Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0422
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g17130.1 68415.m01977 isocitrate dehydrogenase subunit 2 / NA... 143 1e-34
At4g35260.1 68417.m05011 isocitrate dehydrogenase subunit 1 / NA... 141 4e-34
At4g35650.1 68417.m05062 isocitrate dehydrogenase, putative / NA... 140 6e-34
At3g09810.1 68416.m01169 isocitrate dehydrogenase, putative / NA... 134 5e-32
At2g17130.2 68415.m01978 isocitrate dehydrogenase subunit 2 / NA... 133 9e-32
At5g03290.1 68418.m00279 isocitrate dehydrogenase, putative / NA... 126 1e-29
At1g32480.1 68414.m04008 isocitrate/isopropylmalate dehydrogenas... 80 2e-15
At1g31180.1 68414.m03817 3-isopropylmalate dehydrogenase, chloro... 36 0.020
At1g80560.1 68414.m09445 3-isopropylmalate dehydrogenase, chloro... 33 0.18
At5g14200.1 68418.m01659 3-isopropylmalate dehydrogenase, chloro... 32 0.42
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 32 0.42
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 31 0.73
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 29 2.2
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 29 2.2
At3g24180.1 68416.m03035 expressed protein contains Pfam domain ... 28 5.2
At1g14820.3 68414.m01773 SEC14 cytosolic factor family protein /... 28 5.2
At1g14820.2 68414.m01772 SEC14 cytosolic factor family protein /... 28 5.2
At1g14820.1 68414.m01771 SEC14 cytosolic factor family protein /... 28 5.2
At5g20030.1 68418.m02383 agenet domain-containing protein contai... 28 6.8
>At2g17130.1 68415.m01977 isocitrate dehydrogenase subunit 2 / NAD+
isocitrate dehydrogenase subunit 2 nearly identical to
NAD+ dependent isocitrate dehydrogenase subunit 2
[Arabidopsis thaliana] GI:1766048
Length = 367
Score = 143 bits (346), Expect = 1e-34
Identities = 80/164 (48%), Positives = 104/164 (63%)
Frame = +1
Query: 208 TLIPGDGVGPELVYAVQEVFKAASIPXDFESFFFSEVNPTLSAPLEDVVNSIAVNKICIK 387
TLIPGDGVGP + AVQ+V +A P FE F EV+ + + E ++ SI NK+C+K
Sbjct: 41 TLIPGDGVGPLVTNAVQQVMEAMHAPVYFEPF---EVHGDMKSLPEGLLESIKKNKVCLK 97
Query: 388 GILTTPDFSHTGELQTLNMXLRXALDLYANVVHVKSLPNVKCXHXDVDCXIITEQTEGXY 567
G L TP G + +LN+ LR LDL+A++V+ +LP + H +VD +I E TEG Y
Sbjct: 98 GGLKTPV---GGGVSSLNVNLRKELDLFASLVNCFNLPGLASRHENVDIVVIRENTEGEY 154
Query: 568 SALEHESVPGVXECLKIITASKSERIAKXAFDYTVKMGRKXVTA 699
+ LEHE VPGV E LK+IT SERIAK AF+Y RK VTA
Sbjct: 155 AGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTA 198
>At4g35260.1 68417.m05011 isocitrate dehydrogenase subunit 1 / NAD+
isocitrate dehydrogenase subunit 1 nearly identical to
NAD+ dependent isocitrate dehydrogenase subunit 1
[Arabidopsis thaliana] GI:1766046
Length = 367
Score = 141 bits (342), Expect = 4e-34
Identities = 89/200 (44%), Positives = 117/200 (58%), Gaps = 1/200 (0%)
Frame = +1
Query: 103 GKGVHTSSVTTEKNVCYAPF-GALQPRATKEGRIKCTLIPGDGVGPELVYAVQEVFKAAS 279
G G+ T SVT Y P G PRA TLIPGDG+GP + AV++V +A
Sbjct: 18 GSGIQTRSVT------YMPRPGDGAPRAV-------TLIPGDGIGPLVTNAVEQVMEAMH 64
Query: 280 IPXDFESFFFSEVNPTLSAPLEDVVNSIAVNKICIKGILTTPDFSHTGELQTLNMXLRXA 459
P FE + +V+ +S +V+ SI NK+C+KG L TP G + +LN+ LR
Sbjct: 65 APIFFEKY---DVHGEMSRVPPEVMESIRKNKVCLKGGLKTPV---GGGVSSLNVQLRKE 118
Query: 460 LDLYANVVHVKSLPNVKCXHXDVDCXIITEQTEGXYSALEHESVPGVXECLKIITASKSE 639
LDL+A++V+ +LP + H +VD +I E TEG Y+ LEHE VPGV E LK+IT SE
Sbjct: 119 LDLFASLVNCFNLPGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSE 178
Query: 640 RIAKXAFDYTVKMGRKXVTA 699
RIAK AF+Y RK VTA
Sbjct: 179 RIAKYAFEYAYLNNRKKVTA 198
>At4g35650.1 68417.m05062 isocitrate dehydrogenase, putative / NAD+
isocitrate dehydrogenase, putative strong similarity to
NAD+ dependent isocitrate dehydrogenase subunit 1
[Arabidopsis thaliana] GI:1766046
Length = 368
Score = 140 bits (340), Expect = 6e-34
Identities = 76/164 (46%), Positives = 103/164 (62%)
Frame = +1
Query: 208 TLIPGDGVGPELVYAVQEVFKAASIPXDFESFFFSEVNPTLSAPLEDVVNSIAVNKICIK 387
TLIPGDG+GP + AV++V +A P FE + EV + E+V+ S+ NK+C+K
Sbjct: 42 TLIPGDGIGPLVTGAVEQVMEAMHAPVHFERY---EVLGNMRKVPEEVIESVKRNKVCLK 98
Query: 388 GILTTPDFSHTGELQTLNMXLRXALDLYANVVHVKSLPNVKCXHXDVDCXIITEQTEGXY 567
G L TP G + +LNM LR LD++A++V+ ++P + H +VD +I E TEG Y
Sbjct: 99 GGLATPV---GGGVSSLNMQLRKELDIFASLVNCINVPGLVTRHENVDIVVIRENTEGEY 155
Query: 568 SALEHESVPGVXECLKIITASKSERIAKXAFDYTVKMGRKXVTA 699
S LEHE VPGV E LK+IT SERIA+ AF+Y RK VTA
Sbjct: 156 SGLEHEVVPGVVESLKVITKFCSERIARYAFEYAYLNNRKKVTA 199
>At3g09810.1 68416.m01169 isocitrate dehydrogenase, putative / NAD+
isocitrate dehydrogenase, putative strong similarity to
isocitrate dehydrogenase (NAD+) GB:CAA65502 GI:3021506
[Nicotiana tabacum]
Length = 374
Score = 134 bits (324), Expect = 5e-32
Identities = 79/169 (46%), Positives = 104/169 (61%), Gaps = 2/169 (1%)
Frame = +1
Query: 199 IKCTLIPGDGVGPELVYAVQEVFKAASIPXDF-ESFFFSEVNPTLSAPLE-DVVNSIAVN 372
IK TL PGDG+GPE+ +V++VF AA + D+ E F +EV+P ++ L D + S+ N
Sbjct: 44 IKATLFPGDGIGPEIAESVKQVFTAADVVIDWDEQFVGTEVDPRTNSFLTWDNLQSVLKN 103
Query: 373 KICIKGILTTPDFSHTGELQTLNMXLRXALDLYANVVHVKSLPNVKCXHXDVDCXIITEQ 552
K+ +KG + TP G ++LN+ LR L+LYANV SLP K + DVD I E
Sbjct: 104 KVGLKGPMATP--IGKGH-RSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVDLITIREN 160
Query: 553 TEGXYSALEHESVPGVXECLKIITASKSERIAKXAFDYTVKMGRKXVTA 699
TEG YS LEH+ V GV E LKIIT S R+A+ AF Y GRK V+A
Sbjct: 161 TEGEYSGLEHQVVKGVVESLKIITRKASMRVAEYAFLYAKTHGRKKVSA 209
>At2g17130.2 68415.m01978 isocitrate dehydrogenase subunit 2 / NAD+
isocitrate dehydrogenase subunit 2 nearly identical to
NAD+ dependent isocitrate dehydrogenase subunit 2
