVTTPICCPSRSTILTGLYVHNHHVHTNNQN--CTGVEWRKVHEKKSIGVY 121



 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 27/69 (39%), Positives = 38/69 (55%)
 Frame = +1

Query: 535 DXHWLLRMPXSPLPDAMLPXLDQVYRTRWETLLSVDEMVADIIXALETQALLDNTYVXFT 714
           D  WLL+     + D  +   D ++R R +TL SVDE +  +   L     L NTY  +T
Sbjct: 248 DKQWLLQRTGK-MNDVHISFTDLLHRRRLQTLQSVDEGIERLFNLLRELNQLWNTYAIYT 306

Query: 715 SDNGYHIGQ 741
           SD+GYH+GQ
Sbjct: 307 SDHGYHLGQ 315


>U37548-2|ABK57090.1|  452|Caenorhabditis elegans Sulfatase domain
           protein protein3, isoform b protein.
          Length = 452

 Score = 34.7 bits (76), Expect = 0.071
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +3

Query: 324 VPTFSTNS-YLTDVIRELGVSYIENXTESKPFLMXL 428
           VP FS N  Y TD+  ++ +S ++N   SKPF M L
Sbjct: 158 VPDFSQNGVYSTDLFTDVAMSVLDNHNNSKPFFMFL 193



 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +1

Query: 628 LLSVDEMVADIIXALETQALLDNTYVXFTSDNG 726
           L ++D  +  ++  L+   L +NT + FTSDNG
Sbjct: 231 LTAMDFAIGRLVEYLKASNLYENTVIVFTSDNG 263


>U37548-1|AAA79198.2|  488|Caenorhabditis elegans Sulfatase domain
           protein protein3, isoform a protein.
          Length = 488

 Score = 34.7 bits (76), Expect = 0.071
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +3

Query: 324 VPTFSTNS-YLTDVIRELGVSYIENXTESKPFLMXL 428
           VP FS N  Y TD+  ++ +S ++N   SKPF M L
Sbjct: 194 VPDFSQNGVYSTDLFTDVAMSVLDNHNNSKPFFMFL 229



 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +1

Query: 628 LLSVDEMVADIIXALETQALLDNTYVXFTSDNG 726
           L ++D  +  ++  L+   L +NT + FTSDNG
Sbjct: 267 LTAMDFAIGRLVEYLKASNLYENTVIVFTSDNG 299


>U00049-4|AAC47055.1|  332|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 3 protein.
          Length = 332

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = -1

Query: 207 FKYFPA*NVSYPAS*SIVAN--VCLLVIFPVLSIASAVKTIVHGLVVVNVHAC 55
           F YFP   VS+     IV N  V + + + +LS   A+K ++H  + VN  +C
Sbjct: 78  FLYFPQLCVSFS---EIVKNSPVFMRIYYCLLSYLIAIKPVIHIFIAVNRMSC 127


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,802,894
Number of Sequences: 27780
Number of extensions: 309914
Number of successful extensions: 813
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)