Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0416
(800 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B4386 Cluster: PREDICTED: hypothetical protein;... 39 0.13
UniRef50_UPI00015B470E Cluster: PREDICTED: hypothetical protein;... 39 0.17
UniRef50_UPI00015B452C Cluster: PREDICTED: hypothetical protein,... 38 0.29
UniRef50_UPI00015B472B Cluster: PREDICTED: hypothetical protein;... 37 0.51
UniRef50_Q24310 Cluster: Polyprotein; n=1; Drosophila melanogast... 37 0.51
UniRef50_UPI00015B47E1 Cluster: PREDICTED: hypothetical protein;... 36 1.2
UniRef50_UPI00015B455C Cluster: PREDICTED: hypothetical protein;... 36 1.6
UniRef50_UPI00015B440C Cluster: PREDICTED: hypothetical protein;... 36 1.6
UniRef50_UPI00015B493E Cluster: PREDICTED: hypothetical protein;... 35 2.1
UniRef50_Q4PAV6 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_Q10RT2 Cluster: Retrotransposon protein, putative, uncl... 35 2.7
UniRef50_Q2QPU3 Cluster: Retrotransposon protein, putative, uncl... 34 3.6
UniRef50_UPI00015B47F9 Cluster: PREDICTED: hypothetical protein;... 34 4.8
UniRef50_Q0D5X1 Cluster: Os07g0528900 protein; n=3; Oryza sativa... 34 4.8
UniRef50_Q10KN1 Cluster: Retrotransposon protein, putative, uncl... 33 6.3
UniRef50_Q0DBF1 Cluster: Os06g0570000 protein; n=1; Oryza sativa... 33 6.3
UniRef50_Q0DAQ7 Cluster: Os06g0638300 protein; n=6; Oryza sativa... 33 6.3
>UniRef50_UPI00015B4386 Cluster: PREDICTED: hypothetical protein;
n=2; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 997
Score = 39.1 bits (87), Expect = 0.13
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +3
Query: 423 RELNRNTLRGXTIPLPIICRFK*NQLAGGYYFSSFDMAAGFH 548
RELN+ T+R PLP I +QL YFS FD+A+GFH
Sbjct: 179 RELNKKTIR-HAYPLPNIADIM-DQLGDATYFSIFDLASGFH 218
>UniRef50_UPI00015B470E Cluster: PREDICTED: hypothetical protein;
n=3; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 716
Score = 38.7 bits (86), Expect = 0.17
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +3
Query: 423 RELNRNTLRGXTIPLPIICRFK*NQLAGGYYFSSFDMAAGF 545
RELN+ T+R PLP I +QL G YFS FD+A+GF
Sbjct: 109 RELNKKTIRD-AYPLPNIADIM-DQLGGATYFSIFDLASGF 147
>UniRef50_UPI00015B452C Cluster: PREDICTED: hypothetical protein,
partial; n=1; Nasonia vitripennis|Rep: PREDICTED:
hypothetical protein, partial - Nasonia vitripennis
Length = 2320
Score = 37.9 bits (84), Expect = 0.29
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +3
Query: 423 RELNRNTLRGXTIPLPIICRFK*NQLAGGYYFSSFDMAAGF 545
RE+N+ T+R PLP I +QL G YFS FD+A+GF
Sbjct: 82 REINKKTIRD-AYPLPNIADIM-DQLGGATYFSIFDLASGF 120
>UniRef50_UPI00015B472B Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 2069
Score = 37.1 bits (82), Expect = 0.51
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +3
Query: 423 RELNRNTLRGXTIPLPIICRFK*NQLAGGYYFSSFDMAAGF 545
RE+N+ T+R PLP + +QL G YFS FD+A+GF
Sbjct: 539 REINKKTIRD-AYPLPNLADIM-DQLGGATYFSIFDLASGF 577
>UniRef50_Q24310 Cluster: Polyprotein; n=1; Drosophila
melanogaster|Rep: Polyprotein - Drosophila melanogaster
(Fruit fly)
Length = 1053
Score = 37.1 bits (82), Expect = 0.51
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +3
Query: 423 RELNRNTLRGXTIPLPIICRFK*NQLAGGYYFSSFDMAAGFHSEFPI 563
RELN NT+ PLP+I + +L G YF+ DMA+GFH + PI
Sbjct: 514 RELNSNTI-SDKYPLPLISD-QIARLRGANYFTCLDMASGFH-QIPI 557
>UniRef50_UPI00015B47E1 Cluster: PREDICTED: hypothetical protein;
n=2; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1773
Score = 35.9 bits (79), Expect = 1.2
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +3
Query: 423 RELNRNTLRGXTIPLPIICRFK*NQLAGGYYFSSFDMAAGF 545
RELN+ T+R PLP I +QL YFS FD+A+GF
Sbjct: 325 RELNKKTIRD-AYPLPNIADIM-DQLGDATYFSIFDLASGF 363
>UniRef50_UPI00015B455C Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 3473
Score = 35.5 bits (78), Expect = 1.6
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +3
Query: 426 ELNRNTLRGXTIPLPIICRFK*NQLAGGYYFSSFDMAAGF 545
E+N+ T+R PLP I +QL G YFS FD+A+GF
Sbjct: 826 EINKKTIRD-AYPLPNISDIM-DQLGGATYFSIFDLASGF 863
>UniRef50_UPI00015B440C Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1818
Score = 35.5 bits (78), Expect = 1.6
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +3