[Arabidopsis thaliana] GI:1766048
Length = 363
Score = 133 bits (322), Expect = 9e-32
Identities = 78/164 (47%), Positives = 101/164 (61%)
Frame = +1
Query: 208 TLIPGDGVGPELVYAVQEVFKAASIPXDFESFFFSEVNPTLSAPLEDVVNSIAVNKICIK 387
TLIPGDGVGP + AVQ+V +A P FE F EV+ + + E ++ SI NK+C+K
Sbjct: 41 TLIPGDGVGPLVTNAVQQVMEAMHAPVYFEPF---EVHGDMKSLPEGLLESIKKNKVCLK 97
Query: 388 GILTTPDFSHTGELQTLNMXLRXALDLYANVVHVKSLPNVKCXHXDVDCXIITEQTEGXY 567
G L TP G + +LN+ LR LDL+A++V+ +LP + H +VD +I E TEG Y
Sbjct: 98 GGLKTPV---GGGVSSLNVNLRKELDLFASLVNCFNLPGLASRHENVDIVVIRENTEGEY 154
Query: 568 SALEHESVPGVXECLKIITASKSERIAKXAFDYTVKMGRKXVTA 699
+ LEHE VPGV E LK SERIAK AF+Y RK VTA
Sbjct: 155 AGLEHEVVPGVVESLKFC----SERIAKYAFEYAYLNNRKKVTA 194
>At5g03290.1 68418.m00279 isocitrate dehydrogenase, putative / NAD+
isocitrate dehydrogenase, putative strong similarity to
isocitrate dehydrogenase (NAD+) [Nicotiana tabacum]
GI:3021506
Length = 374
Score = 126 bits (305), Expect = 1e-29
Identities = 73/169 (43%), Positives = 102/169 (60%), Gaps = 2/169 (1%)
Frame = +1
Query: 199 IKCTLIPGDGVGPELVYAVQEVFKAASIPXDFESFFF-SEVNPTLSAPLE-DVVNSIAVN 372
I TL PGDG+GPE+ +V++VF A +P ++E + +E++P + L + + S+ N
Sbjct: 44 ITATLFPGDGIGPEIAESVKKVFTTAGVPIEWEEHYVGTEIDPRTQSFLTWESLESVRRN 103
Query: 373 KICIKGILTTPDFSHTGELQTLNMXLRXALDLYANVVHVKSLPNVKCXHXDVDCXIITEQ 552
K+ +KG + TP G ++LN+ LR L+LYANV SLP K + DVD I E
Sbjct: 104 KVGLKGPMATP--IGKGH-RSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVDLITIREN 160
Query: 553 TEGXYSALEHESVPGVXECLKIITASKSERIAKXAFDYTVKMGRKXVTA 699
TEG YS LEH+ V GV E LKIIT S R+A+ AF Y GR+ V+A
Sbjct: 161 TEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFLYAKTHGRERVSA 209
>At1g32480.1 68414.m04008 isocitrate/isopropylmalate dehydrogenase
family protein similar to NAD+ dependent isocitrate
dehydrogenase subunit 2 [Arabidopsis thaliana]
GI:1766048; contains Pfam profile PF00180 dehydrogenase,
isocitrate/isopropylmalate family
Length = 294
Score = 79.8 bits (188), Expect = 2e-15
Identities = 55/151 (36%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Frame = +1
Query: 250 AVQEVFKAASIPXDFESFFFSEVNPTLSAPLEDVVNSIAVNKICIKGILTTPDFSHTGEL 429
AV +V A P FE++ N ++ +VV+SI NK+C+ G +
Sbjct: 15 AVHQVMDAMQAPVYFETYIIKGKN--MNHLTWEVVDSIRKNKVCLNGRVNN--------- 63
Query: 430 QTLNMXLRXALDLYANVVHVKSLPNVKCXHXDVDCXIITEQTEGXYSALEHESVPGVXEC 609
+L R LDL+A++V +L H +VD +I E TEG Y+ EHE VPGV E
Sbjct: 64 -SLCGGARKELDLFASLVDCFNLNGQPSRHENVDIVVIRENTEGEYAGREHEVVPGVIES 122
Query: 610 LKI-ITASKSERIAKXAFDYTVKMGRKXVTA 699
++ +T S+RIAK AF+Y RK VTA
Sbjct: 123 FQVTMTKFWSDRIAKYAFEYAHFSKRKKVTA 153
>At1g31180.1 68414.m03817 3-isopropylmalate dehydrogenase,
chloroplast, putative strong similarity to SP|P29102
3-isopropylmalate dehydrogenase, chloroplast precursor
