Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0429
         (599 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.5  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   2.0  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   2.6  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   2.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.6  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   4.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   4.6  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 297 NRHKAMRKHKCENEIKIKN 241
           N ++ +RK+ C+NE + KN
Sbjct: 326 NHNEQLRKYLCKNEDETKN 344


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 297 NRHKAMRKHKCENEIKIKN 241
           N ++ +RK+ C+NE + KN
Sbjct: 218 NHNEQLRKYLCKNEDETKN 236


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +2

Query: 446 WYRSSRTSLLTYWIFLLQMLESARR 520
           W+  S    +  W FLLQ LE   R
Sbjct: 54  WFAGSSNVGINKWRFLLQCLEDLDR 78


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 236 WSFLIFISFSHLCFLIALCRLYSI*IL*LCLEQVR 340
           WSFL+F  +S L  L  +  + ++ IL L   +VR
Sbjct: 280 WSFLLFTLYSSLLLLDYVSCVVALIILILQCGRVR 314


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 236 WSFLIFISFSHLCFLIALCRLYSI*IL*LCLEQVR 340
           WSFL+F  +S L  L  +  + ++ IL L   +VR
Sbjct: 206 WSFLLFTLYSSLLLLDYVSCVVALIILILQCGRVR 240


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 248 IFISFSHLCFL 280
           +FISFS +C+L
Sbjct: 219 VFISFSKICYL 229


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 248 IFISFSHLCFL 280
           +FISFS +C+L
Sbjct: 237 VFISFSKICYL 247


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 454 PVPSHLHSRSTI 419
           P+PS +HS STI
Sbjct: 401 PLPSSVHSHSTI 412


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,889
Number of Sequences: 336
Number of extensions: 3175
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)