Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0406
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    26   1.1  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   3.3  
AF437885-1|AAL84180.1|  157|Anopheles gambiae odorant binding pr...    24   5.8  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +3

Query: 399 PEWLISLKQSTTGTRTKHGVFQIF-LAELALQPLSQMFXATQPPQRRDLRRGKI 557
           P W+  L+     TRTK G  Q +     +++ + Q+    +P + RDL    I
Sbjct: 304 PAWMRRLENRINATRTKIGRMQEYQRGNSSMKVVRQIAEMVKPKELRDLTDANI 357


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 15/35 (42%), Positives = 16/35 (45%)
 Frame = +2

Query: 158 ASFETIESGLKSLETNFNSGLNQLSEGIQIVATFK 262
           A F  I  G     TNF SGL   +E   I A FK
Sbjct: 767 ADFGGISGGQGGYATNFGSGLTGGTESQLIGAIFK 801


>AF437885-1|AAL84180.1|  157|Anopheles gambiae odorant binding
           protein protein.
          Length = 157

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +2

Query: 518 ATTTTQRPAP 547
           +TTTTQRPAP
Sbjct: 26  STTTTQRPAP 35


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 723,340
Number of Sequences: 2352
Number of extensions: 14392
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)