Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0428
         (400 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   1.0  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   1.8  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   4.1  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         22   9.5  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         22   9.5  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    22   9.5  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 25.0 bits (52), Expect = 1.0
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -1

Query: 142  HQLRQHHHPPG*EQSKH 92
            HQL QHHH P   QS H
Sbjct: 1328 HQL-QHHHQPQLSQSSH 1343


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -1

Query: 196 ANMALHLQPPLSRWWKFSHQLRQHHHP 116
           A+  LH QP  +      H    HHHP
Sbjct: 142 AHHPLHYQPAAAAAMHHHHHHPHHHHP 168


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -3

Query: 173 AAAFKMVEIFSPVTATSSSTRMRAE*THANSAFDTIFSFE 54
           +A  + V IF+P +  SSS+   AE + + S+ DT FS E
Sbjct: 655 SAEMRTVLIFAPSSNQSSSSTPNAEQSPSASSKDT-FSNE 693


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 9/24 (37%), Positives = 11/24 (45%), Gaps = 2/24 (8%)
 Frame = -2

Query: 210 GEQTWPIWLYI--YSRRFQDGGNF 145
           G   WP W+Y   YS R   G  +
Sbjct: 461 GSNLWPAWVYCTRYSDRPSSGPRY 484


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 9/24 (37%), Positives = 11/24 (45%), Gaps = 2/24 (8%)
 Frame = -2

Query: 210 GEQTWPIWLYI--YSRRFQDGGNF 145
           G   WP W+Y   YS R   G  +
Sbjct: 461 GSNLWPAWVYCTRYSDRPSSGPRY 484


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 145 SHQLRQHHHP 116
           SHQ +QHH P
Sbjct: 830 SHQQQQHHQP 839


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 322,016
Number of Sequences: 2352
Number of extensions: 6080
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)