Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0422
         (700 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81046-1|CAB02822.1|  379|Caenorhabditis elegans Hypothetical pr...   192   3e-49
AC006610-5|AAK85453.1|  373|Caenorhabditis elegans Hypothetical ...   132   3e-31
Z46242-1|CAA86325.2|  396|Caenorhabditis elegans Hypothetical pr...   127   9e-30
Z79755-1|CAB02111.2|  358|Caenorhabditis elegans Hypothetical pr...   115   4e-26
U41270-5|AAA82442.2|  364|Caenorhabditis elegans Hypothetical pr...    31   0.79 
Z81571-10|CAB04621.2|  341|Caenorhabditis elegans Hypothetical p...    31   1.0  
Z81571-1|CAB04610.1|  341|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z81504-5|CAB04120.2|  341|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z78065-4|CAB01514.2|  344|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z81487-3|CAB03997.2|  345|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z69883-4|CAA93742.2|  480|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z81504-2|CAB04119.1|  351|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AF016683-7|AAM97999.1|  609|Caenorhabditis elegans Hypothetical ...    27   9.8  

>Z81046-1|CAB02822.1|  379|Caenorhabditis elegans Hypothetical
           protein C37E2.1 protein.
          Length = 379

 Score =  192 bits (467), Expect = 3e-49
 Identities = 98/181 (54%), Positives = 123/181 (67%), Gaps = 3/181 (1%)
 Frame = +1

Query: 166 ALQPRATKEGRIKCTLIPGDGVGPELVYAVQEVFKAASIPXDFESFFFSEVNPTLSAPLE 345
           A +P      ++K T+IPGDGVGPEL+Y VQ++ K   IP +FE  F SEV+ T S+ +E
Sbjct: 32  APRPPTELNQKLKVTIIPGDGVGPELIYTVQDIVKQTGIPIEFEEIFLSEVHYTRSSSIE 91

Query: 346 DVVNSIAVNK-ICIKGILTTPDFSHT-GELQTLNMXLRXALDLYANVVHVKSLPNVKCXH 519
           + V SI  N  + +KG +      HT GELQ LNM LR +LDL+ANVVH+K+L  +K  H
Sbjct: 92  NAVESIGRNNNVALKGAIEESAVLHTEGELQGLNMRLRRSLDLFANVVHIKTLDGIKTRH 151

Query: 520 X-DVDCXIITEQTEGXYSALEHESVPGVXECLKIITASKSERIAKXAFDYTVKMGRKXVT 696
              +D  I+ EQTEG YS+LEHE VPGV ECLKI T +K+ERIAK AFDY  K GRK VT
Sbjct: 152 GKQLDFVIVREQTEGEYSSLEHELVPGVIECLKISTRTKAERIAKFAFDYATKTGRKKVT 211

Query: 697 A 699
           A
Sbjct: 212 A 212


>AC006610-5|AAK85453.1|  373|Caenorhabditis elegans Hypothetical
           protein C30F12.7 protein.
          Length = 373

 Score =  132 bits (318), Expect = 3e-31
 Identities = 68/175 (38%), Positives = 99/175 (56%)
 Frame = +1

Query: 175 PRATKEGRIKCTLIPGDGVGPELVYAVQEVFKAASIPXDFESFFFSEVNPTLSAPLEDVV 354
           P A   GR     +PGDG+GPE++  ++ +F     P +FE    S  +  L   ++  +
Sbjct: 28  PLAKYGGRHTVCALPGDGIGPEMIAHIRNIFSFCHAPVNFEEVQVS--SSLLDGDMDAAM 85

Query: 355 NSIAVNKICIKGILTTPDFSHTGELQTLNMXLRXALDLYANVVHVKSLPNVKCXHXDVDC 534
            +I  N + IKG + T       +  + N+ LR  LDLYAN++H  ++P V   H  +D 
Sbjct: 86  LAIERNGVAIKGNIETKH--DDPQFNSRNVELRTKLDLYANILHCVTIPTVPTRHSGIDI 143

Query: 535 XIITEQTEGXYSALEHESVPGVXECLKIITASKSERIAKXAFDYTVKMGRKXVTA 699
            +I E TEG YS LEHE+VPG+ E +KI+T  K ERI++ AF+Y    GRK VTA
Sbjct: 144 VLIRENTEGEYSGLEHEAVPGIVESIKIVTREKIERISRMAFEYAKANGRKKVTA 198


