Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0405
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 3e-22
SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) 87 2e-17
SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) 83 3e-16
SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) 73 2e-13
SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 8e-13
SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 7e-12
SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) 68 9e-12
SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) 67 1e-11
SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) 62 5e-10
SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38) 51 9e-07
SB_54678| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_3828| Best HMM Match : Tetraspannin (HMM E-Value=6.7e-08) 47 2e-05
SB_58139| Best HMM Match : Tetraspannin (HMM E-Value=0.2) 43 3e-04
SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06) 41 0.001
SB_32096| Best HMM Match : Tetraspannin (HMM E-Value=1.1e-13) 41 0.001
SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) 37 0.015
SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.020
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 36 0.035
SB_23414| Best HMM Match : Tetraspannin (HMM E-Value=3.8e-08) 32 0.43
SB_36075| Best HMM Match : CCD (HMM E-Value=4.3) 29 4.0
SB_9942| Best HMM Match : CCD (HMM E-Value=4.3) 29 4.0
SB_25740| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_38522| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_37997| Best HMM Match : Chordopox_A13L (HMM E-Value=2.1) 28 7.0
SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_43317| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_42994| Best HMM Match : NHL (HMM E-Value=8.4e-34) 28 9.3
SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_23937| Best HMM Match : PAN (HMM E-Value=0.12) 28 9.3
>SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 102 bits (245), Expect = 3e-22
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 5/199 (2%)
Frame = +2
Query: 74 MALEXGMSCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXX 253
MAL+ + VK L+ FN +F + GLI+ VGI A Y+ N Y
Sbjct: 1 MALQGSSNIVKILVIIFNFIFFLFGLILFGVGIWASTKLGAYVEIASVN-YATGPRVVIA 59
Query: 254 XXXXXXXXXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNL 433
CCGA KEN CM+I F FLL++ + E+ G Y +E+ + +++
Sbjct: 60 VGFIIALVAFLGCCGAWKENKCMLICFFAFLLLLLILEIVGGALAYNNKDKIENRLDKDI 119
Query: 434 NASITQYPVDKNVQKTIDIIQTDLQCCGINSPADWAD-----HGLPIPSTCCSAQEINDG 598
+I YP KN +K+I+ +QT +CCG ++ DW + +P +CC +++ G
Sbjct: 120 LKAIENYP-GKN-EKSINDMQTKFKCCGADNYTDWQSNIKMKNSSSVPDSCCKSEKAGCG 177
Query: 599 VVAACTENSTNFHSKGCLT 655
V ++ + ++KGC T
Sbjct: 178 V--GGVKDPKDIYTKGCFT 194
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Frame = +2
Query: 377 GIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGINSPADW--ADH- 547
G+A + ++D + L I Y + + +D +Q ++CCGI + DW +D+
Sbjct: 209 GLAIAVLVIQVKDELENELKNQIKSYT--GSARNAVDDMQKTVKCCGITTYEDWKSSDNL 266
Query: 548 GLP--IPSTCCSAQEINDGVVAACTENSTNFHSKGCLTKL 661
GL +P +CC+ E + G+ + T + +GC K+
