Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0422
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    26   0.99 
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   5.3  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    24   5.3  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   9.2  

>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 26.2 bits (55), Expect = 0.99
 Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
 Frame = +3

Query: 126 GNNGEKCM-LCTIWSPATEGNKGRSYQMHLDSWGWCRTRACLRCTRSFQGGQHS 284
           GN    CM L  +W      N G +Y +    W +    A +    SF GG  S
Sbjct: 232 GNPVNACMGLFVLWWGWLAFNSGSTYGVSGAKWAYAARAAVMTMMGSFGGGSFS 285


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 65  IFFELLCRDLNMLERVYTQVR 127
           I F+ +CRD+  L R+Y   R
Sbjct: 218 IEFQKVCRDIEYLTRLYVSYR 238


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydrogenase
            protein.
          Length = 1325

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 11/52 (21%), Positives = 19/52 (36%)
 Frame = +1

Query: 88   GSQHVGKGVHTSSVTTEKNVCYAPFGALQPRATKEGRIKCTLIPGDGVGPEL 243
            G   +G+G+HT  +         PF  +    T   ++  T       G +L
Sbjct: 1025 GGTEMGQGLHTKMIQVAATALGIPFDRIHISETSTDKVPNTSATAASAGSDL 1076


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 36  KFKHVLSXQEYFSSCYAGISTCWKGCT 116
           +FKH +  Q+Y +   A  + C   CT
Sbjct: 683 EFKHCVQCQQYKTGPLAEANECATNCT 709


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,134
Number of Sequences: 2352
Number of extensions: 14525
Number of successful extensions: 72
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)