Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0425
(750 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 251 1e-65
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 248 1e-64
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 244 2e-63
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 190 3e-47
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 185 1e-45
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 179 6e-44
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 164 2e-39
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 159 5e-38
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 157 3e-37
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 141 1e-32
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 134 2e-30
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 124 2e-27
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 113 4e-24
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 105 2e-21
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 101 1e-20
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 60 4e-08
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 60 4e-08
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 60 6e-08
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 58 2e-07
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 57 5e-07
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 56 9e-07
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 53 9e-06
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 52 2e-05
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 51 3e-05
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 50 5e-05
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 50 5e-05
UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5; Sulfolo... 50 5e-05
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 50 8e-05
UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus ... 48 2e-04
UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyr... 48 2e-04
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 44 0.004
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 43 0.007
UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8; Euryarc... 43 0.009
UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 42 0.016
UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus ... 40 0.086
UniRef50_Q8ZX25 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 39 0.15
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 36 1.1
UniRef50_Q8TRJ6 Cluster: Glycosyltransferase; n=1; Methanosarcin... 35 2.5
UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_A1TZN4 Cluster: Flagellar hook-associated protein FlgK;... 33 7.5
UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4; Actin... 33 9.9
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 251 bits (615), Expect = 1e-65
Identities = 120/174 (68%), Positives = 135/174 (77%)
Frame = +2
Query: 38 QKLFEVVDEHKLRFFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 217
QK FEV+D+HKLR FY+KRMGAE+ AD LGDEWKGYV ++AGGNDKQGFPMKQGVLTN+R
Sbjct: 13 QKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQGFPMKQGVLTNTR 72
Query: 218 VRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVXVRKGAQEIPGLTDGNVPRR 397
VRLL+ KGHSCYRPRR GERKRKSVRGCIVD NLS LAL+ V+KG ++IPGLTD V RR
Sbjct: 73 VRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKDIPGLTDTTVLRR 132
Query: 398 LGPKRASKIRKLFNLSXXXXXXXXXXXXXLPAKEGKXNAXPXXKAPXIXXLXTP 559
LGPKRAS IRKL+NL+ LP K+GK P KAP I L TP
Sbjct: 133 LGPKRASNIRKLYNLTKEDDVRQYVVKRPLPEKDGK---KPRTKAPKIQRLITP 183
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 248 bits (607), Expect = 1e-64
Identities = 125/175 (71%), Positives = 135/175 (77%)
Frame = +2
