Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0411
         (534 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   9.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   9.0  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   9.0  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 10  LPARAIKKNHSITHTMNF 63
           L A +I +  +ITH MNF
Sbjct: 137 LVALSIDRYDAITHPMNF 154


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -1

Query: 528 FFFFIYNSLWPCL 490
           +F +++ S+W CL
Sbjct: 296 YFIYMFVSVWKCL 308


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -1

Query: 528 FFFFIYNSLWPCL 490
           +F +++ S+W CL
Sbjct: 296 YFIYMFVSVWKCL 308


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -1

Query: 528 FFFFIYNSLWPCL 490
           +F +++ S+W CL
Sbjct: 296 YFIYMFVSVWKCL 308


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -1

Query: 528 FFFFIYNSLWPCL 490
           +F +++ S+W CL
Sbjct: 296 YFIYMFVSVWKCL 308


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 327 LKVETETVDFNLIDFFLSGGNRRTSVEGG 241
           L++  E V+FN   FF        S+ GG
Sbjct: 613 LQIANEQVEFNAAGFFAINYTLVFSILGG 641


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 327 LKVETETVDFNLIDFFLSGGNRRTSVEGG 241
           L++  E V+FN   FF        S+ GG
Sbjct: 338 LQIANEQVEFNAAGFFAINYTLVFSILGG 366


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 254 PWRAGHVGVEPIASNRST 201
           PW A H+G   +AS   T
Sbjct: 141 PWFAEHMGQIKVASGNHT 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,599
Number of Sequences: 336
Number of extensions: 2189
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)