Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0413
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       26   1.1  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   3.3  
AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.         23   7.5  

>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 8/27 (29%), Positives = 19/27 (70%)
 Frame = +1

Query: 157 FPNESEKNGKCSSAEYKLESDVVKVKN 237
           + ++ E++   ++AE+ L+ DV++V N
Sbjct: 170 YDDDDEEDAAAAAAEFPLQKDVIRVTN 196


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +3

Query: 219  RGESQERAYHRRRQEVYRKDGQAHRRCQ*SRKANSHF 329
            R  S      RRR+E+ R   Q  RR + S+    HF
Sbjct: 1181 RAVSSAEELERRRREMERTRRQRQRRARDSQAITIHF 1217


>AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.
          Length = 226

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 319 TVTFKFGEISRDGSVQILATDYNNYAIAYNCKYDD 423
           T+TFK G+         LATDY    +  +  + D
Sbjct: 53  TLTFKDGQTYTQAIAFTLATDYGTVRLMSSYNFTD 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.131    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,757
Number of Sequences: 2352
Number of extensions: 7930
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)