Query: 35 CQKLFEVVDEHKLRFFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 214
CQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQGFPMKQGVLT+
Sbjct: 12 CQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHG 71
Query: 215 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVXVRKGAQEIPGLTDGNVPR 394
RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LV V+KG ++IPGLTD VPR
Sbjct: 72 RVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPR 131
Query: 395 RLGPKRASKIRKLFNLSXXXXXXXXXXXXXLPAKEGKXNAXPXXKAPXIXXLXTP 559
RLGPKRAS+IRKLFNLS L KEGK P KAP I L TP
Sbjct: 132 RLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQRLVTP 182
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 244 bits (597), Expect = 2e-63
Identities = 116/175 (66%), Positives = 130/175 (74%)
Frame = +2
Query: 35 CQKLFEVVDEHKLRFFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 214
CQKL E+ DE K+R FY+KRM EV + LGDEWKGYV R+ GGNDKQGFPMKQG++TN
Sbjct: 12 CQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQGFPMKQGIMTNG 71
Query: 215 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVXVRKGAQEIPGLTDGNVPR 394
RVRLL+SKGHSCYRPRR GERKRKSVRGCIVD+ LSVL+LV V+KG Q+IPGLTD +PR
Sbjct: 72 RVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDSQLSVLSLVIVKKGEQDIPGLTDNTIPR 131
Query: 395 RLGPKRASKIRKLFNLSXXXXXXXXXXXXXLPAKEGKXNAXPXXKAPXIXXLXTP 559
RLGPKR KIRK+FNLS LP KEGK KAP I L TP
Sbjct: 132 RLGPKRVGKIRKMFNLSKEDDVRQYVIRRPLPEKEGK---KAKSKAPKIQRLVTP 183
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 190 bits (463), Expect = 3e-47
Identities = 87/133 (65%), Positives = 105/133 (78%)
Frame = +2
Query: 38 QKLFEVVDEHKLRFFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 217
QK E+ D+ K F++KRMG V AD LG+E+KGYVL++ GGNDKQGFPM+QGVL R
Sbjct: 13 QKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQGFPMRQGVLFKGR 72
Query: 218 VRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVXVRKGAQEIPGLTDGNVPRR 397
VR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLAL V+KGA EI GLTD NVPRR
Sbjct: 73 VRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNVPRR 132
Query: 398 LGPKRASKIRKLF 436
LGPKR +K+R+LF
Sbjct: 133 LGPKRLTKLRRLF 145
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 185 bits (450), Expect = 1e-45
Identities = 88/135 (65%), Positives = 103/135 (76%)
Frame = +2
Query: 38 QKLFEVVDEHKLRFFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 217
QK E+ DE KL F EKR+G V D +G+E+ GYV R+ GGNDKQGFPM QGVLTN+R
Sbjct: 54 QKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQGFPMMQGVLTNNR 113
Query: 218 VRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVXVRKGAQEIPGLTDGNVPRR 397
VRLL KG CYRPR+ GE++RKSVRGCIV +LS L L V+KG EIPGLTD V ++
Sbjct: 114 VRLLFKKGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKGTNEIPGLTDKAVGKK 173
Query: 398 LGPKRASKIRKLFNL 442
LGPKRA+KIRKLFNL
Sbjct: 174 LGPKRATKIRKLFNL 188
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 179 bits (436), Expect = 6e-44
Identities = 83/135 (61%), Positives = 101/135 (74%)
Frame = +2
Query: 38 QKLFEVVDEHKLRFFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 217
QK E+ D+ K F +K+MG EV D LGDE+KGYV ++AGGNDK GFPMKQGV+ R
Sbjct: 13 QKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDGFPMKQGVMVRGR 72
Query: 218 VRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVXVRKGAQEIPGLTDGNVPRR 397
VRLL+S+GHSC+ RR G RKRKSVRGCIV ++ VLAL V+KG EI GLT +PR+
Sbjct: 73 VRLLLSEGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKKGVAEIDGLTTVTLPRK 132
Query: 398 LGPKRASKIRKLFNL 442
LGPKRA+ I+KLF L
Sbjct: 133 LGPKRANNIKKLFGL 147
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 164 bits (399), Expect = 2e-39
Identities = 75/147 (51%), Positives = 102/147 (69%)
Frame = +2
Query: 5 R*TFRXRQRXCQKLFEVVDEHKLRFFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQGF 184
