Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0425
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    26   1.1  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    26   1.1  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    26   1.4  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   3.3  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   4.4  
AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative odorant-b...    24   5.8  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   5.8  
AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    23   7.6  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = -2

Query: 164 RQRHEVHSLSIHRLTDQXLLRRPCAFRKRNEACARPPLRTTSGXPVAGXETFTS 3
           +Q+ ++HS  +   +     RRP        + + P L TTSG P A   +  S
Sbjct: 25  QQQQQLHSADVPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGEPRAAGSSSNS 78


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = -2

Query: 164 RQRHEVHSLSIHRLTDQXLLRRPCAFRKRNEACARPPLRTTSGXPVAGXETFTS 3
           +Q+ ++HS  +   +     RRP        + + P L TTSG P A   +  S
Sbjct: 25  QQQQQLHSADVPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGEPRAAGSSSNS 78


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 103 GAHALFVKETKLVLVHHFEQLLAXPLPGTKRLPR 2
           GAH +  +  K  L+  +    A P+P T R PR
Sbjct: 699 GAHGVGRRHIKNTLIAKYPDKYAYPIPHTTRPPR 732


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -2

Query: 326 RPRDWRQQYIHELIYVFSLHRGAVCNMSGPLTSEDEHGCLS 204
           +P+D+R+  +  L  VF   +GA+ ++    T ED  G  S
Sbjct: 856 KPKDFRKHSLLPLNNVFDRIKGALPHLKKSPTKEDATGGFS 896


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = -1

Query: 384 FPSVNPGISWAPLRTXTRAKTERLASTIHPR 292
           +P +  G + APLR+    + +++A+++HPR
Sbjct: 408 WPDLGVG-NMAPLRSIGLTELDQIAASMHPR 437


>AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative
           odorant-binding protein OBPjj2 protein.
          Length = 228

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 192 FIGNPCLSLPPATRS 148
           F GNPCL  PP  ++
Sbjct: 55  FAGNPCLKGPPVPKN 69


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 4/125 (3%)
 Frame = -2

Query: 401 LDGGXHFHQSIQEFPGHPCAQXQEPRPRDWRQQYIHELIYVFSLHRGAVCNMSGPLTSED 222
           +DGG +   S++ FPG+  A+ +       R        ++F LH   V N    L  ED
Sbjct: 167 VDGGLNIPHSVKRFPGY-SAENKSFNAEMHRD-------HIFGLH---VANYMRTLEEED 215

Query: 221 EHGCLS--GRPVSSGILACRCRQRHEVHSLSIHRL--TDQXLLRRPCAFRKRNEACARPP 54
           E        + +S GI A      ++    SI ++  + +   RR      R  +C  PP
Sbjct: 216 EEAFKRQFSKYISLGIKADDIENIYKNAHASIRKIPPSRRNPRRRSPRSGGRWPSCRSPP 275

Query: 53  LRTTS 39
            R  S
Sbjct: 276 ARRRS 280


>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 6/41 (14%)
 Frame = +1

Query: 136 ERLCTSCRWRQ----RQAR--IPDETGRPDKQPCSSSDVKG 240
           ER CT C  R     ++ R  +P     P  +PC SSD  G
Sbjct: 54  ERFCTLCDTRHFCECKETREPLPYMYACPGTEPCQSSDRLG 94


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,178
Number of Sequences: 2352
Number of extensions: 12752
Number of successful extensions: 29
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)