Sbjct: 267 GLTDNVPDSCCTTVEKDCGM--GQRKTPTRIYKEGCYMKI 304
>SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)
Length = 642
Score = 86.6 bits (205), Expect = 2e-17
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 4/164 (2%)
Frame = +2
Query: 146 GLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXXXXXXXCCGAVKENHCMI 325
G+ ++ G AEI PY++ + +F CCGA KEN CM+
Sbjct: 378 GIALVGYGAYAEIKFGPYISISSNDFMSGSRLLIAVGCIITIIAFFG-CCGAWKENKCML 436
Query: 326 ITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDL 505
I F + LLI+ E+A + GY+ ++ + ++ +I +YP KN + ID +Q D
Sbjct: 437 ILFFILLLIVLGLEIAAAVLGYINKDKIQSDLTDDIIRNIKEYP--KNNKAAIDAMQMDF 494
Query: 506 QCCGINSPADWADHG----LPIPSTCCSAQEINDGVVAACTENS 625
+CCG P+DW +G P +CC ND + T NS
Sbjct: 495 ECCGAKGPSDWTFYGQMKYKAGPGSCCGKPN-NDACLPG-TRNS 536
>SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 252
Score = 82.6 bits (195), Expect = 3e-16
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Frame = +2
Query: 74 MALEXGMSCVKYLMFCFNLLFAITGLIILIVGI-----RAEINSYPYMNFTDENFYKXXX 238
M+ + G C+K+++F FNLLF + G I +G+ + E+ Y T YK
Sbjct: 1 MSTDWGFKCIKFMVFFFNLLFLLAGCAIFAIGVWIISSKDEVAG-DYSRLTGTINYKTAP 59
Query: 239 XXXXXXXXXXXXXXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDS 418
CCGA+KE+ CM+ T+ + IF E+ + Y+ +E +
Sbjct: 60 ILCIVIGIVTVIVAFLACCGALKESQCMLGTYFGLVTAIFCLEVTAIVLAYVYRERIEKN 119
Query: 419 VMRNLNASITQYPVDKN--VQKTIDIIQTDLQCCGINSPADWAD------HGLPIPSTCC 574
+ ++ +++ +Y + + V + ID I D +CCG DW + H +P +CC
Sbjct: 120 LHGDIRSTMNEYHLSGHDAVTRAIDEIHRDFKCCGNAQYRDWFETKWAKTHPDMVPRSCC 179
Query: 575 ---SAQEINDGVVAACTENSTNFHSKGC 649
S + N+ + +++ T + +GC
Sbjct: 180 KDPSDSKCNENI----SKDPTKIYRRGC 203
>SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)
Length = 286
Score = 73.3 bits (172), Expect = 2e-13
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Frame = +2
Query: 95 SCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTD----ENFYKXXXXXXXXXXX 262
+C+KY + N +F + G++++ GI + TD ++F
Sbjct: 22 TCIKYTLLFVNAIFCVLGILLMFDGIYIFLRLKFENELTDWFKLQSFMLYMPTLLFFTGF 81
Query: 263 XXXXXXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNAS 442
C GA+KEN + ++ +F+ + +A G+ +++ L D R L
Sbjct: 82 SLYLIVFFGCVGALKENTLFLASYGIFIFCCLIPIIAAGVLAFLQREKLVDPKAR-LEDG 140
Query: 443 ITQYPVDKNVQKTIDIIQTDLQCCGINSPADWADH-----GLPIPSTC 571
+ Y D + Q+ ID IQT +CCGI S DW + P+P+ C
Sbjct: 141 LKSYQQDSSKQEFIDFIQTRFKCCGIESYKDWQANRYFSCSSPVPTAC 188
>SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 72.5 bits (170), Expect = 3e-13
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 2/179 (1%)
Frame = +2
Query: 95 SCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXX 274
+C+KY++F N++F + G++IL++G N D Y+
Sbjct: 37 TCIKYILFFVNVVFWVFGVLILVIGSYLMTEFKNAWNL-DSILYEPSVVILIVGILLFLI 95
Query: 275 XXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY 454
C GA++EN ++ + + + + ++ GIA YM +D V+ L + Y
Sbjct: 96 ATVG-CIGALRENTILLAIYGGAVTLCLIFLVSAGIAVYMH----QDKVVEKLKDDLKHY 150
Query: 455 --PVDKNVQKTIDIIQTDLQCCGINSPADWADHGLPIPSTCCSAQEINDGVVAACTENS 625
P +N Q ID +QT+L+CCG+NS DW + I C S + GV +C + S
