Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0406
(750 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-1727|AAO41180.1| 312|Drosophila melanogaster CG13125-P... 33 0.55
AE014134-1726|AAF52831.2| 566|Drosophila melanogaster CG13125-P... 33 0.55
X56811-1|CAA40148.1| 1408|Drosophila melanogaster Serrate protei... 31 2.2
M35759-1|AAA28938.1| 1404|Drosophila melanogaster protein ( D.me... 31 2.2
AY128478-1|AAM75071.1| 950|Drosophila melanogaster RE42104p pro... 31 2.2
AE014297-4084|AAF56678.2| 1407|Drosophila melanogaster CG6127-PA... 31 2.2
BT011467-1|AAR99125.1| 568|Drosophila melanogaster RE23052p pro... 30 2.9
AY525769-1|AAS48651.1| 1407|Drosophila melanogaster ADAM metallo... 30 2.9
AE014297-1886|AAZ83995.1| 1407|Drosophila melanogaster CG7649-PB... 30 2.9
AE014134-2707|AAN10938.1| 2282|Drosophila melanogaster CG31817-P... 30 2.9
>AE014134-1727|AAO41180.1| 312|Drosophila melanogaster CG13125-PB,
isoform B protein.
Length = 312
Score = 32.7 bits (71), Expect = 0.55
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +2
Query: 8 RTEQINELQASLQHFQENFGAQIQKLNETLHFIKPA--DTIAAPSVEETQNKASFETIES 181
R E+I + A+L QE AQ Q+ E K D + E Q E +++
Sbjct: 70 RDEEIRDFNANLHEGQEELQAQGQRQIEDFLEYKERIFDEMRLKWRELDQRDDDLEQLQA 129
Query: 182 GLKSLETNFNSGLNQLSEGI 241
L +L NF LN+L E +
Sbjct: 130 QLDTLTANFEDSLNELWESL 149
>AE014134-1726|AAF52831.2| 566|Drosophila melanogaster CG13125-PA,
isoform A protein.
Length = 566
Score = 32.7 bits (71), Expect = 0.55
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +2
Query: 8 RTEQINELQASLQHFQENFGAQIQKLNETLHFIKPA--DTIAAPSVEETQNKASFETIES 181
R E+I + A+L QE AQ Q+ E K D + E Q E +++
Sbjct: 325 RDEEIRDFNANLHEGQEELQAQGQRQIEDFLEYKERIFDEMRLKWRELDQRDDDLEQLQA 384
Query: 182 GLKSLETNFNSGLNQLSEGI 241
L +L NF LN+L E +
Sbjct: 385 QLDTLTANFEDSLNELWESL 404
>X56811-1|CAA40148.1| 1408|Drosophila melanogaster Serrate protein
protein.
Length = 1408
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = -1
Query: 702 GCKRFRKLNGKFC---TPEKRPEGACDC*PLWFCWLLFCPWGLKKLLICDGRFCHGAGLC 532
GC + NG C P+K + C C P W LFC + + C G+ CH G C
Sbjct: 840 GCYAGQCQNGGTCMPGAPDKALQPHCRCAPGWTG--LFCAEAIDQ---CRGQPCHNGGTC 894
>M35759-1|AAA28938.1| 1404|Drosophila melanogaster protein (
D.melanogaster serrate(Ser) mRNA, complete cds. ).
Length = 1404
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = -1
Query: 702 GCKRFRKLNGKFC---TPEKRPEGACDC*PLWFCWLLFCPWGLKKLLICDGRFCHGAGLC 532
GC + NG C P+K + C C P W LFC + + C G+ CH G C
Sbjct: 836 GCYAGQCQNGGTCMPGAPDKALQPHCRCAPGWTG--LFCAEAIDQ---CRGQPCHNGGTC 890
>AY128478-1|AAM75071.1| 950|Drosophila melanogaster RE42104p
protein.
Length = 950
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = -1
Query: 702 GCKRFRKLNGKFC---TPEKRPEGACDC*PLWFCWLLFCPWGLKKLLICDGRFCHGAGLC 532
GC + NG C P+K + C C P W LFC + + C G+ CH G C
Sbjct: 613 GCYAGQCQNGGTCMPGAPDKALQPHCRCAPGWTG--LFCAEAIDQ---CRGQPCHNGGTC 667
>AE014297-4084|AAF56678.2| 1407|Drosophila melanogaster CG6127-PA
protein.
Length = 1407
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = -1
Query: 702 GCKRFRKLNGKFC---TPEKRPEGACDC*PLWFCWLLFCPWGLKKLLICDGRFCHGAGLC 532
GC + NG C P+K + C C P W LFC + + C G+ CH G C
Sbjct: 839 GCYAGQCQNGGTCMPGAPDKALQPHCRCAPGWTG--LFCAEAIDQ---CRGQPCHNGGTC 893
>BT011467-1|AAR99125.1| 568|Drosophila melanogaster RE23052p
protein.
Length = 568
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +2
Query: 356 PLIQMVTNLQNSFLSGMANLTQAINNWNSNQAWSVPNIFGGASTAAPQSDVQ 511
P++Q+ + +SG+ N + ++ + ++PN GAST AP + +Q
Sbjct: 459 PVVQLAKRSSSGSMSGVTNYARP-KSFMKSTTKTLPNGTAGASTTAPSATIQ 509
>AY525769-1|AAS48651.1| 1407|Drosophila melanogaster ADAM
metalloprotease protein.
Length = 1407
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +2
Query: 356 PLIQMVTNLQNSFLSGMANLTQAINNWNSNQAWSVPNIFGGASTAAPQSDVQ 511
P++Q+ + +SG+ N + ++ + ++PN GAST AP + +Q
Sbjct: 1298 PVVQLAKRSSSGSMSGVTNYARP-KSFMKSTTKTLPNGTAGASTTAPSATIQ 1348
>AE014297-1886|AAZ83995.1| 1407|Drosophila melanogaster CG7649-PB,
isoform B protein.
Length = 1407
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +2
Query: 356 PLIQMVTNLQNSFLSGMANLTQAINNWNSNQAWSVPNIFGGASTAAPQSDVQ 511
P++Q+ + +SG+ N + ++ + ++PN GAST AP + +Q
Sbjct: 1298 PVVQLAKRSSSGSMSGVTNYARP-KSFMKSTTKTLPNGTAGASTTAPSATIQ 1348
>AE014134-2707|AAN10938.1| 2282|Drosophila melanogaster CG31817-PA
protein.
Length = 2282
Score = 30.3 bits (65), Expect = 2.9
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Frame = +1
Query: 295 YRPCSKHNS---FYSNKH-QWPYKSFNSNGDQPPEFIPVRNG*SHSSNQQLELEPSMECS 462
YR H + Y +H +WP + S P E + V HS N+ P + +
Sbjct: 1299 YRNSHSHQTDEALYQQEHCEWPDRKILSQN--PDESVSV----DHSGNRVCSNHPRSQMT 1352
Query: 463 KYFWRS*HCSPSVRCSXRRNHHN 531
K ++++ CSP+ C R N N
Sbjct: 1353 KNYFQTAQCSPN--CPTRPNFSN 1373
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,708,799
Number of Sequences: 53049
Number of extensions: 609487
Number of successful extensions: 2038
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2038
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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