Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0416
         (800 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ096628-1|AAZ74794.1| 1835|Homo sapiens zipzap protein protein.       31   3.7  
BX537879-1|CAD97878.1| 1044|Homo sapiens hypothetical protein pr...    31   3.7  
BC090062-1|AAH90062.1|  860|Homo sapiens ARID2 protein protein.        31   3.7  
AL832200-1|CAD91164.1| 1686|Homo sapiens hypothetical protein pr...    31   3.7  
AK127872-1|BAC87171.1|  952|Homo sapiens protein ( Homo sapiens ...    31   3.7  
AK027718-1|BAB55320.1|  840|Homo sapiens protein ( Homo sapiens ...    31   3.7  
AB046777-1|BAB13383.1|  806|Homo sapiens KIAA1557 protein protein.     31   3.7  

>DQ096628-1|AAZ74794.1| 1835|Homo sapiens zipzap protein protein.
          Length = 1835

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 20/66 (30%), Positives = 35/66 (53%)
 Frame = -2

Query: 721  RKVQLKAPNSMHPSG*TETMPITEDRKWHGPSTPYMPSRVLRKGSLFNXTL*EMGNSE*K 542
            + VQL  P++M PSG  +T+PI+  +   GP     P+ + +  S    T+  + N+   
Sbjct: 1125 QNVQL-VPSAMPPSGGVQTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFA 1183

Query: 541  PAAISK 524
            PA +S+
Sbjct: 1184 PATVSQ 1189


>BX537879-1|CAD97878.1| 1044|Homo sapiens hypothetical protein
           protein.
          Length = 1044

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 20/66 (30%), Positives = 35/66 (53%)
 Frame = -2

Query: 721 RKVQLKAPNSMHPSG*TETMPITEDRKWHGPSTPYMPSRVLRKGSLFNXTL*EMGNSE*K 542
           + VQL  P++M PSG  +T+PI+  +   GP     P+ + +  S    T+  + N+   
Sbjct: 334 QNVQL-VPSAMPPSGGVQTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFA 392

Query: 541 PAAISK 524
           PA +S+
Sbjct: 393 PATVSQ 398


>BC090062-1|AAH90062.1|  860|Homo sapiens ARID2 protein protein.
          Length = 860

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 20/66 (30%), Positives = 35/66 (53%)
 Frame = -2

Query: 721 RKVQLKAPNSMHPSG*TETMPITEDRKWHGPSTPYMPSRVLRKGSLFNXTL*EMGNSE*K 542
           + VQL  P++M PSG  +T+PI+  +   GP     P+ + +  S    T+  + N+   
Sbjct: 150 QNVQL-VPSAMPPSGGVQTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFA 208

Query: 541 PAAISK 524
           PA +S+
Sbjct: 209 PATVSQ 214


>AL832200-1|CAD91164.1| 1686|Homo sapiens hypothetical protein
            protein.
          Length = 1686

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 20/66 (30%), Positives = 35/66 (53%)
 Frame = -2

Query: 721  RKVQLKAPNSMHPSG*TETMPITEDRKWHGPSTPYMPSRVLRKGSLFNXTL*EMGNSE*K 542
            + VQL  P++M PSG  +T+PI+  +   GP     P+ + +  S    T+  + N+   
Sbjct: 976  QNVQL-VPSAMPPSGGVQTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFA 1034

Query: 541  PAAISK 524
            PA +S+
Sbjct: 1035 PATVSQ 1040


>AK127872-1|BAC87171.1|  952|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45976 fis, clone PLACE7018512. ).
          Length = 952

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 20/66 (30%), Positives = 35/66 (53%)
 Frame = -2

Query: 721 RKVQLKAPNSMHPSG*TETMPITEDRKWHGPSTPYMPSRVLRKGSLFNXTL*EMGNSE*K 542
           + VQL  P++M PSG  +T+PI+  +   GP     P+ + +  S    T+  + N+   
Sbjct: 242 QNVQL-VPSAMPPSGGVQTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFA 300

Query: 541 PAAISK 524
           PA +S+
Sbjct: 301 PATVSQ 306


>AK027718-1|BAB55320.1|  840|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14812 fis, clone NT2RP4002081, weakly similar to
           TRANSCRIPTION INITIATION FACTOR IIA ALPHA AND BETA
           CHAINS. ).
          Length = 840

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 20/66 (30%), Positives = 35/66 (53%)
 Frame = -2

Query: 721 RKVQLKAPNSMHPSG*TETMPITEDRKWHGPSTPYMPSRVLRKGSLFNXTL*EMGNSE*K 542
           + VQL  P++M PSG  +T+PI+  +   GP     P+ + +  S    T+  + N+   
Sbjct: 138 QNVQL-VPSAMPPSGGVQTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFA 196

Query: 541 PAAISK 524
           PA +S+
Sbjct: 197 PATVSQ 202


>AB046777-1|BAB13383.1|  806|Homo sapiens KIAA1557 protein protein.
          Length = 806

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 20/66 (30%), Positives = 35/66 (53%)
 Frame = -2

Query: 721 RKVQLKAPNSMHPSG*TETMPITEDRKWHGPSTPYMPSRVLRKGSLFNXTL*EMGNSE*K 542
           + VQL  P++M PSG  +T+PI+  +   GP     P+ + +  S    T+  + N+   
Sbjct: 96  QNVQL-VPSAMPPSGGVQTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFA 154

Query: 541 PAAISK 524
           PA +S+
Sbjct: 155 PATVSQ 160


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,560,858
Number of Sequences: 237096
Number of extensions: 2021502
Number of successful extensions: 7003
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7000
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)