Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0420
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1334 - 35765973-35766068,35766272-35766353,35766448-357664... 86 2e-17
03_01_0027 - 250837-250877,250972-252909,253733-253805,254476-25... 33 0.18
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 32 0.56
06_02_0305 + 14111798-14111843,14112645-14113111,14113299-14113667 31 0.74
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748... 30 1.7
04_01_0129 + 1408408-1409055,1409107-1410013,1410145-1410294,141... 30 2.3
02_05_0156 + 26341904-26342801,26343469-26344148 30 2.3
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 29 3.9
08_02_0274 - 15192670-15192983,15193110-15193200,15193295-151936... 29 5.2
06_03_1263 + 28828048-28828347 29 5.2
05_03_0634 + 16432679-16433076,16433358-16433610,16433993-164342... 29 5.2
04_04_0378 - 24822436-24822521,24822623-24822738,24823010-248230... 29 5.2
03_06_0562 + 34732027-34733121 28 6.9
01_06_1357 + 36632992-36633621,36634003-36635136,36635525-366361... 28 6.9
11_06_0289 - 21969248-21973516 28 9.1
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 28 9.1
02_02_0539 - 11315788-11315841,11316620-11316700,11316728-11317711 28 9.1
>02_05_1334 -
35765973-35766068,35766272-35766353,35766448-35766485,
35766601-35766657,35766795-35766858,35766947-35767043,
35767604-35767656,35767837-35767921,35768649-35769675
Length = 532
Score = 86.2 bits (204), Expect = 2e-17
Identities = 44/98 (44%), Positives = 58/98 (59%)
Frame = +1
Query: 340 EVLDETTVKKLVLNFEKKALRNREMRIKFPDQPDKFMDSEIDLHDALQDLSAVATVPDQY 519
EVLD K+L+L FE++ N E R+K PD P +F DSEI LH L +A PD +
Sbjct: 33 EVLDLRAAKRLLLAFERRLRDNLEARMKHPDDPARFADSEIALHAETDRLRLLAGAPDLF 92
Query: 520 PLLVELKCVNSLLELLSHDNTDVSTKVVQLLQEMTDVD 633
P LV L +SL LL+HDN D++ LL ++TD D
Sbjct: 93 PDLVPLGLASSLSSLLTHDNADLAAAAASLLADLTDSD 130
>03_01_0027 -
250837-250877,250972-252909,253733-253805,254476-254555,
255336-255595,255721-255785,256747-256839
Length = 849
Score = 33.5 bits (73), Expect = 0.18
Identities = 30/150 (20%), Positives = 61/150 (40%), Gaps = 5/150 (3%)
Frame = +1
Query: 220 TTKLKQEPVHLSKNMLKEPSITDKEREDILKFVATEVTEGEVLDETTVKKLVLNFEKKAL 399
T +L LSK +TD+ ++ K + E E+ E + +++ L
Sbjct: 481 TERLSTLESELSKAQDDLKKLTDEMATEVQKLSSAEARNSEIQSELEALDQKVKMQQEEL 540
Query: 400 RNREMRIK-----FPDQPDKFMDSEIDLHDALQDLSAVATVPDQYPLLVELKCVNSLLEL 564
++ +K F ++ DK + +E L L + +A + L +E++ N L
Sbjct: 541 EQKQKELKSFNLTFQEEQDKRLQAESAL---LSEGKELAQCQEVQRLTMEIQMANEKLNE 597
Query: 565 LSHDNTDVSTKVVQLLQEMTDVDILHESEE 654
L ++ V +L +E+ + + S E
Sbjct: 598 LKQTKVNLENAVSELKKEVESLTEQNRSSE 627
>10_08_0043 -
14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 31.9 bits (69), Expect = 0.56
Identities = 30/150 (20%), Positives = 61/150 (40%), Gaps = 5/150 (3%)
Frame = +1
Query: 220 TTKLKQEPVHLSKNMLKEPSITDKEREDILKFVATEVTEGEVLDETTVKKLVLNFEKKAL 399
T +L LSK +TD+ ++ K + E E+ E + +++ L
Sbjct: 260 TERLSTLESELSKAQDDLKKLTDEMATEVQKLSSAEARNSEIQSELEALDQKVKMQQEEL 319
Query: 400 RNREMRIK-----FPDQPDKFMDSEIDLHDALQDLSAVATVPDQYPLLVELKCVNSLLEL 564
++ +K F ++ DK M +E L ++L+ + L E++ N L
Sbjct: 320 EQKQKELKSFNLTFQEEQDKRMQAESALLSEGKELAQCQ--EEVQRLTKEIQMANEKLNE 377
Query: 565 LSHDNTDVSTKVVQLLQEMTDVDILHESEE 654
L ++ V +L +E+ ++ + S E
Sbjct: 378 LKQTKVNLENAVSELKKEVENLTEQNRSSE 407
>06_02_0305 + 14111798-14111843,14112645-14113111,14113299-14113667
Length = 293
Score = 31.5 bits (68), Expect = 0.74