>Z46242-1|CAA86325.2|  396|Caenorhabditis elegans Hypothetical
           protein F35G12.2 protein.
          Length = 396

 Score =  127 bits (306), Expect = 9e-30
 Identities = 81/222 (36%), Positives = 117/222 (52%), Gaps = 10/222 (4%)
 Frame = +1

Query: 64  NIFRAVMQGSQHVGKGVHTSSVTTEKNVCYAPFGA--LQPRATK----EGRIKCTLIPGD 225
           N+    ++ S++V   V  + V T  N     F +  LQ   TK     GR   T++PGD
Sbjct: 4   NVLGHTLRSSKNV---VQKAFVATSPNSDMLRFRSPVLQTNTTKLARYGGRHNVTVLPGD 60

Query: 226 GVGPELVYAVQEVFKAASIPXDFESFFFSEVNPTLSAPLEDVVNSIAVNKICIKGILTTP 405
           G+GPE+++ V+ +  A   P DFE    +      S  L + + +I  N + +KG + T 
Sbjct: 61  GIGPEMLHHVERILSAVQAPVDFEVVNLTSKEDA-SEDLAEAITAIKRNGVALKGNIETK 119

Query: 406 DFSHTGELQTLNMXLRXALDLYANVVHVKSLPNVKCXHXDVDCXIITEQTEGXYSALEHE 585
            F +   +   N+ LR  L+LYANV+H  ++P V   H  +D  II E TEG YS  EHE
Sbjct: 120 -FDNPSFVSR-NLELRRQLNLYANVLHCSTIPTVPSRHTGIDMVIIRENTEGEYSGNEHE 177

Query: 586 SV----PGVXECLKIITASKSERIAKXAFDYTVKMGRKXVTA 699
           +V    P V E LK++T  KSE+I + AF +  K GRK VTA
Sbjct: 178 AVNAPHPRVVESLKVVTREKSEQITRFAFQFAKKYGRKKVTA 219


>Z79755-1|CAB02111.2|  358|Caenorhabditis elegans Hypothetical
           protein F43G9.1 protein.
          Length = 358

 Score =  115 bits (276), Expect = 4e-26
 Identities = 67/169 (39%), Positives = 97/169 (57%), Gaps = 3/169 (1%)
 Frame = +1

Query: 202 KCTLIPGDGVGPELVYAVQEVFKAASIPXDFESFFFSEV---NPTLSAPLEDVVNSIAVN 372
           + TLIPGDG+GPE+  +VQ++F+AA  P  ++    + V   +     P    +  +  N
Sbjct: 26  RVTLIPGDGIGPEISASVQKIFEAADAPIAWDPVDVTPVKGRDGVFRIPSR-CIELMHAN 84

Query: 373 KICIKGILTTPDFSHTGELQTLNMXLRXALDLYANVVHVKSLPNVKCXHXDVDCXIITEQ 552
           K+ +KG L TP     G  ++LN+ +R    LYANV   +SL   K  + +VD   I E 
Sbjct: 85  KVGLKGPLETP--IGKGH-RSLNLAVRKEFSLYANVRPCRSLEGHKTLYDNVDVVTIREN 141

Query: 553 TEGXYSALEHESVPGVXECLKIITASKSERIAKXAFDYTVKMGRKXVTA 699
           TEG YS +EHE VPGV + +K+IT + S  +A  AF+Y  + GRK VTA
Sbjct: 142 TEGEYSGIEHEIVPGVVQSIKLITETASRNVASFAFEYARQNGRKVVTA 190


>U41270-5|AAA82442.2|  364|Caenorhabditis elegans Hypothetical
           protein AH9.4 protein.
          Length = 364

 Score = 31.1 bits (67), Expect = 0.79
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +1

Query: 373 KICIKGILTTPDFSHTGELQTLNMXLRXALDLYANVVHVKSLPNVKCXH 519
           +  I G  TT  FSHTGE  TL+     AL +  ++    + P+VK  H
Sbjct: 217 RYAISGPATTKRFSHTGETDTLDNKAHVALAI--SITASTNTPSVKRIH 263