Sbjct: 151 RDPDKENFQFLIDRLQTNLKCCGVNSYTDWQTN---IYFNCSSPGSESCGVPFSCCKES 206
>SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 71.3 bits (167), Expect = 8e-13
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Frame = +2
Query: 290 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY--PVD 463
CCGA+KE+ C++ TF L II E+ GY+ +E+ + +++N +I Y
Sbjct: 344 CCGAIKEHRCLLATFFALLFIILAVEITGTALGYVYRNKVEEQLGKDMNDTIVSYGEKGK 403
Query: 464 KNVQKTIDIIQTDLQCCGINSPADW-------ADHGLPIPSTCCSAQEINDGVVAACTEN 622
+ + D IQ +CCGIN DW +H + +P +CC + ++ G EN
Sbjct: 404 EGITDAYDAIQKKEKCCGINGFKDWQRSYYTKGNHSI-VPDSCC--KTVSKGCGINFKEN 460
Query: 623 STNFHSKGCLTKLVVHMXD 679
+ ++KGC + + D
Sbjct: 461 --DIYTKGCFDTVKTLLKD 477
>SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 70.9 bits (166), Expect = 1e-12
Identities = 45/150 (30%), Positives = 64/150 (42%), Gaps = 3/150 (2%)
Frame = +2
Query: 98 CVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMN-FTDENFYKXXXXXXXXXXXXXXX 274
CVKY +F N++F + G +IL VGI I + D NF
Sbjct: 59 CVKYSLFTINVIFWLAGAVILAVGIFIFIEMKEEITKLADLNFQPAVIFLALGGLLFVIT 118
Query: 275 XXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY 454
C GA++EN C++ + II + G G+ LE V L +I Y
Sbjct: 119 IFG--CIGALRENRCLLTAYIWMCGIILAGMIVCGGLGFYYKDVLETKVTAQLKDAIVLY 176
Query: 455 --PVDKNVQKTIDIIQTDLQCCGINSPADW 538
P ++ ID +QT+LQCCG+ DW
Sbjct: 177 RDPTKGDLHLIIDTVQTELQCCGVQGLNDW 206
>SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 68.1 bits (159), Expect = 7e-12
Identities = 35/133 (26%), Positives = 62/133 (46%)
Frame = +2
Query: 140 ITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXXXXXXXCCGAVKENHC 319
+ G +++ VG+ A Y F + C GA++EN C
Sbjct: 16 LVGCLLVSVGLYARFEKTAYQEFFSD-ILTDPAFALIIVGGIMFILGFSGCIGALRENIC 74
Query: 320 MIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQT 499
++ FSV L IIF +LA+G+ ++ +E ++ L ++T+Y + ++Q ID +Q
Sbjct: 75 LLKFFSVVLAIIFFLQLALGVFVFVFQDKVEAVIVEKLQTAVTKYRDNADLQNLIDGVQQ 134
Query: 500 DLQCCGINSPADW 538
+ +CCG DW
Sbjct: 135 EFKCCGAKGINDW 147
>SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 280
Score = 67.7 bits (158), Expect = 9e-12
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 5/185 (2%)
Frame = +2
Query: 98 CVKYLMFCFNLLFAITGLIILIVGI-RAEINSYPYMNFTD----ENFYKXXXXXXXXXXX 262
C KY +F N++F I GL+++ VG+ + D E+ +
Sbjct: 27 CTKYTLFFINVIFFILGLLVMTVGVYMVKELKKDLKGVQDWLKLESTFHWPVVIFFVIGI 86
Query: 263 XXXXXXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNAS 442
C GA++EN C + + + + + +A G Y + D ++ L
Sbjct: 87 LMFFIGFFGCVGALRENTCFLTVYGTSVFLCLILLIACGAVAYTQK-DKVQALKERLKQD 145
Query: 443 ITQYPVDKNVQKTIDIIQTDLQCCGINSPADWADHGLPIPSTCCSAQEINDGVVAACTEN 622
+ +Y D Q ID +QT L+CCG+ S DW + C S ++ GV +C +
Sbjct: 146 LKKYLDDPLNQDLIDFMQTLLKCCGVESYKDWQANPY---FNCSSPGRMSCGVPFSCCKE 202
Query: 623 STNFH 637
S F+
Sbjct: 203 SIQFN 207
>SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 299
Score = 67.3 bits (157), Expect = 1e-11
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 2/179 (1%)
Frame = +2
Query: 95 SCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXX 274
+C+KY++F N++F + G++IL++G N D Y+
Sbjct: 37 TCIKYILFFVNVVFWVFGVLILVIGSYLMTEFKNAWNL-DSILYEPSVVILIVGILLFLI 95
Query: 275 XXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY 454
C GA++EN ++ + + + + ++ G A Y+ D V+ L + Y
Sbjct: 96 ATVG-CIGALRENTILLAIYGGAVTLCLILLVSAGTAVYIHR----DKVVAKLKDDLQHY 150
Query: 455 --PVDKNVQKTIDIIQTDLQCCGINSPADWADHGLPIPSTCCSAQEINDGVVAACTENS 625
P +N Q ID +QT+L+CCGINS DW + + C S + GV +C + S
Sbjct: 151 RDPDKENFQFLIDRLQTNLKCCGINSYNDWQTN---VYFNCSSPGSESCGVPFSCCKES 206
>SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)
Length = 211
Score = 62.1 bits (144), Expect = 5e-10
Identities = 48/175 (27%), Positives = 74/175 (42%), Gaps = 17/175 (9%)
Frame = +2
Query: 101 VKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXXXX 280
+K L+ FN+LF I G+ ++ VG AE+ ++ + Y
Sbjct: 12 LKILVVFFNVLFFIFGIALIAVGAWAEVQYGEFIEVSSVP-YATGSRLVIAVGVIIAIVS 70
Query: 281 XXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYM---KHTDLEDSVM--RNLNASI 445
C GA KEN CM+ TF V LLI+ E+A + Y K++ DSV + + +
Sbjct: 71 FFGCLGAWKENRCMLGTFFVLLLILLTLEIAAAVLAYNYRGKNSLNSDSVKVKDEIESDL 130
Query: 446 TQY-------PVDKNVQKTIDIIQTDLQCCGINSPADWA-----DHGLPIPSTCC 574
T+ V K D +Q +CCG+N DW + +P +CC
Sbjct: 131 TKALKGDYGSSGQDGVTKAFDALQEKQKCCGVNGYLDWKASKKYNGTSTVPDSCC 185
>SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)
Length = 919
Score = 51.2 bits (117), Expect = 9e-07
Identities = 26/127 (20%), Positives = 54/127 (42%)
Frame = +2
Query: 122 FNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXXXXXXXCCGA 301
FN + +G+ IL VGI + Y + + Y C
Sbjct: 22 FNTILLFSGIAILAVGIWVITSRSQYNSLLSNDNYVTVPGLMIAAGCLVIIVCVVGCVAV 81
Query: 302 VKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKT 481
+KEN +++++ + L++IF+ E+A G+ + +++ + + + +Y V K
Sbjct: 82 IKENRFILVSYLIMLVLIFILEIATGVVAVIYRSEISYELEVGIRGKMNRYGFTDAVTKA 141
Query: 482 IDIIQTD 502
ID +Q +
Sbjct: 142 IDDLQKE 148
>SB_54678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 47.6 bits (108), Expect = 1e-05
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Frame = +2
Query: 323 IITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTD 502
I+ + V L ++F E+ G + + V + + Y D ++Q ID IQ++
Sbjct: 17 IVWYMVVLAVLFTLEIIAGFLSFFFVEETRSKVSSAIKLFVVHYQDDLDLQNAIDGIQSN 76
Query: 503 LQCCGINSPADWADHGLPIPSTCCSAQEIND-GVV-AACTENSTN 631
L+CCG S DW +H CSAQ + GV + C E+ N
Sbjct: 77 LKCCGGYSYHDW-NHNKYFN---CSAQAVEACGVPHSCCVEDQIN 117
>SB_3828| Best HMM Match : Tetraspannin (HMM E-Value=6.7e-08)
Length = 542
Score = 46.8 bits (106), Expect = 2e-05
Identities = 42/177 (23%), Positives = 67/177 (37%), Gaps = 10/177 (5%)
Frame = +2
Query: 74 MALEXGMSCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXX 253
MAL+ G V + + F LF ITGL ++I G Y + + F
Sbjct: 10 MALD-GPKVVTFCILGFTALFLITGLGLIIFGSTLTTPFGEYFSLRKDAF-DTQVGLRVG 67
Query: 254 XXXXXXXXXXXXCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTD--LEDSVMR 427
GA K+N+ ++ +V +IFV E+++G + + S
Sbjct: 68 LILLILAISAVTILGAFKQNNRVLTILAVLFFVIFVTEISLGANSLTLRNEGISKSSTSA 127
Query: 428 NLNASITQYPVDKNVQKTIDIIQTDLQCCGINSPADWADHGLP--------IPSTCC 574
+ ++ Y V + ID Q CCG+ DW G +PS+CC
Sbjct: 128 SGLQLLSIYGEHPGVTEMIDNTQMGSMCCGVTDYRDWFTSGWAARQGVSNRVPSSCC 184