Identities = 13/58 (22%), Positives = 33/58 (56%)
Frame = +1
Query: 217 RTTKLKQEPVHLSKNMLKEPSITDKEREDILKFVATEVTEGEVLDETTVKKLVLNFEK 390
R +L EP ++++ ++ ++RE +L F E+ + ++L E +++L++N +
Sbjct: 164 REAELSSEPFVEGFGIVQDITVYFEDREAVLDFYVFEIQDFDILIELPIEQLIINMPR 221
>08_02_0259 -
14974526-14974572,14974670-14974742,14974829-14974891,
14975030-14975097,14975172-14975295,14976434-14976493,
14976744-14976806,14976902-14977942,14978027-14978093,
14978188-14978303,14978454-14978540,14978749-14978838,
14979128-14979214,14979366-14979428,14979509-14979566,
14980174-14980231,14980349-14980416,14980508-14980587,
14981084-14981147,14981321-14981392,14981517-14981576,
14982344-14982398,14982487-14982520,14983845-14983931,
14984036-14984122,14984211-14984408,14984509-14984639,
14984739-14984838
Length = 1066
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Frame = +1
Query: 157 KRPNEDESDEEDQAKSAKIRRTTKLKQEPVHLSKNMLKEPSITDKE--REDILKFVATEV 330
KR E+ DE+D + + + + +QE L KNM + + ++ + K E+
Sbjct: 156 KRRTEEVDDEDDGNDTDEEQERIRDQQERAQLEKNMRERDAANTRKLMERQLSKEEQEEI 215
Query: 331 T-EGEVLDETTVKKLVLNFEKKALRNREMRIKFPDQPDKFMDSEIDLHD 474
T + +D+ L F ++A + K + D+ +D E D
Sbjct: 216 TRRSQAMDKNDTSDL-RKFSRQAYLQKRRDKKIDEIRDEILDHEYIFQD 263
>04_01_0129 +
1408408-1409055,1409107-1410013,1410145-1410294,
1419174-1419634,1419683-1419999,1420114-1420477
Length = 948
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 280 ITDKEREDILKFVATEVTEGEVLDETT--VKKLVLNFEKKALRNRE 411
++DK D+LK V + EG L ETT KK+V E + N E
Sbjct: 177 VSDKAFGDLLKLVKNILPEGNKLPETTYEAKKIVCPLELEEYENLE 222
>02_05_0156 + 26341904-26342801,26343469-26344148
Length = 525
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 124 ELLTFKPTPTPKRPNEDESDEEDQAKSA 207
E L F PT PK +E +DEED + SA
Sbjct: 218 EDLGFSPTTLPKAVSEASTDEEDSSSSA 245
>02_05_0702 -
31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/74 (22%), Positives = 38/74 (51%)
Frame = +1
Query: 97 RLKQKMDVAELLTFKPTPTPKRPNEDESDEEDQAKSAKIRRTTKLKQEPVHLSKNMLKEP 276
+L+++ L + T ++ + ESD E+ KS+++ T + +P L+ + +KE
Sbjct: 323 KLEKETSAKRDLEMEATYLKQKLEKCESDLENTRKSSELSFTPLVAADPCDLAGSPMKEM 382
Query: 277 SITDKEREDILKFV 318
+ +D ++ L V
Sbjct: 383 AFSDPANQNDLMIV 396
>08_02_0274 -
15192670-15192983,15193110-15193200,15193295-15193603,
15193859-15193944,15196034-15196088,15196689-15196757,
15197027-15197074,15198090-15198203,15198464-15198526,
15199236-15199427,15199519-15199643,15199723-15199779,
15200209-15200332,15200478-15200543,15200656-15200738,
15200916-15201036,15201663-15201773,15201841-15201936,
15202032-15202107,15202878-15203016,15203283-15203346,
15203454-15203527,15203845-15203923,15204473-15204547
Length = 876
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 133 TFKPTPTPKRPNEDESDEEDQAKSAKIRRTTKLKQEPVHLSKNMLK 270
T P P N S E+Q +A+++R KL QE L K +K
Sbjct: 107 TIPPKPNVPPENSVTSTGEEQLSAAEMQRRMKLLQEDSELQKLHMK 152
>06_03_1263 + 28828048-28828347
Length = 99
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 340 EVLDETTVKKLVLNFEKKALRNREMRIKFPD 432
E LD+ T + N +++ALR R +R+ D
Sbjct: 58 EYLDDETARSACRNLDRRALRGRALRVDLAD 88
>05_03_0634 + 16432679-16433076,16433358-16433610,16433993-16434291,
16434553-16434729,16435001-16435621,16435690-16435784,
16436000-16436088,16436185-16436250,16436475-16437026,
16437879-16437953,16438305-16438375,16438456-16438513,
16441506-16442048
Length = 1098
Score = 28.7 bits (61), Expect = 5.2
Identities = 37/182 (20%), Positives = 77/182 (42%), Gaps = 20/182 (10%)