R T + Q + ++ D L YEKR+G ++ ++LG ++KGY+ R+ GG DKQGF
Sbjct: 2 RITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQGF 61
Query: 185 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVXVRKGAQEI 364
PMKQGV+T R+RLL+ G SCYRPR+DGERKRK+VRGCI+ +S L V ++KG +EI
Sbjct: 62 PMKQGVITPRRIRLLLKTGASCYRPRKDGERKRKTVRGCIISDEISALHCVVLQKGEKEI 121
Query: 365 PGLTDGNVPRRLGPKRASKIRKLFNLS 445
GLT VPRR GPKRAS +R +F ++
Sbjct: 122 DGLTTTAVPRRFGPKRASTLRAMFGIT 148
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 159 bits (387), Expect = 5e-38
Identities = 84/136 (61%), Positives = 97/136 (71%)
Frame = +2
Query: 35 CQKLFEVVDEHKLRFFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 214
CQKLFEVVDEHKLR FYEKRMG V AD LGDEWKGY LR+AGGNDKQGFPMKQGVLT+
Sbjct: 12 CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHG 71
Query: 215 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVXVRKGAQEIPGLTDGNVPR 394
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV ++K P
Sbjct: 72 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 120
Query: 395 RLGPKRASKIRKLFNL 442
RLGP R+S I K++ L
Sbjct: 121 RLGPVRSSNISKIYYL 136
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 157 bits (381), Expect = 3e-37
Identities = 74/135 (54%), Positives = 97/135 (71%)
Frame = +2
Query: 41 KLFEVVDEHKLRFFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRV 220
K F+ +E R F +KR+G EV A LGDE+KGY+L++ GG DK GFPM GV TN+RV
Sbjct: 13 KKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGFPMMTGVATNNRV 72
Query: 221 RLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVXVRKGAQEIPGLTDGNVPRRL 400
RLL+ + CY+P R+GER+RK+VRG IV ++SVL + V+KG EI G+T+ +P R
Sbjct: 73 RLLLDGRNGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEGEIEGVTNDALPMRA 132
Query: 401 GPKRASKIRKLFNLS 445
GP+RAS RKLFNLS
Sbjct: 133 GPQRASHFRKLFNLS 147
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 141 bits (342), Expect = 1e-32
Identities = 70/134 (52%), Positives = 89/134 (66%)
Frame = +2
Query: 41 KLFEVVDEHKLRFFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRV 220
K + D K + + RM +E LG+E+ G R+ GGND QGFPM QGVL + R
Sbjct: 20 KSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGFPMYQGVLKSQRA 79
Query: 221 RLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVXVRKGAQEIPGLTDGNVPRRL 400
RLL+ +G CY RR+GERKRKS+RGCIV +L L++V V G + +PGLTD VP+RL
Sbjct: 80 RLLLRQGAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLVDAGDKTLPGLTDVVVPKRL 139
Query: 401 GPKRASKIRKLFNL 442
PKRASKIR+LF L
Sbjct: 140 VPKRASKIRRLFGL 153
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 134 bits (324), Expect = 2e-30
Identities = 78/176 (44%), Positives = 104/176 (59%), Gaps = 3/176 (1%)
Frame = +2
Query: 41 KLFEVVDEHKLRF-FYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 217
K FE+ DE R + R+G EV G E+KGY+ R+ GG+DK GFPM GVL +SR
Sbjct: 14 KQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKDGFPMVPGVLASSR 73
Query: 218 VRLLMSKGHSCYRPRR--DGERKRKSVRGCIVDANLSVLALVXVRKGAQEIPGLTDGNVP 391
V LL+ +G + R GER+RK+VRGC++ ++++++ + + G Q I G+TD P
Sbjct: 74 VSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDTTAP 133
Query: 392 RRLGPKRASKIRKLFNLSXXXXXXXXXXXXXLPAKEGKXNAXPXXKAPXIXXLXTP 559
RRLGPKRASKIRKLFNLS + K GK + KAP I L TP
Sbjct: 134 RRLGPKRASKIRKLFNLSRTEDVRKYVVRRRV-VKSGKKD---RLKAPKIQRLITP 185
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 124 bits (300), Expect = 2e-27
Identities = 62/95 (65%), Positives = 71/95 (74%)
Frame = +2
Query: 152 RVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLA 331
R GGNDKQG VL RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLA
Sbjct: 62 RFTGGNDKQG------VLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLA 115
Query: 332 LVXVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLF 436
L V+KGA EI GLTD NVPRRLGPKR +K+R+LF
Sbjct: 116 LQVVKKGANEIAGLTDQNVPRRLGPKRLTKLRRLF 150
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 113 bits (272), Expect = 4e-24
Identities = 57/133 (42%), Positives = 86/133 (64%)
Frame = +2
Query: 44 LFEVVDEHKLRFFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVR 223
+FE+ +++R Y+K++G + LG+E++G ++ + GG+D QGFPM G LT RVR
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVR 59
Query: 224 LLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVXVRKGAQEIPGLTDGNVPRRLG 403
L+SKG + YR RR G R+RKSVRG IV + VL L+ +R G +EI GLT+
Sbjct: 60 PLLSKGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHL 119
Query: 404 PKRASKIRKLFNL 442
P++ K+RK+F +
Sbjct: 120 PRKEKKLRKMFGV 132
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 105 bits (251), Expect = 2e-21
Identities = 55/138 (39%), Positives = 84/138 (60%), Gaps = 2/138 (1%)
Frame = +2
Query: 38 QKLFEVVDEHKLRFFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 217
Q E+ DE KLR Y K++ +++ +G EW + + GG DKQGFPMK+G+L+ SR
Sbjct: 13 QHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQGFPMKEGILSPSR 72
Query: 218 VRLLMSKGHSCYR--PRRDGERKRKSVRGCIVDANLSVLALVXVRKGAQEIPGLTDGNVP 391
V++L+ KG + R + GER RKSVRGCIV +SVL + + ++ +T+ N
Sbjct: 73 VKILLKKGSTGCRGYKMKKGERCRKSVRGCIVSPEISVLNIKLLTNKNDDLL-ITNKNSE 131
Query: 392 RRLGPKRASKIRKLFNLS 445
+ L KR+S +RK+ L+
Sbjct: 132 KTLTHKRSSNLRKVLCLT 149
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 101 bits (243), Expect = 1e-20
Identities = 44/66 (66%), Positives = 53/66 (80%)
Frame = +2
Query: 35 CQKLFEVVDEHKLRFFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 214
CQKL E DE K R FYEK M +EV AD LG+EWKGY++R++GGNDKQGFPMKQ VLT+
Sbjct: 12 CQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQGFPMKQDVLTHD 71
Query: 215 RVRLLM 232
R+ LL+
Sbjct: 72 RIHLLL 77
Score = 50.4 bits (115), Expect = 5e-05
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +2
Query: 356 QEIPGLTDGNVPRRLGPKRASKIRKLFNLS 445
++IPGLTD PR +GPKRAS+IRKLFNLS
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLS 109
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 60.5 bits (140), Expect = 4e-08
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +2
Query: 41 KLFEV-VDEHKLRFFYEKRMGAEVXADQLGDEW-KGYVLRVAGGNDKQGFPMKQGVLTNS 214
K F++ ++ R F KR+G V A LG E KG L + GG+D+ GFPM+ +
Sbjct: 133 KAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDIPGPV 192
Query: 215 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 319
+ R L+S G + PR GER+RK+VRG + ++
Sbjct: 193 KKRALLS-GPPGFWPREKGERRRKTVRGNTISEDI 226
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 60.5 bits (140), Expect = 4e-08
Identities = 33/91 (36%), Positives = 54/91 (59%)
Frame = +2
Query: 92 RMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDG 271
++G E LG KGY LR+ GG+DK GFPMK+ V R + L++ G + ++P + G
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVN-GGTGFKPTKKG 86
Query: 272 ERKRKSVRGCIVDANLSVLALVXVRKGAQEI 364
R+RK+VRG + ++S + + +G Q +
Sbjct: 87 LRRRKTVRGNTIADDISQINVKVSERGEQTL 117
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 60.1 bits (139), Expect = 6e-08
Identities = 37/108 (34%), Positives = 61/108 (56%)
Frame = +2
Query: 29 RXCQKLFEVVDEHKLRFFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLT 208
R QK+ E + ++L K++G +V + + D Y L++ GG D+ GFPM+ +
Sbjct: 14 RAYQKVVEGANANRL---IGKQIG-DVISGTIVDLPPDYELKITGGTDRDGFPMRPDLPG 69
Query: 209 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVXVRKG 352
+R RLL+S G +RP+ G RKRK VRG ++ ++ + V V+ G
Sbjct: 70 TARRRLLLSGGVG-FRPKEKGLRKRKGVRGRVISKDILQINTVVVKHG 116
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = +2
Query: 35 CQKLFEVVDEHKLRFFYEKRMGAEVXADQLGDEWK 139
CQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 12 CQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 56.8 bits (131), Expect = 5e-07
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 9/86 (10%)
Frame = +2
Query: 89 KRMGAEVXADQLG---DEWKGYV------LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKG 241
+R+G E+ A +LG E G L++ GG DK GFPM+ V RV++L+S+G
Sbjct: 32 RRIGEEIPASELGLNLSEIFGEEIPADAKLKITGGTDKDGFPMRPDVHGPRRVKILLSRG 91
Query: 242 HSCYRPRRDGERKRKSVRGCIVDANL 319
+RPR GER++K+V G + N+
Sbjct: 92 PG-FRPRERGERRKKTVHGNTISPNI 116
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 56.0 bits (129), Expect = 9e-07
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 9/79 (11%)
Frame = +2
Query: 89 KRMGAEVXADQL--------GDEWKGYV-LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKG 241
KR+G ++ A +L G E+ V L + GG DK GFPM+ + RVR+L+SKG
Sbjct: 32 KRIGDQIPAKELNINLNELFGKEFPEDVKLEIRGGTDKDGFPMRPDIHGPRRVRVLLSKG 91
Query: 242 HSCYRPRRDGERKRKSVRG 298
+RP+ GER++K+VRG
Sbjct: 92 PG-FRPKEKGERRKKTVRG 109
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 52.8 bits (121), Expect = 9e-06
Identities = 27/94 (28%), Positives = 54/94 (57%)
Frame = +2
Query: 89 KRMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRD 268
K++G E+ + E +GY L++ GG+D+ GF M+ + ++R+L+ +G Y +
Sbjct: 28 KKIGDEISGSIV--ELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLKEGPG-YNVKEK 84
Query: 269 GERKRKSVRGCIVDANLSVLALVXVRKGAQEIPG 370
G R+RKS+RG + +++++ V G+ + G
Sbjct: 85 GLRRRKSLRGNTISKDITLINTKVVEYGSAPLGG 118
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 51.6 bits (118), Expect = 2e-05
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Frame = +2
Query: 38 QKLFEVVDEHKLRFFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 217
Q L EV + KLR FYEK M E+ + +E N + F MKQ VL + R
Sbjct: 13 QILTEVDGKCKLRAFYEKCMTTEITVNFSCEE-----------NADKIFSMKQEVLIHFR 61
Query: 218 VRLLMSKGHS-CYRPRRDGERKRKSVRGCIVDANLSVLALVXVRKGAQEIPGLTDGNVPR 394
V LL++ HS Y+P R E S++ V +S+L +V + G ++IPG T P+
Sbjct: 62 VHLLLNNLHSYIYKPLRTREMNYTSLQDA-VKLPISLLNMVIIINGRKDIPGQTKRWAPK 120
Query: 395 R 397
R
Sbjct: 121 R 121
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 51.2 bits (117), Expect = 3e-05
Identities = 32/106 (30%), Positives = 54/106 (50%)
Frame = +2
Query: 56 VDEHKLRFFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMS 235
VD F + +GA V +G + GY + + GG+D G PM++ V + + +L+
Sbjct: 21 VDGQDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDDAGRPMREDVDGSDLMEVLL- 77
Query: 236 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVXVRKGAQEIPGL 373
+G + + P DGERKR +VRG V ++ L + G + + L
Sbjct: 78 EGGAGFNPDEDGERKRVTVRGKEVSEAVAQLNVAIDEHGEEPVAEL 123
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 50.4 bits (115), Expect = 5e-05
Identities = 33/128 (25%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Frame = +2
Query: 59 DEHKLRFFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSK 238
D+ + +++G + LG+++ + GG+DKQGF +K+ + T R+++ + K
Sbjct: 19 DDEFIEHIIGRKIGDTIEGSILGEDFSRNEFLINGGHDKQGFLLKKNLNTFERLKINVKK 78
Query: 239 GHSCYRP--RRDGERKRKSVRGCIVDANLSVLALVXVRKGAQEIPGLTDGNVPRRLGPKR 412
G R +R K+++VRG I+ + +S + LV + +E + ++L KR
Sbjct: 79 GSLGNRSHFKRKNLTKKRTVRGGILSSEISSINLVKLPNNVKE--SSVFPSKEQKLA-KR 135
Query: 413 ASKIRKLF 436
+K++ LF
Sbjct: 136 VTKLKTLF 143
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 50.4 bits (115), Expect = 5e-05
Identities = 33/76 (43%), Positives = 44/76 (57%)
Frame = +2
Query: 215 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVXVRKGAQEIPGLTDGNVPR 394
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV ++K P
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67
Query: 395 RLGPKRASKIRKLFNL 442
RLGP R+S I K++ L
Sbjct: 68 RLGPVRSSNISKIYYL 83
>UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S6e -
