Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0419
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70855-1|AAB09161.1| 390|Caenorhabditis elegans Hypothetical pr... 48 5e-06
Z49130-6|CAA88971.1| 387|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z70287-1|CAA94302.3| 294|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z93778-3|CAB07846.1| 446|Caenorhabditis elegans Hypothetical pr... 29 2.7
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81041-11|CAJ90515.1| 713|Caenorhabditis elegans Hypothetical p... 29 4.7
Z81041-10|CAB02785.3| 743|Caenorhabditis elegans Hypothetical p... 29 4.7
U41039-2|AAX88821.1| 141|Caenorhabditis elegans Saposin-like pr... 29 4.7
U80026-2|AAY86280.1| 122|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z75713-4|CAB00050.1| 603|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z34799-4|CAD44130.2| 691|Caenorhabditis elegans Hypothetical pr... 28 8.1
>U70855-1|AAB09161.1| 390|Caenorhabditis elegans Hypothetical
protein K08F11.3 protein.
Length = 390
Score = 48.4 bits (110), Expect = 5e-06
Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Frame = +1
Query: 73 ELIKQVLEAPGVHVFGELLEMPNIKELESGPYATHLKTLNLFAYGTYKDYIE----NK-- 234
E ++ + P F L + +K L++ L LF GT KDY E N
Sbjct: 214 ECVRTAVVDPKSFSFDHLERLSAVKALKTSD-PLMFTALELFISGTLKDYKEFVAKNPKF 272
Query: 235 -SDYLELT-TVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLEDLIIEAIYADI 408
+++L++ T+ KK++ LT+ +LA ++ I L ++LDI LE+ +I+AI +
Sbjct: 273 VTEHLKVDETILLKKIRLLTLMSLAEEKNEISLDELAKQLDILADETLEEFVIDAIQVNA 332
Query: 409 IHGKLDQECKRVEV 450
I GK+++ + + V
Sbjct: 333 ISGKINEMARTLIV 346
>Z49130-6|CAA88971.1| 387|Caenorhabditis elegans Hypothetical
protein T06D8.8 protein.
Length = 387
Score = 31.1 bits (67), Expect = 0.87
Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 9/149 (6%)
Frame = +1
Query: 106 VHVFGELLEMPNIKELESGPYATHLKTLNLFAYGTYKDYIENKSDY------LELTTVQC 267
VH FGELL P +K LE + L F G + + D+ +
Sbjct: 219 VHNFGELLAHPILKSLEGTRERWIVDVLLAFNSGDLTRFFSLEGDWGGWDDLKKQKDFLT 278
Query: 268 KKLQHLTIATLATQEKCIPYSVLLEELDIK---NVRDLEDLIIEAIYADIIHGKLDQECK 438
K++ + + LA SV +E+ K ++E L+++A+ D+I G ++Q +
Sbjct: 279 AKIRLMAVMELAVSRPTKARSVSFKEIATKCQIPFDEVEFLVMKALSKDLIRGDINQVEQ 338
Query: 439 RVEVDVALGRXARLEDAASIADVLADWCN 525
V V R +A ++ W N
Sbjct: 339 VVYVTWVQPRVLDNPQIMQMATRISAWRN 367
>Z70287-1|CAA94302.3| 294|Caenorhabditis elegans Hypothetical
protein R09E10.1 protein.
Length = 294
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 175 HLKTLNLFAYGTYKDYIENKSDYLELTTVQCKKLQ 279
HLK + F YG Y Y++ K D L++ Q + Q
Sbjct: 209 HLKRVKKFLYGQYPKYVDMKRDLLKIVKQQKPEAQ 243
>Z93778-3|CAB07846.1| 446|Caenorhabditis elegans Hypothetical
protein C31H5.6 protein.
Length = 446
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 250 LTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLEDLIIEAIYADI-IHGKLD 426
L T C K T+ + T+E IP+ + +E + + ++DL +I++++ I KL
Sbjct: 298 LVTAPCFK----TLTPILTEENSIPWHWIPKETAFRLIGSVDDLCAPSIHSNLHIQKKLQ 353
Query: 427 QECKRVEVDVALG 465
+ VE+++ G
Sbjct: 354 ETGHYVELELVNG 366
>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical protein
C13F10.4 protein.
