Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0427
(750 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 22 4.6
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 22 6.0
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 6.0
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 21 8.0
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 21 8.0
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 21 8.0
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 21 8.0
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 22.2 bits (45), Expect = 4.6
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 446 TLCGISDECSFVMLHMDL 499
++CG S F+M+ +DL
Sbjct: 422 SICGASSSYLFIMIQLDL 439
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 196 KKSYHHQSFQMYYSIVMGLEIFT 264
KK +H+ M Y+IV GL + T
Sbjct: 184 KKQFHYIFTYMPYNIVFGLCLTT 206
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3
Query: 112 GDGNHSPSGGP 80
G GN+ P GGP
Sbjct: 530 GSGNNQPPGGP 540
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 21.4 bits (43), Expect = 8.0
Identities = 6/22 (27%), Positives = 13/22 (59%)
Frame = +3
Query: 594 VFCMCFFYLLDPYFII*FEFYY 659
+F +C +Y + P F + +Y+
Sbjct: 128 LFLLCIYYFVVPLFFLLCIYYF 149
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 21.4 bits (43), Expect = 8.0
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 390 KVLSDYNLTKRSHL-LVLFL 446
+ LSDYN+ K S L LVL L
Sbjct: 54 RTLSDYNIQKESTLHLVLRL 73
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 21.4 bits (43), Expect = 8.0
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 390 KVLSDYNLTKRSHL-LVLFL 446
+ LSDYN+ K S L LVL L
Sbjct: 54 RTLSDYNIQKESTLHLVLRL 73
Score = 21.4 bits (43), Expect = 8.0
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 390 KVLSDYNLTKRSHL-LVLFL 446
+ LSDYN+ K S L LVL L
Sbjct: 130 RTLSDYNIQKESTLHLVLRL 149
Score = 21.4 bits (43), Expect = 8.0
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 390 KVLSDYNLTKRSHL-LVLFL 446
+ LSDYN+ K S L LVL L
Sbjct: 206 RTLSDYNIQKESTLHLVLRL 225
Score = 21.4 bits (43), Expect = 8.0
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 390 KVLSDYNLTKRSHL-LVLFL 446
+ LSDYN+ K S L LVL L
Sbjct: 282 RTLSDYNIQKESTLHLVLRL 301
Score = 21.4 bits (43), Expect = 8.0
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 390 KVLSDYNLTKRSHL-LVLFL 446
+ LSDYN+ K S L LVL L
Sbjct: 358 RTLSDYNIQKESTLHLVLRL 377
Score = 21.4 bits (43), Expect = 8.0
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 390 KVLSDYNLTKRSHL-LVLFL 446
+ LSDYN+ K S L LVL L
Sbjct: 434 RTLSDYNIQKESTLHLVLRL 453
Score = 21.4 bits (43), Expect = 8.0
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 390 KVLSDYNLTKRSHL-LVLFL 446
+ LSDYN+ K S L LVL L
Sbjct: 510 RTLSDYNIQKESTLHLVLRL 529
Score = 21.4 bits (43), Expect = 8.0
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 390 KVLSDYNLTKRSHL-LVLFL 446
+ LSDYN+ K S L LVL L
Sbjct: 586 RTLSDYNIQKESTLHLVLRL 605
Score = 21.4 bits (43), Expect = 8.0
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 390 KVLSDYNLTKRSHL-LVLFL 446
+ LSDYN+ K S L LVL L
Sbjct: 662 RTLSDYNIQKESTLHLVLRL 681
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 21.4 bits (43), Expect = 8.0
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 390 KVLSDYNLTKRSHL-LVLFL 446
+ LSDYN+ K S L LVL L
Sbjct: 26 RTLSDYNIQKESTLHLVLRL 45
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,141
Number of Sequences: 336
Number of extensions: 4213
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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