{Brassica napus}; EST gb|F14478 comes from this gene
Length = 404
Score = 36.3 bits (80), Expect = 0.020
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 23/179 (12%)
Frame = +1
Query: 196 RIKCTLIPGDGVGPELVYAVQEVFKAA----SIPXDFESF-FFSEVNPTLSAPLEDVVN- 357
R TL+PGDG+GPE++ + V + A + DF+ F + PL + +
Sbjct: 43 RYNITLLPGDGIGPEVISVAKNVLQKAGFLQGLEFDFQEMPFGGAALDLVGVPLPEETST 102
Query: 358 ----SIAVNKICIKGILTTPDFSH-TGELQTLNMXLRXALDLYANVVHVKSLPNV----- 507
S A+ I G + H E+ LN +R L+++AN+ LP +
Sbjct: 103 AAKQSDAILLGAIGGYKWDKNEKHLRPEMGLLN--IRRDLNVFANLRPATVLPQLVDAST 160
Query: 508 --KCXHXDVDCXIITEQTEGXY-----SALEHESVPGVXECLKIITASKSERIAKXAFD 663
K VD I+ E T G Y +E+ V +I A + +RIA+ AF+
Sbjct: 161 LKKEVAQGVDMMIVRELTGGIYFGEPRGITINENGEEVGFNTEIYAAHEIDRIARVAFE 219
>At1g80560.1 68414.m09445 3-isopropylmalate dehydrogenase,
chloroplast, putative strong similarity to
3-ISOPROPYLMALATE DEHYDROGENASE PRECURSOR GB:P29102
SP|P29102 from [Brassica napus]
Length = 405
Score = 33.1 bits (72), Expect = 0.18
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 23/179 (12%)
Frame = +1
Query: 196 RIKCTLIPGDGVGPELVYAVQEVFKAASIPXDFESFFFSEVN------PTLSAPL-EDVV 354
R TL+PGDG+GPE+V + V + A E F F E+ + PL E+ +
Sbjct: 42 RYTITLLPGDGIGPEVVSIAKNVLQQAGSLEGVE-FNFREMPIGGAALDLVGVPLPEETI 100
Query: 355 N----SIAVNKICIKGILTTPDFSHTGELQTLNMXLRXALDLYANVVHVKSLPNV----- 507
+ S AV I G + H + L + +R AL ++AN+ LP +
Sbjct: 101 SAAKESDAVLLGAIGGYKWDNNEKHLRPEKGL-LQIRAALKVFANLRPATVLPQLVDAST 159
Query: 508 --KCXHXDVDCXIITEQTEGXY-----SALEHESVPGVXECLKIITASKSERIAKXAFD 663
+ VD ++ E T G Y +E+ V ++ A + +RIA+ AF+
Sbjct: 160 LKREVAEGVDLMVVRELTGGIYFGEPRGIKTNENGEEVGFNTEVYAAHEIDRIARVAFE 218
>At5g14200.1 68418.m01659 3-isopropylmalate dehydrogenase,
chloroplast, putative strong similarity to SP|P29102
3-isopropylmalate dehydrogenase, chloroplast precursor
{Brassica napus}
Length = 409
Score = 31.9 bits (69), Expect = 0.42
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 196 RIKCTLIPGDGVGPELVYAVQEVFKAASIPXDFESFFFSEVNPTLSAPLE 345
R L+PGDG+GPE++ + V + A E F F E+ P A L+
Sbjct: 46 RYNIALLPGDGIGPEVISVAKNVLQKAGSLEGLE-FDFKEM-PVGGAALD 93
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 31.9 bits (69), Expect = 0.42
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = -3
Query: 677 IFTV*SKAXFAIRSDFDAVMIFKHSXTPGTDSCSKAEYXPSVC--SVMMXQSTSWCXHFT 504
+ T+ K F + F +I KH PG CS+ Y + ++ + S HFT
Sbjct: 193 VSTLAVKDDFLVAGGFQGELICKHLDRPGVSFCSRMTYDDNAITNAIEIYNKPSGALHFT 252
Query: 503 LGND 492
N+
Sbjct: 253 ASNN 256
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 31.1 bits (67), Expect = 0.73
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = -3
Query: 650 FAIRSDFDAVMIFKHSXTPGTDSCSKAEYXPSVC--SVMMXQSTSWCXHFTLGND 492
F + F +I KH PG CS+ Y + ++ + S HFT N+
