Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0406
(750 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 26 0.43
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.57
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 25 0.76
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 25 0.76
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 24 1.3
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 24 1.3
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 23 4.0
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 23 4.0
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 5.3
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 7.1
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 22 7.1
AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding prote... 21 9.3
AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding prote... 21 9.3
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 21 9.3
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 21 9.3
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 21 9.3
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 25.8 bits (54), Expect = 0.43
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 393 SCPEWLISLKQSTTGTRTKHGVFQIFLAELALQPLSQMFXATQPPQ 530
+ PE L+ LK T H + + ALQ +++ T+PP+
Sbjct: 271 NAPEGLLGLKLINAENETAHIKDSLIVLTSALQEMNKSKSITEPPK 316
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.4 bits (53), Expect = 0.57
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 487 CSPSVRCSXRRNHHNAETCAVAKSAV 564
CSPSV C R + + E A A S V
Sbjct: 16 CSPSVHCGTRPSFVSDEMIATAASVV 41
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.0 bits (52), Expect = 0.76
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 307 SKHNSFYSNKHQWPYKSFNSNGDQPPEFIPVRNG 408
+ +N+ Y+N ++ YK++ N +Q P +PV G
Sbjct: 103 NNYNNNYNNNYKKLYKNYIINIEQIPVPVPVYYG 136
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.0 bits (52), Expect = 0.76
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 307 SKHNSFYSNKHQWPYKSFNSNGDQPPEFIPVRNG 408
+ +N+ Y+N ++ YK++ N +Q P +PV G
Sbjct: 103 NNYNNNYNNNYKKLYKNYIINIEQIPVPVPVYYG 136
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced protein
75 protein.
Length = 87
Score = 24.2 bits (50), Expect = 1.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 268 RRGCS*KFQYRPCSKH 315
RR K QYRPC+K+
Sbjct: 43 RRSIQQKIQYRPCTKN 58
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 24.2 bits (50), Expect = 1.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 268 RRGCS*KFQYRPCSKH 315
RR K QYRPC+K+
Sbjct: 92 RRSIQQKIQYRPCTKN 107
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 22.6 bits (46), Expect = 4.0
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = +2
Query: 47 HFQENFGAQIQKLNETLHFIKPADTIAAPSVEETQNKAS 163
H + G LN++LHF++ + + SV E ++++
Sbjct: 20 HILDTCGRDTYALNQSLHFVRASLSNLDMSVLECADRSA 58
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 22.6 bits (46), Expect = 4.0
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = +2
Query: 47 HFQENFGAQIQKLNETLHFIKPADTIAAPSVEETQNKAS 163
H + G LN++LHF++ + + SV E ++++
Sbjct: 110 HILDTCGRDTYALNQSLHFVRASLSNLDMSVLECADRSA 148
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 213 AVLISYLKVFKLWLRSKPTERL 278
AV + L + LWL S+ TER+
Sbjct: 263 AVTMMLLTLTVLWLDSRSTERM 284
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.8 bits (44), Expect = 7.1
Identities = 6/25 (24%), Positives = 15/25 (60%)
Frame = +3
Query: 204 ISIAVLISYLKVFKLWLRSKPTERL 278
+++ +++ + + LWL TER+
Sbjct: 251 VTLTIVLMTMTLMTLWLEPSSTERM 275
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/34 (26%), Positives = 14/34 (41%)
Frame = +1
Query: 277 CS*KFQYRPCSKHNSFYSNKHQWPYKSFNSNGDQ 378
C K Y + + K+QW Y +N D+
Sbjct: 16 CQAKAHYSLRDFKANIFQVKYQWKYFDYNFGSDE 49
>AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = -3
Query: 328 CRSCCALSRGGTGTFSCSLSVGFERS 251
C CAL T CS GF+ S
Sbjct: 10 CVIYCALVHADTVAILCSQKAGFDLS 35
>AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = -3
Query: 328 CRSCCALSRGGTGTFSCSLSVGFERS 251
C CAL T CS GF+ S
Sbjct: 10 CVIYCALVHADTVAILCSQKAGFDLS 35
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 21.4 bits (43), Expect = 9.3
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = +1
Query: 343 WPYKSFNSNGDQPPEF 390
WP+K + NG+ F
Sbjct: 151 WPFKEYQMNGNNITNF 166
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 579 KLLICDGRFCHGAGL 535
K + C +FCH AG+
Sbjct: 162 KSITCALQFCHNAGI 176
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 21.4 bits (43), Expect = 9.3
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 746 SLQRVSQ*TEXQAYLVVRGLGS*MENFVHQKR 651
S+QR S TE + L S MEN + + R
Sbjct: 163 SIQRKSDITELDVSKRCKDLASFMENLLQETR 194
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,905
Number of Sequences: 438
Number of extensions: 3785
Number of successful extensions: 20
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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