Frame = +1
Query: 148 PTPKRPNEDESDEEDQAKSAK--IRRTTKLK--QEPVHLSKN-MLKEPSITD-----KER 297
PT K+ + E +++KS + I++ ++ K P H+S N L P + ++
Sbjct: 567 PTTKQRSVRTVTERNESKSGRPLIKKMSERKGNARPRHISSNAQLDSPGSANSSPFWRQV 626
Query: 298 EDILKFVATE-----VTEGEVLDETTVKKLVLNFEKKALRNREMRIKFPDQPDKFMDSEI 462
E ++ TE + + D++T + + E + + +++ QP S
Sbjct: 627 EPFFSYLTTEDIAYLSQQIHLSDDSTASRSIEGDESRKYKGS---LEYISQPSTPAGSNK 683
Query: 463 DLHDALQDLSAVATVPDQYPLLVELKCVNSLLELL-----SHDNTDVSTKVVQLLQEMTD 627
D H ALQ+ + + + + E C+ +L+ L + V +++Q L +
Sbjct: 684 DDHSALQNGYTLNEIDNDVGIAWETSCIEPILDQLVQGIGARGGASVGQRLMQALIDEDK 743
Query: 628 VD 633
VD
Sbjct: 744 VD 745
>04_04_0378 -
24822436-24822521,24822623-24822738,24823010-24823092,
24823772-24823918,24824004-24824051,24824153-24824353,
24824981-24825152,24825235-24825299,24825813-24825939,
24826436-24826528,24826608-24826696,24826804-24826950,
24827047-24827359,24827474-24828048
Length = 753
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +1
Query: 103 KQKMDVAELLTFKPTPTP---KRPNEDESDEEDQAKSAKIRRTTKLKQEPVHLSKNMLKE 273
++K D A+L K T K E + EE + K AK+ K + + + +L
Sbjct: 533 QEKEDKAKLEVPKATEEDVALKEMTEPTAREEKELKKAKVEHDRKEQLCDISQALAVLAS 592
Query: 274 PSITDKEREDILKFVATEV 330
S KER++ L V E+
Sbjct: 593 ASSVAKERQEFLNLVNKEI 611
>03_06_0562 + 34732027-34733121
Length = 364
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +1
Query: 157 KRPNEDESDEEDQAKSAKIRRTTKLKQEPVHLSKNMLKEPSITDKEREDILKFVATEVTE 336
KR E+ESD + S+ RRT ++ V + EP D L VA V E
Sbjct: 193 KRKAEEESDHPEAPASSAPRRTLPASEQHVDVDAAAASEPDQGGYLSTDQLDSVAAFVQE 252
Query: 337 GE 342
E
Sbjct: 253 HE 254
>01_06_1357 +
36632992-36633621,36634003-36635136,36635525-36636193,
36636250-36636343,36636378-36636490
Length = 879
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = +1
Query: 151 TPKRPNEDESDEEDQAKSAKIRRTTKLKQEPVHLSKNMLKEPSITDKEREDILKFVATEV 330
T K E +S+ E++ + RRT K KQE + E ED + V E
Sbjct: 361 TKKNTQESDSEGEEEPPKRRGRRTRKSKQEAEQEAAEKEDEVRAASPGTEDSKRAVQDED 420
Query: 331 TEGE 342
E E
Sbjct: 421 GEAE 424
>11_06_0289 - 21969248-21973516
Length = 1422
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/88 (21%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Frame = +1
Query: 166 NEDESDEEDQAKSAKIRRTTKLKQEPVHLSKN---------MLKEPSITDKEREDILKFV 318
N+++S+++D + + ++EP+HL ++ K S +E++ ++
Sbjct: 518 NDEDSNDDDDDEEEEEEDDDDDEEEPIHLHEDQYEQILREVFTKNASSKAQEQDKLVAEQ 577
Query: 319 ATEVTEGEVLDETTVKKLVLNFEKKALR 402
AT+ T LDE +K+++ ++ LR
Sbjct: 578 ATK-TAATTLDEERIKQMINEAKQDVLR 604
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 139 KPTPTPKRPNEDESDEEDQAKSAKIRRTTKLKQE 240
KP P P DE+D+++ A +A ++ K K++
Sbjct: 169 KPAPPPPAAAADEADDDEAAAAAASKKPQKKKKK 202
>02_02_0539 - 11315788-11315841,11316620-11316700,11316728-11317711
Length = 372
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/95 (20%), Positives = 43/95 (45%)
Frame = +1
Query: 139 KPTPTPKRPNEDESDEEDQAKSAKIRRTTKLKQEPVHLSKNMLKEPSITDKEREDILKFV 318
+P P + +ED+ D+ + + A+IR L + + +L P ++E E+ +
Sbjct: 81 EPDPIEEEQDEDDDDDAREERRARIRERALLLRRHEE-EQLLLLHPQHQEEEDEEASESE 139
Query: 319 ATEVTEGEVLDETTVKKLVLNFEKKALRNREMRIK 423
T ++ +V ++ V + + R +R+K
Sbjct: 140 ETAESDSDVGEQMAVVYMAVPLFIPKPRRDTIRLK 174
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,120,191
Number of Sequences: 37544
Number of extensions: 317001
Number of successful extensions: 1151
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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