Length = 2076
Score = 29.1 bits (62), Expect = 3.5
Identities = 24/93 (25%), Positives = 35/93 (37%)
Frame = +1
Query: 301 ATQEKCIPYSVLLEELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGRXARL 480
A K + Y L E+ K L++ ++ D+I L C + V ARL
Sbjct: 845 ALTAKLLSYKTLCEQRGHK----LDNETLQRASFDLISSSLSNSCPMTRL-VGAEALARL 899
Query: 481 EDAASIADVLADWCNACEAVLNSVDQHIQRANH 579
A + +A C LNS I R+ H
Sbjct: 900 SQAVNSPPFVASIAQYCFDKLNSCKDEINRSGH 932
>Z81041-11|CAJ90515.1| 713|Caenorhabditis elegans Hypothetical
protein C27A7.3b protein.
Length = 713
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 277 VISCTGLWLILNSPICSQCS 218
+I+CTG WL N P+C + S
Sbjct: 627 LITCTGNWLSTNPPLCKKYS 646
>Z81041-10|CAB02785.3| 743|Caenorhabditis elegans Hypothetical
protein C27A7.3a protein.
Length = 743
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 277 VISCTGLWLILNSPICSQCS 218
+I+CTG WL N P+C + S
Sbjct: 657 LITCTGNWLSTNPPLCKKYS 676
>U41039-2|AAX88821.1| 141|Caenorhabditis elegans Saposin-like
protein family protein22 protein.
Length = 141
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 202 YGTYKDYIENKSDYLELTTVQCKKLQH 282
YG D+I+ K D++E+ + C+ L H
Sbjct: 62 YGVNYDFIQLKKDFIEMIRLDCEALFH 88
>U80026-2|AAY86280.1| 122|Caenorhabditis elegans Hypothetical
protein EGAP9.4 protein.
Length = 122
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 514 DWCNACEAVLNSVDQHIQRANHQKQXAIRHQQGIEQKIL 630
+WC C A NS+D+ Q + Q + +Q I + ++
Sbjct: 69 EWCPLCGAEFNSIDECSQHQTAEHQDQDKKKQAINKLLV 107
>Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical
protein T01G5.7 protein.
Length = 332
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +1
Query: 121 ELLEMPNI-KEL--ESGPYATHLKTLNLFAYGTYKDYIENKSDYLELTTVQCKKL 276
+L+ M N+ +EL ++ Y + L++ + Y TY + + KSD EL Q KKL
Sbjct: 123 QLIMMANLGEELGNDAKRYRSELESAHEELYQTYTIFDKEKSDLCELIEEQTKKL 177
>Z75713-4|CAB00050.1| 603|Caenorhabditis elegans Hypothetical
protein T01G9.3 protein.
Length = 603
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 231 QIGLFRINHSPVQEITASDHCNT 299
Q+ + ++H+ +QEITA CNT
Sbjct: 257 QLSVLDLSHNSIQEITACAFCNT 279
>Z34799-4|CAD44130.2| 691|Caenorhabditis elegans Hypothetical
protein F34D10.7 protein.
Length = 691
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +1
Query: 277 QHLTIATLATQEKCIPYSVLLEELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDV 456
Q L + ++ ++ + ++ +L ++DLE+ I + I+ I GKL++ D+
Sbjct: 182 QRLNVRSM--KDNAVMNQLISGQLSRPLLQDLEEDIYDWIHTGNI-GKLEELVLTGYADL 238
Query: 457 ALGRXARLEDAASIA--DVLADWCNACEAVLNSVDQHIQRA 573
LGR ++DA SI +VL + +++ +V+ RA
Sbjct: 239 LLGRNHEVDDADSIGFLEVLPQYQAKIQSIHKAVETGNLRA 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,830,245
Number of Sequences: 27780
Number of extensions: 316965
Number of successful extensions: 777
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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