Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0420
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   6.0  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   8.0  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   8.0  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   8.0  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   8.0  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   8.0  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 687 FSHCIY*IFCTFLTLMEYVNIC 622
           F  CIY  FC F+    ++  C
Sbjct: 162 FLLCIYHFFCAFIIFTMHLLFC 183


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 169 EDESDEEDQAKSAKIR 216
           EDESDEE    S K++
Sbjct: 83  EDESDEEKPTTSFKLK 98


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 134 HSNLRQHQNGQMKMKAMRRIKPKVLKFV 217
           HS++ QH +  MKM   +     +LK V
Sbjct: 101 HSSIHQHHHDPMKMSLDKSGGSDLLKAV 128


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 432 IRKFNPHFSISKCFLFKIEN 373
           I+  N    I+ C LFKI+N
Sbjct: 192 IKLSNDKLEITACRLFKIDN 211


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 304 ILKFVATEVTEGEVLDETTVKKLVLNFEKKALRNREMR 417
           I++ V   +  G+V DE+T   LVLN     + N E++
Sbjct: 330 IVRTVCLCLFGGKVNDESTQPMLVLNSVSADVYNLEIQ 367


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 304 ILKFVATEVTEGEVLDETTVKKLVLNFEKKALRNREMR 417
           I++ V   +  G+V DE+T   LVLN     + N E++
Sbjct: 330 IVRTVCLCLFGGKVNDESTQPMLVLNSVSADVYNLEIQ 367


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 134 HSNLRQHQNGQMKMKAMRRIKPKVLKFV 217
           HS++ QH +  MKM   +     +LK V
Sbjct: 252 HSSIHQHHHDPMKMSLDKSGGSDLLKAV 279


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 134 HSNLRQHQNGQMKMKAMRRIKPKVLKFV 217
           HS++ QH +  MKM   +     +LK V
Sbjct: 311 HSSIHQHHHDPMKMSLDKSGGSDLLKAV 338


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,063
Number of Sequences: 336
Number of extensions: 3232
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)