Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0411
         (534 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    26   0.91 
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   2.1  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    24   2.8  
AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA fact...    24   2.8  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    24   3.7  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   3.7  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   4.9  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   6.4  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   6.4  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    23   8.5  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 25.8 bits (54), Expect = 0.91
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = +2

Query: 209 DWRQSVRLRH--APPSTEVRRFPPDK 280
           +W  S+R+    A PS EVR+ PP+K
Sbjct: 445 EWDPSIRIEPPAAIPSQEVRKRPPEK 470


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 298 EVYCFCLNLQAIPSRWKCQGISLQFP 375
           +VY  CL+    P  WK Q + L  P
Sbjct: 442 KVYQRCLDTGVFPDNWKKQRLVLSIP 467


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +1

Query: 298 EVYCFCLNLQAIPSRWKCQGISLQFPNDFVVFFIKLSVMM*D 423
           E++C    L  +PS WK   IS    N  +  F KL+ ++ D
Sbjct: 236 EIFCLTYQLDVLPSVWKY--ISTPKFNRLMKLFDKLTNLILD 275


>AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA factor
           protein.
          Length = 77

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 270 GNRRTSVEGGACRSRTDCLQSLNNQ 196
           GNRR+ V    C++ T  L   NNQ
Sbjct: 53  GNRRSGVTCANCQTTTTTLWRRNNQ 77


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 274 RRKSPDFRGGRGMSESNRLPPIAQQPASKPRMRQSS 167
           R  SP F     +   NR+PP+     S+ R R SS
Sbjct: 48  RNGSPKF--APAVQSKNRMPPVPPPKHSQRRRRSSS 81


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 301 VYCFCLNLQAIPSRWKCQGISL 366
           VY  CLN    P +WK Q + L
Sbjct: 477 VYQDCLNTGTFPQQWKRQRLVL 498


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 301 VYCFCLNLQAIPSRWKCQGISL 366
           +Y  CLN  + P++WK Q + L
Sbjct: 515 LYQDCLNRASFPAQWKRQRLVL 536


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 161 RQRGESEAFSAGHISPV 111
           RQR  S A S G +SP+
Sbjct: 260 RQRASSNASSCGRLSPI 276


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 298 EVYCFCLNLQAIPSRWKCQGISL 366
           +VY  CL+    P +WK Q + L
Sbjct: 458 QVYQECLDRSCFPEQWKKQRLVL 480


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 251 WRAGHVGVEPIASNRSTTSIQTSHE 177
           W+ GH G E    +RS   I+   E
Sbjct: 334 WKLGHKGFECTGQDRSKLCIKCGQE 358


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,236
Number of Sequences: 2352
Number of extensions: 10375
Number of successful extensions: 73
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)