Sulfolobus solfataricus
Length = 214
Score = 50.4 bits (115), Expect = 5e-05
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = +2
Query: 56 VDEHKLRFFYEKRMGAEVXADQL-GDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLM 232
VD++K ++G A+QL G K L++ GG+D GFPM+ V+ ++ ++L+
Sbjct: 121 VDQNKATNLVGLKIGDVFEANQLIGLPVK---LKITGGSDNSGFPMRFDVIGAAKRKILL 177
Query: 233 SKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVXVR 346
S G + P +GER+RK++RG + + + + VR
Sbjct: 178 S-GPPGFYPNENGERRRKTIRGNTISQEIVQINTIIVR 214
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 49.6 bits (113), Expect = 8e-05
Identities = 26/68 (38%), Positives = 39/68 (57%)
Frame = +2
Query: 140 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 319
GY L + GG+D GFPM + + R+L+S G + PR GER+RK+VRG + ++
Sbjct: 146 GYKLLIRGGSDNSGFPMLPSIPGPVKKRVLLS-GPPGFHPREKGERRRKTVRGNTITHDI 204
Query: 320 SVLALVXV 343
+ V V
Sbjct: 205 VQINTVIV 212
>UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S6e -
Methanoregula boonei (strain 6A8)
Length = 143
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/69 (37%), Positives = 42/69 (60%)
Frame = +2
Query: 89 KRMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRD 268
K++G EV A LG GY + + GG+D+ G P ++ + R +LL+++G + P +
Sbjct: 32 KKIGDEVDAGPLG--LAGYKILITGGSDQTGTPARKSLPGAGRRKLLLAEGVG-FHPVME 88
Query: 269 GERKRKSVR 295
GERKRK +R
Sbjct: 89 GERKRKMIR 97
>UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S6e - Aeropyrum pernix
Length = 235
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +2
Query: 140 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV 307
G ++ GG D G PM GV + R ++L++ G + PR GER+RKSVRG ++
Sbjct: 155 GLKFKIRGGTDATGIPMHPGVPGSGRYKVLLA-GPPGFHPRERGERRRKSVRGRMI 209
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 44.0 bits (99), Expect = 0.004
Identities = 28/68 (41%), Positives = 38/68 (55%)
Frame = +2
Query: 95 MGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 274
+G+E A LG E K +R+ GG+DK G PM+ V +R +L+S+G R G
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDVHGPARKYVLLSRGVG-LRDAERGG 94
Query: 275 RKRKSVRG 298
R RK VRG
Sbjct: 95 RTRKLVRG 102
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 43.2 bits (97), Expect = 0.007
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Frame = -3
Query: 472 DITTYIIXFAKVEQLTDXXXXXXXXXXXXXXISQSRNFLGTLAHXNKSQDREIGVNNTST 293
D+ +I F + E+LT+ I ++R+ L ++ Q + ++ +T
Sbjct: 95 DVLADVIFFGQSEELTNLARTLRTTETRHFGIGEARDVGVALLDNDQVQHGNVLGDDATT 154
Query: 292 ----N*FTFSLSIAARSVT*VAL*HQKTNTAVCQDALFHRESLLVVAASDTKYIAFPFI 128
+ FT + ++AA + AL H++ +T V Q AL H E+LLVV D + ++ PF+
Sbjct: 155 ARLASAFTLASAVAAEAAR--ALGHEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 136
Score = 42.7 bits (96), Expect = 0.009
Identities = 25/78 (32%), Positives = 41/78 (52%)
Frame = +2
Query: 140 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 319
GY +++ GG D GF MK + R R+L + G Y P+ G+R+RK +RG + ++
Sbjct: 47 GYKVQITGGCDGSGFVMKPDLPGPRRQRILTATGVG-YVPKLPGQRRRKMMRGKEIAPDI 105
Query: 320 SVLALVXVRKGAQEIPGL 373
+ V G++ I L
Sbjct: 106 VQVNAKVVEYGSKSIKAL 123
>UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5;
Thermoplasmatales|Rep: 30S ribosomal protein S6e -
Thermoplasma volcanium
Length = 128
Score = 41.9 bits (94), Expect = 0.016
Identities = 27/92 (29%), Positives = 52/92 (56%)
Frame = +2
Query: 89 KRMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRD 268
+++G EV D + + GY +++ GG+ GF M+ + T + ++L+ K S YR ++
Sbjct: 32 RKIGEEV--DGVFFDLVGYKMKITGGSSVDGFAMRPDLQTQGKKQILV-KYTSGYR-GKN 87
Query: 269 GERKRKSVRGCIVDANLSVLALVXVRKGAQEI 364
G RKR + RG I+ ++++ + L + G I
Sbjct: 88 GIRKRITARGSIIGSDITQINLKITQYGPTPI 119
>UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S6e
- Candidatus Nitrosopumilus maritimus SCM1
Length = 137
Score = 39.5 bits (88), Expect = 0.086
Identities = 25/75 (33%), Positives = 39/75 (52%)
Frame = +2
Query: 95 MGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 274
+G E A +G K L++ GG+DK G PM+ + +R +L+SKG + G+
Sbjct: 33 LGQETDASVVGLNGK---LKLTGGSDKSGVPMRNDIHGAARKYVLLSKGVG-LQDAEKGQ 88
Query: 275 RKRKSVRGCIVDANL 319
R RK +RG V +
Sbjct: 89 RVRKLMRGNTVSEEI 103
>UniRef50_Q8ZX25 Cluster: 30S ribosomal protein S6e; n=5;
Thermoproteaceae|Rep: 30S ribosomal protein S6e -
Pyrobaculum aerophilum
Length = 148
Score = 38.7 bits (86), Expect = 0.15
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Frame = +2
Query: 47 FEVVDEHKLRFFYEKRMGAEVXADQLGDEW---KGYVLRVAGGNDKQGFPMKQGVLTNSR 217
FE+ D RF K +G E+ L D KG +R+ GG+ +G PM GV +
Sbjct: 19 FEIKDPLAQRFIGLK-IGDELDGVILKDLIELPKGAKIRITGGSGIEGAPMHPGVPGPVK 77
Query: 218 VRLLMSKGHSCYRPRRDGERKRKSVRG-CIVDANLSVLALVXVRKGAQEIPGLTDG 382
+ +++ G Y P + G +K+K VRG I D+ + + A++ K P + G
Sbjct: 78 -KYILADGPPGYWPPKKGMKKKKLVRGNTISDSIVQINAVIVYPKDYTGPPAIPLG 132
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 35.9 bits (79), Expect = 1.1
Identities = 15/49 (30%), Positives = 31/49 (63%)
Frame = +2
Query: 56 VDEHKLRFFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 202
++ + ++ Y K++G + ++G + GY L++ GG+D GFPM++ V
Sbjct: 22 IETKEPQWLYGKKIGDTIDGSKIGLD--GYELKITGGSDIAGFPMRKEV 68
>UniRef50_Q8TRJ6 Cluster: Glycosyltransferase; n=1; Methanosarcina
acetivorans|Rep: Glycosyltransferase - Methanosarcina
acetivorans
Length = 812
Score = 34.7 bits (76), Expect = 2.5
Identities = 13/61 (21%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +2
Query: 185 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV-DANLSVLALVXVRKGAQE 361
P K+ ++T++R ++L+ +SCY PR G+ + ++ + + ++++ +++ K Q
Sbjct: 405 PAKKNIITSNREKILVLATYSCYPPRGGGQHRLYNIYSLLAKEFDVTICSIIEANKQYQN 464
Query: 362 I 364
+
Sbjct: 465 L 465
>UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1;
Xylella fastidiosa Temecula1|Rep: Putative
uncharacterized protein - Xylella fastidiosa (strain
Temecula1 / ATCC 700964)
Length = 109
Score = 33.1 bits (72), Expect = 7.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 145 CTSCRWRQRQARIPDETGRPDKQPCSSSDVKG 240
C RWR ++ + DE G + PC+ DV+G
Sbjct: 19 CCMARWRCQEINVTDEVGYGMRLPCTPHDVRG 50
>UniRef50_A1TZN4 Cluster: Flagellar hook-associated protein FlgK;
n=2; Marinobacter|Rep: Flagellar hook-associated protein
FlgK - Marinobacter aquaeolei (strain ATCC 700491 / DSM
11845 / VT8)(Marinobacter hydrocarbonoclasticus (strain
DSM 11845))
Length = 688
Score = 33.1 bits (72), Expect = 7.5
Identities = 24/91 (26%), Positives = 42/91 (46%)
Frame = +2
Query: 170 DKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVXVRK 349
D P +Q VL+ ++ + +G + ++ K + +G + DAN + ++ +
Sbjct: 123 DPTSLPQRQLVLSEAQQLVNRFQGLNQEFIQQRESVKTQMQQG-VKDANTLLKSIAELNL 181
Query: 350 GAQEIPGLTDGNVPRRLGPKRASKIRKLFNL 442
E PGL G P L KR K+R+L L
Sbjct: 182 AISESPGLAQGREPLELMDKRDEKLRQLSEL 212
>UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4;
Actinomycetales|Rep: ATP-dependent helicase HrpA -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 1282
Score = 32.7 bits (71), Expect = 9.9
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 53 VVDEHKLRFFYEKRMGAEVXADQLGDEW 136
VVDEH L FY+ R+GA+V + D+W
Sbjct: 774 VVDEHTLFDFYDARVGADVVSGAHFDQW 801
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,350,617
Number of Sequences: 1657284
Number of extensions: 11661867
Number of successful extensions: 28136
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 27358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28116
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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