Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0411
(534 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003634-1|AAO39638.1| 1517|Drosophila melanogaster AT18914p pro... 33 0.32
AY118574-1|AAM49943.1| 610|Drosophila melanogaster LD43063p pro... 33 0.32
AY069080-1|AAL39225.1| 1396|Drosophila melanogaster GH09618p pro... 33 0.32
AE013599-2497|AAS64822.1| 1540|Drosophila melanogaster CG33130-P... 33 0.32
AE013599-2496|AAO41362.1| 1517|Drosophila melanogaster CG33130-P... 33 0.32
AE013599-2495|AAS64821.1| 1630|Drosophila melanogaster CG33130-P... 33 0.32
BT025217-1|ABF17908.1| 558|Drosophila melanogaster FI01024p pro... 29 5.3
AY070596-1|AAL48067.1| 461|Drosophila melanogaster RE69756p pro... 29 5.3
AJ245859-1|CAB64938.1| 558|Drosophila melanogaster putative DNA... 29 5.3
AE014134-1521|AAF52681.2| 558|Drosophila melanogaster CG9233-PA... 29 5.3
U18298-1|AAA57340.1| 875|Drosophila melanogaster CDC27Dm protein. 28 7.0
BT021947-1|AAX51652.1| 900|Drosophila melanogaster LD12661p pro... 28 7.0
AE014298-625|AAX52475.1| 1095|Drosophila melanogaster CG3620-PD,... 28 7.0
AE014298-624|AAX52474.1| 1095|Drosophila melanogaster CG3620-PC,... 28 7.0
AE014296-1216|AAF50592.1| 900|Drosophila melanogaster CG8610-PA... 28 7.0
>BT003634-1|AAO39638.1| 1517|Drosophila melanogaster AT18914p protein.
Length = 1517
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -3
Query: 229 SNRLPPIAQQPASKPRMRQSS*KGKGAKVKRLVRGTSLPSL 107
SN+ P QQP S R++QSS + AK K LV G +L
Sbjct: 1188 SNQSPQQTQQPMSPTRLQQSSNNAEAAKNKALVIGADSTNL 1228
>AY118574-1|AAM49943.1| 610|Drosophila melanogaster LD43063p
protein.
Length = 610
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -3
Query: 229 SNRLPPIAQQPASKPRMRQSS*KGKGAKVKRLVRGTSLPSL 107
SN+ P QQP S R++QSS + AK K LV G +L
Sbjct: 258 SNQSPQQTQQPMSPTRLQQSSNNAEAAKNKALVIGADSTNL 298
>AY069080-1|AAL39225.1| 1396|Drosophila melanogaster GH09618p protein.
Length = 1396
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -3
Query: 229 SNRLPPIAQQPASKPRMRQSS*KGKGAKVKRLVRGTSLPSL 107
SN+ P QQP S R++QSS + AK K LV G +L
Sbjct: 982 SNQSPQQTQQPMSPTRLQQSSNNAEAAKNKALVIGADSTNL 1022
>AE013599-2497|AAS64822.1| 1540|Drosophila melanogaster CG33130-PB,
isoform B protein.
Length = 1540
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -3
Query: 229 SNRLPPIAQQPASKPRMRQSS*KGKGAKVKRLVRGTSLPSL 107
SN+ P QQP S R++QSS + AK K LV G +L
Sbjct: 1188 SNQSPQQTQQPMSPTRLQQSSNNAEAAKNKALVIGADSTNL 1228
>AE013599-2496|AAO41362.1| 1517|Drosophila melanogaster CG33130-PA,
isoform A protein.
Length = 1517
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -3
Query: 229 SNRLPPIAQQPASKPRMRQSS*KGKGAKVKRLVRGTSLPSL 107
SN+ P QQP S R++QSS + AK K LV G +L
Sbjct: 1188 SNQSPQQTQQPMSPTRLQQSSNNAEAAKNKALVIGADSTNL 1228
>AE013599-2495|AAS64821.1| 1630|Drosophila melanogaster CG33130-PC,
isoform C protein.
Length = 1630
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -3
Query: 229 SNRLPPIAQQPASKPRMRQSS*KGKGAKVKRLVRGTSLPSL 107
SN+ P QQP S R++QSS + AK K LV G +L
Sbjct: 1216 SNQSPQQTQQPMSPTRLQQSSNNAEAAKNKALVIGADSTNL 1256
>BT025217-1|ABF17908.1| 558|Drosophila melanogaster FI01024p
protein.
Length = 558
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -2
Query: 239 HVGVEPIASNRSTTSIQTSHETELMKRQRGESEAFSAG 126
H GV+P + S QT+ E R GE +AF G
Sbjct: 316 HSGVKPFVCQQCPRSFQTAVEMMRHTRSHGEVKAFQCG 353
>AY070596-1|AAL48067.1| 461|Drosophila melanogaster RE69756p
protein.
Length = 461
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -2
Query: 239 HVGVEPIASNRSTTSIQTSHETELMKRQRGESEAFSAG 126
H GV+P + S QT+ E R GE +AF G
Sbjct: 219 HSGVKPFVCQQCPRSFQTAVEMMRHTRSHGEVKAFQCG 256
>AJ245859-1|CAB64938.1| 558|Drosophila melanogaster putative DNA
binding protein protein.
Length = 558
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -2
Query: 239 HVGVEPIASNRSTTSIQTSHETELMKRQRGESEAFSAG 126
H GV+P + S QT+ E R GE +AF G
Sbjct: 316 HSGVKPFVCQQCPRSFQTAVEMMRHTRSHGEVKAFQCG 353
>AE014134-1521|AAF52681.2| 558|Drosophila melanogaster CG9233-PA
protein.
Length = 558
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -2
Query: 239 HVGVEPIASNRSTTSIQTSHETELMKRQRGESEAFSAG 126
H GV+P + S QT+ E R GE +AF G
Sbjct: 316 HSGVKPFVCQQCPRSFQTAVEMMRHTRSHGEVKAFQCG 353
>U18298-1|AAA57340.1| 875|Drosophila melanogaster CDC27Dm protein.
Length = 875
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -3
Query: 322 G*DRNSRLQPDRLFFVRRKSPDFRGGRGMSESNRLPPIAQ---QPASKPRMRQS 170
G + N + P+ VRR S F + E+N+ P IA QP S PR +S
Sbjct: 409 GNNGNMNVPPNPNAAVRRSSRLFSNSYSVKENNKSPNIANKFVQPRSPPRKAKS 462
>BT021947-1|AAX51652.1| 900|Drosophila melanogaster LD12661p
protein.
Length = 900
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -3
Query: 322 G*DRNSRLQPDRLFFVRRKSPDFRGGRGMSESNRLPPIAQ---QPASKPRMRQS 170
G + N + P+ VRR S F + E+N+ P IA QP S PR +S
Sbjct: 409 GNNGNMNVPPNPNAAVRRSSRLFSNSYSVKENNKSPNIANKFVQPRSPPRKAKS 462
>AE014298-625|AAX52475.1| 1095|Drosophila melanogaster CG3620-PD,
isoform D protein.
Length = 1095
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 361 ICPDISTAKEWLEG 320
ICPD +TAK WL+G
Sbjct: 121 ICPDAATAKIWLDG 134
>AE014298-624|AAX52474.1| 1095|Drosophila melanogaster CG3620-PC,
isoform C protein.
Length = 1095
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 361 ICPDISTAKEWLEG 320
ICPD +TAK WL+G
Sbjct: 121 ICPDAATAKIWLDG 134
>AE014296-1216|AAF50592.1| 900|Drosophila melanogaster CG8610-PA
protein.
Length = 900
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -3
Query: 322 G*DRNSRLQPDRLFFVRRKSPDFRGGRGMSESNRLPPIAQ---QPASKPRMRQS 170
G + N + P+ VRR S F + E+N+ P IA QP S PR +S
Sbjct: 409 GNNGNMNVPPNPNAAVRRSSRLFSNSYSVKENNKSPNIANKFVQPRSPPRKAKS 462
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,686,817
Number of Sequences: 53049
Number of extensions: 460872
Number of successful extensions: 1137
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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