Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0420
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   1.9  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       25   3.3  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          24   4.4  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   4.4  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   4.4  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   5.8  
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    24   5.8  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   5.8  
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       23   7.6  

>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 139 KPTPTPKRPNEDESDEEDQAKSAKIRRTTK 228
           KP    K  +ED+ DE D+A  A+ R  +K
Sbjct: 85  KPEKDRKPSDEDDDDEGDEANDARPRFGSK 114


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 127 LLTFKPTPTPKRPNEDESDEED 192
           L+T++      R NEDE DEED
Sbjct: 4   LVTWRLNDKCNRYNEDEEDEED 25


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +3

Query: 102 KTKNGCCR 125
           KTKNGCCR
Sbjct: 201 KTKNGCCR 208


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = +1

Query: 385  EKKALRNREMRIKFPDQPDKFMDSEIDLHDALQDLSAVATVPDQY 519
            EKKA   +E+  KF ++ D    + +       DLS    + +Q+
Sbjct: 1016 EKKAQYKKEVDEKFAEEVDNISQTVVSKAQFAMDLSQFGVLTNQH 1060


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 184 EEDQAKSAKIRRTTKLKQEPVHLSKNML 267
           EE+QAK  ++RRT + +++     K+ +
Sbjct: 803 EEEQAKLDQVRRTVQQEEQTAQAKKDAM 830


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +1

Query: 445 FMDSEIDLHDALQDLSAVATVPDQYPLLVELKCVNSLLELLS 570
           F+DSEI L    Q   + A  PD  P  V  +C  ++  +L+
Sbjct: 540 FIDSEIVLSALAQLKPSFAPGPDGIPSTVLKRCQTTVAPILA 581


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 474 CITGSKCCSNSXRPVSSAC 530
           C+T S+CCS S    +  C
Sbjct: 174 CLTSSECCSKSCLSFAYKC 192


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -1

Query: 345 YFSLCYFSGNKFKNIFSFFIS 283
           + ++CY+   K++ I +FFIS
Sbjct: 616 FMAICYWMKQKYQLIAAFFIS 636


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 127 LLTFKPTPTPKRPNEDESDEED 192
           L+T++      R N+DE DEED
Sbjct: 113 LVTWRLNDKCNRYNDDEEDEED 134


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,029
Number of Sequences: 2352
Number of extensions: 14156
Number of successful extensions: 30
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)