Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0429
         (599 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040695-1|AAH40695.1|  358|Homo sapiens WBSCR16 protein protein.      29   9.4  
BC032712-1|AAH32712.1|  454|Homo sapiens WBSCR16 protein protein.      29   9.4  
BC019008-1|AAH19008.1|  464|Homo sapiens Williams-Beuren syndrom...    29   9.4  
BC007823-1|AAH07823.1|  464|Homo sapiens Williams-Beuren syndrom...    29   9.4  
AF410455-1|AAM62304.1|  464|Homo sapiens RCC1-like G exchanging ...    29   9.4  

>BC040695-1|AAH40695.1|  358|Homo sapiens WBSCR16 protein protein.
          Length = 358

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +1

Query: 10  LVPNSARGPRSHSNPRLRCGTTAPKKFFEIQKHSISIHKYGYTIVIRSTLSAXAV 174
           +VP+S  GPR+ + PR R     P +    QK S +   YG+T++   T     V
Sbjct: 78  VVPSSGPGPRAGARPRRRI-QPVPYRLELDQKISSAACGYGFTLLSSKTADVTKV 131


>BC032712-1|AAH32712.1|  454|Homo sapiens WBSCR16 protein protein.
          Length = 454

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +1

Query: 10  LVPNSARGPRSHSNPRLRCGTTAPKKFFEIQKHSISIHKYGYTIVIRSTLSAXAV 174
           +VP+S  GPR+ + PR R     P +    QK S +   YG+T++   T     V
Sbjct: 78  VVPSSGPGPRAGARPRRRI-QPVPYRLELDQKISSAACGYGFTLLSSKTADVTKV 131


>BC019008-1|AAH19008.1|  464|Homo sapiens Williams-Beuren syndrome
           chromosome region 16 protein.
          Length = 464

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +1

Query: 10  LVPNSARGPRSHSNPRLRCGTTAPKKFFEIQKHSISIHKYGYTIVIRSTLSAXAV 174
           +VP+S  GPR+ + PR R     P +    QK S +   YG+T++   T     V
Sbjct: 78  VVPSSGPGPRAGARPRRRI-QPVPYRLELDQKISSAACGYGFTLLSSKTADVTKV 131


>BC007823-1|AAH07823.1|  464|Homo sapiens Williams-Beuren syndrome
           chromosome region 16 protein.
          Length = 464

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +1

Query: 10  LVPNSARGPRSHSNPRLRCGTTAPKKFFEIQKHSISIHKYGYTIVIRSTLSAXAV 174
           +VP+S  GPR+ + PR R     P +    QK S +   YG+T++   T     V
Sbjct: 78  VVPSSGPGPRAGARPRRRI-QPVPYRLELDQKISSAACGYGFTLLSSKTADVTKV 131


>AF410455-1|AAM62304.1|  464|Homo sapiens RCC1-like G exchanging
           factor-like protein protein.
          Length = 464

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +1

Query: 10  LVPNSARGPRSHSNPRLRCGTTAPKKFFEIQKHSISIHKYGYTIVIRSTLSAXAV 174
           +VP+S  GPR+ + PR R     P +    QK S +   YG+T++   T     V
Sbjct: 78  VVPSSGPGPRAGARPRRRI-QPVPYRLELDQKISSAACGYGFTLLSSKTADVTKV 131


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,773,966
Number of Sequences: 237096
Number of extensions: 1931203
Number of successful extensions: 3345
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3345
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)