>Z81571-10|CAB04621.2|  341|Caenorhabditis elegans Hypothetical
           protein M01G12.13 protein.
          Length = 341

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -2

Query: 261 FLYSVDKLGSYTIPRNQGAFDTTFLCCPRLQGSKWCITYIFL 136
           +L ++  +G  +IP N   F   +   P++QG K+C+ Y+ L
Sbjct: 15  YLLTLHIIGGISIPINLIGFYLVWFQSPKMQGYKYCLCYLQL 56


>Z81571-1|CAB04610.1|  341|Caenorhabditis elegans Hypothetical
           protein M01G12.1 protein.
          Length = 341

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -2

Query: 261 FLYSVDKLGSYTIPRNQGAFDTTFLCCPRLQGSKWCITYIFL 136
           +L ++  +G  +IP N   F   +   P++QG K+C+ Y+ L
Sbjct: 15  YLLTLHIIGGISIPINLIGFYLVWFQSPKMQGYKYCLCYLQL 56


>Z81504-5|CAB04120.2|  341|Caenorhabditis elegans Hypothetical
           protein M01G12.13 protein.
          Length = 341

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -2

Query: 261 FLYSVDKLGSYTIPRNQGAFDTTFLCCPRLQGSKWCITYIFL 136
           +L ++  +G  +IP N   F   +   P++QG K+C+ Y+ L
Sbjct: 15  YLLTLHIIGGISIPINLIGFYLVWFQSPKMQGYKYCLCYLQL 56


>Z78065-4|CAB01514.2|  344|Caenorhabditis elegans Hypothetical
           protein T09E8.5 protein.
          Length = 344

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -2

Query: 261 FLYSVDKLGSYTIPRNQGAFDTTFLCCPRLQGSKWCITYI 142
           +L ++  +G  +IP N  A    +   P + G K+C+TY+
Sbjct: 13  YLLTLSIIGGISIPMNLLALYMIWFQSPGMHGYKYCLTYM 52


>Z81487-3|CAB03997.2|  345|Caenorhabditis elegans Hypothetical
           protein C54E10.4 protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = -2

Query: 261 FLYSVDKLGSYTIPRNQGAFDTTFLCCPRLQGSKWCITYI 142
           ++ ++  +G+ +IP N   F   +   P +QG K+C+ Y+
Sbjct: 13  YMPTLHVIGAISIPMNVLGFYMVWFQSPGMQGYKYCLCYM 52


>Z69883-4|CAA93742.2|  480|Caenorhabditis elegans Hypothetical
           protein C27C12.5 protein.
          Length = 480

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
 Frame = +1

Query: 175 PRATK--EGRIKCTLIPGDGVGP-------ELVYAVQEVFKAASIPXDFESFFFSEVNPT 327
           P ATK  E R+  + +P   + P        L Y + +  K   IP D+      ++   
Sbjct: 83  PTATKIDEYRLPTSFLPSISICPYGFKTDDNLFYLITQGDKDVYIPPDYWKNSSKQLLKR 142

Query: 328 LSAPLEDVVNSIAVN 372
           LS   EDVV SI +N
Sbjct: 143 LSYKCEDVVESIMIN 157


>Z81504-2|CAB04119.1|  351|Caenorhabditis elegans Hypothetical
           protein F15H9.2 protein.
          Length = 351

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 240 LGSYTIPRNQGAFDTTFLCCPRLQGSKWCITYI 142
           +   +IP N  AF   +   P++QG K+C+ Y+
Sbjct: 22  IAGISIPINFIAFYLVWFQSPKMQGYKYCLCYL 54


>AF016683-7|AAM97999.1|  609|Caenorhabditis elegans Hypothetical
           protein K09F6.9 protein.
          Length = 609

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 324 WIHFRKEKGFKVXWNAGRLENFLYSVDKLGSYTIPR 217
           WIHF+  +   V + A + +N  + V+ L     PR
Sbjct: 62  WIHFKNREPINVTFPAAQYDNLSHVVNSLNGVQKPR 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,036,029
Number of Sequences: 27780
Number of extensions: 318876
Number of successful extensions: 769
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)