Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0427
         (750 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g57500.1 68418.m07185 expressed protein                             29   4.4  
At5g09350.1 68418.m01083 phosphatidylinositol 4-kinase, putative...    28   5.8  

>At5g57500.1 68418.m07185 expressed protein
          Length = 318

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -1

Query: 528 NQAAGRKTHVKSI-CNITKEHSSLIPHNVGKGQEDDYVLLNCNQ 400
           N   G K  VK + CN+TKE   ++   +   + DD ++LNCN+
Sbjct: 96  NVPDGVKVDVKFVFCNLTKEDQKVLVA-LEIMRYDDIIILNCNE 138


>At5g09350.1 68418.m01083 phosphatidylinositol 4-kinase, putative
           strong similarity to gi:4467359
          Length = 1116

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -1

Query: 432 EDDYVLLNCNQTAP*NNSLKVIKA*NTQTGSKCWQKNMESSR 307
           ED+YVLLN  +  P    ++V+KA  T  G+K    +++ S+
Sbjct: 616 EDEYVLLNSREKVPYMICVEVLKA-ETPCGAKTTSTSLKLSK 656


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,903,635
Number of Sequences: 28952
Number of extensions: 336276
Number of successful extensions: 718
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)