Query: 423 RELNRNTLRGXTIPLPIICRFK*NQLAGGYYFSSFDMAAGF 545
RE+N+ T+R PLP I QL G YFS F++A+GF
Sbjct: 777 REINKKTIRD-AYPLPNIADIM-EQLGGATYFSIFNLASGF 815
>UniRef50_UPI00015B493E Cluster: PREDICTED: hypothetical protein;
n=3; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 620
Score = 35.1 bits (77), Expect = 2.1
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +3
Query: 423 RELNRNTLRGXTIPLPIICRFK*NQLAGGYYFSSFDMAAGF 545
RELN+ T R PLP I +Q+ G YFS FD+++GF
Sbjct: 435 RELNKKTTRD-AYPLPNIADIM-DQVGGATYFSIFDLSSGF 473
>UniRef50_Q4PAV6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1021
Score = 35.1 bits (77), Expect = 2.1
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = -2
Query: 778 VSTXVRPYHLDQT-WVQVKFRKVQLKAPNSMHP--SG*TETMPITEDRKWHGPSTPYMPS 608
V ++P L Q W+Q ++ Q K P+S++P S TET+P+T R +T Y P+
Sbjct: 64 VQATMQPLGLQQQHWLQ---QQQQFKYPHSLNPFDSAATETVPLTHTRSDSERATAYRPT 120
Query: 607 RVLRKGS 587
++GS
Sbjct: 121 TPNKRGS 127
>UniRef50_Q10RT2 Cluster: Retrotransposon protein, putative,
unclassified, expressed; n=6; Oryza sativa|Rep:
Retrotransposon protein, putative, unclassified,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 1920
Score = 34.7 bits (76), Expect = 2.7
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +3
Query: 423 RELNRNTLRGXTIPLPIICRFK*NQLAGGYYFSSFDMAAGFH 548
+ LN T++G PLP+I ++L+G YFS D+ AG+H
Sbjct: 132 KHLNAITIKGK-YPLPVIDELL-DELSGAKYFSKLDLRAGYH 171
>UniRef50_Q2QPU3 Cluster: Retrotransposon protein, putative,
unclassified; n=4; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
unclassified - Oryza sativa subsp. japonica (Rice)
Length = 1269
Score = 34.3 bits (75), Expect = 3.6
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +3
Query: 423 RELNRNTLRGXTIPLPIICRFK*NQLAGGYYFSSFDMAAGFH 548
R LN T++ PLPII ++LAG F+SFD+ AG+H
Sbjct: 514 RHLNAITVKNR-YPLPIIDELL-DELAGSCLFTSFDLRAGYH 553
>UniRef50_UPI00015B47F9 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 681
Score = 33.9 bits (74), Expect = 4.8
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 423 RELNRNTLRGXTIPLPIICRFK*NQLAGGYYFSSFDMAAGFH 548
R+LN T++ PLP I Q+ YFS FD+A GFH
Sbjct: 114 RKLNAKTIKD-AYPLPNILEIL-EQIGSAQYFSVFDLAMGFH 153
>UniRef50_Q0D5X1 Cluster: Os07g0528900 protein; n=3; Oryza
sativa|Rep: Os07g0528900 protein - Oryza sativa subsp.
japonica (Rice)
Length = 1790
Score = 33.9 bits (74), Expect = 4.8
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +3
Query: 423 RELNRNTLRGXTIPLPIICRFK*NQLAGGYYFSSFDMAAGFH 548
R+LN T +G T P+P+I ++ AG +FS D+ AG+H
Sbjct: 624 RQLNSITQKG-TYPMPVIDELL-DESAGAKFFSKLDLRAGYH 663
>UniRef50_Q10KN1 Cluster: Retrotransposon protein, putative,
unclassified; n=2; Oryza sativa|Rep: Retrotransposon
protein, putative, unclassified - Oryza sativa subsp.
japonica (Rice)
Length = 896
Score = 33.5 bits (73), Expect = 6.3
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 423 RELNRNTLRGXTIPLPIICRFK*NQLAGGYYFSSFDMAAGFH 548
R+LN T++ P+P++ ++LAG YFS D+ AG+H
Sbjct: 601 RKLNSVTVKSK-FPMPVVDELL-DELAGTQYFSKLDLRAGYH 640
>UniRef50_Q0DBF1 Cluster: Os06g0570000 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os06g0570000 protein -
Oryza sativa subsp. japonica (Rice)
Length = 1186
Score = 33.5 bits (73), Expect = 6.3
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +3
Query: 423 RELNRNTLRGXTIPLPIICRFK*NQLAGGYYFSSFDMAAGFH 548
R LN T++ PLPI+ N+LAG +FS D+ +G+H
Sbjct: 408 RRLNSLTIKNK-FPLPIVDELL-NELAGTKFFSKLDLRSGYH 447
>UniRef50_Q0DAQ7 Cluster: Os06g0638300 protein; n=6; Oryza
sativa|Rep: Os06g0638300 protein - Oryza sativa subsp.
japonica (Rice)
Length = 1254
Score = 33.5 bits (73), Expect = 6.3
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 423 RELNRNTLRGXTIPLPIICRFK*NQLAGGYYFSSFDMAAGFH 548
R+LN NT++ P+P+I ++L G YFS D+ +G+H
Sbjct: 445 RQLNSNTIKNK-YPIPVIEDLL-DELHGSKYFSKIDLRSGYH 484
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,216,558
Number of Sequences: 1657284
Number of extensions: 12233006
Number of successful extensions: 20945
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20942
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68731504465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -