Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0410
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.79 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.79 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.79 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.79 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   4.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.2  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   7.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   9.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = -1

Query: 322 FAHNFLIIHVSFGCDFATQKHHTGFSYGFTCNFCVRILIQVRV 194
           FA  F  I   F C    Q    GFSY F  N  + + I + +
Sbjct: 386 FASYFAYIFGKFACKIMIQ----GFSYAFPVNLTIPVSISLLI 424


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = -1

Query: 322 FAHNFLIIHVSFGCDFATQKHHTGFSYGFTCNFCVRILIQVRV 194
           FA  F  I   F C    Q    GFSY F  N  + + I + +
Sbjct: 386 FASYFAYIFGKFACKIMIQ----GFSYAFPVNLTIPVSISLLI 424


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = -1

Query: 322 FAHNFLIIHVSFGCDFATQKHHTGFSYGFTCNFCVRILIQVRV 194
           FA  F  I   F C    Q    GFSY F  N  + + I + +
Sbjct: 386 FASYFAYIFGKFACKIMIQ----GFSYAFPVNLTIPVSISLLI 424


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = -1

Query: 322 FAHNFLIIHVSFGCDFATQKHHTGFSYGFTCNFCVRILIQVRV 194
           FA  F  I   F C    Q    GFSY F  N  + + I + +
Sbjct: 386 FASYFAYIFGKFACKIMIQ----GFSYAFPVNLTIPVSISLLI 424


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 57  KNEWIRENQRXTVMIWKMD 113
           K +WI++N     M+W +D
Sbjct: 412 KMKWIKDNGFAGAMVWTID 430



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 57  KNEWIRENQRXTVMIWKMD 113
           K  W++E     +MIW +D
Sbjct: 842 KMAWLKEEGFGGIMIWSVD 860


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 388  HHTACLVIKAFGRIIITNMFDRFAHNFLII 299
            HH    +IK+F  I    +   F  NFLII
Sbjct: 1308 HHHLSKLIKSFNEIYGVPLLLFFGLNFLII 1337


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 493 CITEHQALVSCPNFLVIS 440
           C+   Q L  CPN LV +
Sbjct: 48  CVNGQQELYDCPNGLVFA 65


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/39 (17%), Positives = 17/39 (43%)
 Frame = -1

Query: 544 FVCKHYSQRHAFFCLICCITEHQALVSCPNFLVISVLMH 428
           F C +  + + F+C+      H   + C  +  + +L +
Sbjct: 48  FKCYNLRRIYYFYCVSITFNVHLLFLLCSGYFTVHLLFY 86


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -1

Query: 250 FSYGFTCNFCVRILIQ 203
           + Y  TC FC+ +L +
Sbjct: 497 YLYRMTCLFCINVLAE 512


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -1

Query: 253 GFSYGFTCNFC 221
           GF   FTCN C
Sbjct: 494 GFHNPFTCNMC 504


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,271
Number of Sequences: 336
Number of extensions: 4493
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)