Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0420
(750 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 2.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 2.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 2.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 2.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 2.3
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 2.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 2.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 4.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 4.0
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 7.1
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 22 7.1
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.3
Identities = 27/105 (25%), Positives = 41/105 (39%)
Frame = +1
Query: 103 KQKMDVAELLTFKPTPTPKRPNEDESDEEDQAKSAKIRRTTKLKQEPVHLSKNMLKEPSI 282
K K+D+ +L KPT T D + ED + +K E + + K I
Sbjct: 127 KIKVDIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEI 186
Query: 283 TDKEREDILKFVATEVTEGEVLDETTVKKLVLNFEKKALRNREMR 417
T E +L V E +E E T KK ++ R+R +
Sbjct: 187 T--EHRTVLA-VNIEKSENET---KTCKKYAISSNSLRSRSRSFQ 225
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.3
Identities = 27/105 (25%), Positives = 41/105 (39%)
Frame = +1
Query: 103 KQKMDVAELLTFKPTPTPKRPNEDESDEEDQAKSAKIRRTTKLKQEPVHLSKNMLKEPSI 282
K K+D+ +L KPT T D + ED + +K E + + K I
Sbjct: 127 KIKVDIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEI 186
Query: 283 TDKEREDILKFVATEVTEGEVLDETTVKKLVLNFEKKALRNREMR 417
T E +L V E +E E T KK ++ R+R +
Sbjct: 187 T--EHRTVLA-VNIEKSENET---KTCKKYAISSNSLRSRSRSFQ 225
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.3
Identities = 27/105 (25%), Positives = 41/105 (39%)
Frame = +1
Query: 103 KQKMDVAELLTFKPTPTPKRPNEDESDEEDQAKSAKIRRTTKLKQEPVHLSKNMLKEPSI 282
K K+D+ +L KPT T D + ED + +K E + + K I
Sbjct: 127 KIKVDIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEI 186
Query: 283 TDKEREDILKFVATEVTEGEVLDETTVKKLVLNFEKKALRNREMR 417
T E +L V E +E E T KK ++ R+R +
Sbjct: 187 T--EHRTVLA-VNIEKSENET---KTCKKYAISSNSLRSRSRSFQ 225
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.3
Identities = 27/105 (25%), Positives = 41/105 (39%)
Frame = +1
Query: 103 KQKMDVAELLTFKPTPTPKRPNEDESDEEDQAKSAKIRRTTKLKQEPVHLSKNMLKEPSI 282
K K+D+ +L KPT T D + ED + +K E + + K I
Sbjct: 127 KIKVDIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEI 186
Query: 283 TDKEREDILKFVATEVTEGEVLDETTVKKLVLNFEKKALRNREMR 417
T E +L V E +E E T KK ++ R+R +
Sbjct: 187 T--EHRTVLA-VNIEKSENET---KTCKKYAISSNSLRSRSRSFQ 225
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.3
Identities = 27/105 (25%), Positives = 41/105 (39%)
Frame = +1
Query: 103 KQKMDVAELLTFKPTPTPKRPNEDESDEEDQAKSAKIRRTTKLKQEPVHLSKNMLKEPSI 282
K K+D+ +L KPT T D + ED + +K E + + K I
Sbjct: 127 KIKVDIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEI 186
Query: 283 TDKEREDILKFVATEVTEGEVLDETTVKKLVLNFEKKALRNREMR 417
T E +L V E +E E T KK ++ R+R +
Sbjct: 187 T--EHRTVLA-VNIEKSENET---KTCKKYAISSNSLRSRSRSFQ 225
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 23.4 bits (48), Expect = 2.3
Identities = 27/105 (25%), Positives = 41/105 (39%)
Frame = +1
Query: 103 KQKMDVAELLTFKPTPTPKRPNEDESDEEDQAKSAKIRRTTKLKQEPVHLSKNMLKEPSI 282
K K+D+ +L KPT T D + ED + +K E + + K I
Sbjct: 127 KIKVDIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEI 186
Query: 283 TDKEREDILKFVATEVTEGEVLDETTVKKLVLNFEKKALRNREMR 417
T E +L V E +E E T KK ++ R+R +
Sbjct: 187 T--EHRTVLA-VNIEKSENET---KTCKKYAISSNSLRSRSRSFQ 225
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.3
Identities = 27/105 (25%), Positives = 41/105 (39%)
Frame = +1
Query: 103 KQKMDVAELLTFKPTPTPKRPNEDESDEEDQAKSAKIRRTTKLKQEPVHLSKNMLKEPSI 282
K K+D+ +L KPT T D + ED + +K E + + K I
Sbjct: 127 KIKVDIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEI 186
Query: 283 TDKEREDILKFVATEVTEGEVLDETTVKKLVLNFEKKALRNREMR 417
T E +L V E +E E T KK ++ R+R +
Sbjct: 187 T--EHRTVLA-VNIEKSENET---KTCKKYAISSNSLRSRSRSFQ 225
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 4.0
Identities = 11/61 (18%), Positives = 28/61 (45%)
Frame = +1
Query: 157 KRPNEDESDEEDQAKSAKIRRTTKLKQEPVHLSKNMLKEPSITDKEREDILKFVATEVTE 336
+RP ++ + + A++ + R + + + + N P + EDI + +++E
Sbjct: 1645 QRPMKESQENQQNAETQRERYYATIHKVALQQAANTGGGPDKIPETAEDISPYATFQLSE 1704
Query: 337 G 339
G
Sbjct: 1705 G 1705
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 4.0
Identities = 11/61 (18%), Positives = 28/61 (45%)
Frame = +1
Query: 157 KRPNEDESDEEDQAKSAKIRRTTKLKQEPVHLSKNMLKEPSITDKEREDILKFVATEVTE 336
+RP ++ + + A++ + R + + + + N P + EDI + +++E
Sbjct: 1641 QRPMKESQENQQNAETQRERYYATIHKVALQQAANTGGGPDKIPETAEDISPYATFQLSE 1700
Query: 337 G 339
G
Sbjct: 1701 G 1701
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 572 MIILMFPPKLFNCY 613
M+ M PP + NCY
Sbjct: 101 MMFCMSPPMVINCY 114
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 572 MIILMFPPKLFNCY 613
M+ M PP + NCY
Sbjct: 67 MMFCMSPPMVINCY 80
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,308
Number of Sequences: 438
Number of extensions: 3608
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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