Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0427
         (750 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    36   1.1  
UniRef50_A5NUQ5 Cluster: Diguanylate cyclase/phosphodiesterase w...    34   3.3  
UniRef50_Q4Y1U1 Cluster: Putative uncharacterized protein; n=3; ...    33   7.5  
UniRef50_A7AN42 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  
UniRef50_Q9CGY1 Cluster: UPF0042 protein yjiE; n=6; Lactobacilla...    33   9.9  

>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 14/17 (82%), Positives = 14/17 (82%)
 Frame = -3

Query: 115 MGDGNHSPSGGPYLRLP 65
           MGDGNHSPSG PY  LP
Sbjct: 1   MGDGNHSPSGRPYASLP 17


>UniRef50_A5NUQ5 Cluster: Diguanylate cyclase/phosphodiesterase with
           PAS/PAC sensor(S) precursor; n=1; Methylobacterium sp.
           4-46|Rep: Diguanylate cyclase/phosphodiesterase with
           PAS/PAC sensor(S) precursor - Methylobacterium sp. 4-46
          Length = 1055

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -3

Query: 115 MGDGNHSPSGGPYLRLPLPDLRGRVIYVGFVGR*WYEP 2
           +G G   P GGP LR    D   R+  +G +GR W EP
Sbjct: 68  IGHGRREPDGGPTLRAMGEDAGRRLGRIGSLGREWLEP 105


>UniRef50_Q4Y1U1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 386

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +3

Query: 630 YFII*FEFYYNKHLN*NLNFQTSNYYFIFVYL 725
           YF+  F+  YN ++   +NF+ SN++F+F +L
Sbjct: 163 YFLGDFKINYNNYIQKYMNFKLSNFFFLFSFL 194


>UniRef50_A7AN42 Cluster: Putative uncharacterized protein; n=1;
           Babesia bovis|Rep: Putative uncharacterized protein -
           Babesia bovis
          Length = 794

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 15/47 (31%), Positives = 29/47 (61%)
 Frame = +3

Query: 141 VKPLLSTLKYSTEVISGVKKILSPSIISNVL*YSDGAGDIHIIVSMG 281
           +K ++  + +S E++  VK IL    I+N+L Y+D + D+H++   G
Sbjct: 56  IKIMVENVPHSVELLESVKTILRS--INNILGYTDNSFDLHLLDKFG 100


>UniRef50_Q9CGY1 Cluster: UPF0042 protein yjiE; n=6;
           Lactobacillales|Rep: UPF0042 protein yjiE - Lactococcus
           lactis subsp. lactis (Streptococcus lactis)
          Length = 295

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +3

Query: 336 TLNQSVYFKLLLL*ANYFKVLSDYNLTKRSHLLVL 440
           T N SV FKLL L AN  +++S Y  T+RSH L +
Sbjct: 81  TDNGSVNFKLLFLDANDTELVSRYKETRRSHPLAI 115


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,653,034
Number of Sequences: 1657284
Number of extensions: 15051229
Number of successful extensions: 32651
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32640
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)