Sbjct: 200 FLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAIEIYNKPSGALHFTASNN 254
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -3
Query: 677 IFTV*SKAXFAIRSDFDAVMIFKHSXTPGTDSCSKAEYXPSVC--SVMMXQSTSWCXHFT 504
+ T+ K + F +I KH PG CS+ Y + +V + +++S HF
Sbjct: 193 VSTLAVKERLLVAGGFQGELICKHLDRPGVSFCSRTTYTENAITNAVDIYRNSSGALHFM 252
Query: 503 LGND 492
N+
Sbjct: 253 ASNN 256
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -3
Query: 677 IFTV*SKAXFAIRSDFDAVMIFKHSXTPGTDSCSKAEYXPSVC--SVMMXQSTSWCXHFT 504
+ T+ K + F +I KH PG CS+ Y + +V + +++S HF
Sbjct: 187 VSTLAVKERLLVAGGFQGELICKHLDRPGVSFCSRTTYTENAITNAVDIYRNSSGALHFM 246
Query: 503 LGND 492
N+
Sbjct: 247 ASNN 250
>At3g24180.1 68416.m03035 expressed protein contains Pfam domain
PF04685: Protein of unknown function, DUF608
Length = 950
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 156 TIWSPATEGNKGRSYQMHLDSWGW 227
++ SP G+ G+S L SWGW
Sbjct: 156 SVLSPGQHGSLGKSRDKGLSSWGW 179
>At1g14820.3 68414.m01773 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; similar to
phosphatidylinositol/phosphatidylcholine transfer
protein SP:P24280 [Saccharomyces cerevisiae (Baker's
yeast)]
Length = 252
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 241 LVYAVQEVFKAASIPXDFESFFFSEVNPTLSAPLEDVVNSIAVNKICIKG 390
LV + KAA + D++ + S V PT P +V + + K+C++G
Sbjct: 35 LVARSMDPVKAAKMFVDWQKWRASMVPPTGFIPESEVQDELEFRKVCLQG 84
>At1g14820.2 68414.m01772 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; similar to
phosphatidylinositol/phosphatidylcholine transfer
protein SP:P24280 [Saccharomyces cerevisiae (Baker's
yeast)]
Length = 239
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 241 LVYAVQEVFKAASIPXDFESFFFSEVNPTLSAPLEDVVNSIAVNKICIKG 390
LV + KAA + D++ + S V PT P +V + + K+C++G
Sbjct: 22 LVARSMDPVKAAKMFVDWQKWRASMVPPTGFIPESEVQDELEFRKVCLQG 71
>At1g14820.1 68414.m01771 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; similar to
phosphatidylinositol/phosphatidylcholine transfer
protein SP:P24280 [Saccharomyces cerevisiae (Baker's
yeast)]
Length = 239
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 241 LVYAVQEVFKAASIPXDFESFFFSEVNPTLSAPLEDVVNSIAVNKICIKG 390
LV + KAA + D++ + S V PT P +V + + K+C++G
Sbjct: 22 LVARSMDPVKAAKMFVDWQKWRASMVPPTGFIPESEVQDELEFRKVCLQG 71
>At5g20030.1 68418.m02383 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 326
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 594 RRGGVLEDHHRIEIRAYREXRFRLHREDGP 683
R+G D HR+E+ AYR RLH GP
Sbjct: 257 RKGSEAADVHRLELDAYRSSIERLH-ASGP 285
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,195,583
Number of Sequences: 28952
Number of extensions: 296455
Number of successful extensions: 722
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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