>SB_58139| Best HMM Match : Tetraspannin (HMM E-Value=0.2)
Length = 108
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/79 (22%), Positives = 41/79 (51%)
Frame = +2
Query: 302 VKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKT 481
+K ++ + + +++I + ++ G+ + ++ SV ++ I Y + ++Q
Sbjct: 1 MKADNVFLFQYKWVIVVIVILQVLGGLLAFAFWPNVRKSVQNQISKGIVNYRDNLDLQNI 60
Query: 482 IDIIQTDLQCCGINSPADW 538
ID IQ + +CCG +S DW
Sbjct: 61 IDGIQENFKCCGSSSINDW 79
>SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06)
Length = 187
Score = 41.1 bits (92), Expect = 0.001
Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 25/136 (18%)
Frame = +2
Query: 125 NLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXXXXXXXCCGAV 304
+L+F + GL +L VGI A I YM + + Y CCGA+
Sbjct: 39 HLVFQLMGLSVLAVGIWARIQFSDYMKLSSHD-YATAAYILIGIGFLIAIIGFIGCCGAL 97
Query: 305 KENHCMIIT-------------------------FSVFLLIIFVAELAVGIAGYMKHTDL 409
KE+ C++ T F V L ++F+ EL I GY+ +++
Sbjct: 98 KEHTCLLKTVSIKSILYGYMYAKKISLTIRIYLQFGVILGLLFLVELGTAITGYIFRSEI 157
Query: 410 EDSVMRNLNASITQYP 457
+ + L+ ++ YP
Sbjct: 158 KTGLSDGLDTALKDYP 173
>SB_32096| Best HMM Match : Tetraspannin (HMM E-Value=1.1e-13)
Length = 174
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 6/122 (4%)
Frame = +2
Query: 311 NHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTIDI 490
N ++ T V LI +A I + + S++ +L I +P + +D
Sbjct: 32 NRVLMFTGCVLALISLAGIVAAIINSKVFLIIINRSILADLKNRIKNFPGPGT--RVVDS 89
Query: 491 IQTDLQCCGINS-PADWADH-----GLPIPSTCCSAQEINDGVVAACTENSTNFHSKGCL 652
IQ LQCCG +S P DW ++ +P +CC + +T H++ C
Sbjct: 90 IQERLQCCGADSGPNDWMNNKHFLQSASVPDSCCKQEYREKDCGLGQIIANTRIHTEPCA 149
Query: 653 TK 658
+K
Sbjct: 150 SK 151
>SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)
Length = 669
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +2
Query: 131 LFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXXXXXXXCCGAVKE 310
L+ I G+ ++ VGI +++ Y + ++ + CCGAVKE
Sbjct: 164 LYQIAGIAVMSVGIWTRVSANEYASLMGQSGFTAAANIMIAAGALVMFIGFVGCCGAVKE 223
Query: 311 NHCMIITFS 337
N C ++ S
Sbjct: 224 NKCFLLLVS 232
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 89 GMSCVKYLMFCFNLLFAITGLI 154
GM C+KYL+F FN +F + +I
Sbjct: 76 GMQCMKYLLFAFNFVFWCSKII 97
>SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +2
Query: 125 NLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXXXXXXXCCGAV 304
N ++GL +L +GI ++++ + +F + Y CCGAV
Sbjct: 277 NQFALLSGLAVLGIGIWTKVDAGQFDSFLGSSGYSIPAWTMIGAGAFVTFVGFFGCCGAV 336
Query: 305 KENHCMIIT 331
KE+ CM+ T
Sbjct: 337 KESRCMLAT 345
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 35.9 bits (79), Expect = 0.035
Identities = 41/189 (21%), Positives = 69/189 (36%), Gaps = 9/189 (4%)
Frame = +2
Query: 140 ITGLIILIVGIRAEINSYPYMNFTDENFYKXXXXXXXXXXXXXXXXXXXXCCGAVKENHC 319
+ GL +L VGI A I YM + + Y CCGA+KE+ C
Sbjct: 186 LMGLSVLAVGIWARIQFSDYMKLSSHD-YATAAYILIGIGFLIAIIGFIGCCGALKEHTC 244
Query: 320 MIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQT 499
++ T T L D L+ ++ YP ++ + + +Q
Sbjct: 245 LLKTIK---------------------TGLSD----GLDTALKDYP-EQGFKDAWNDMQK 278
Query: 500 DLQCCGINSPADW---------ADHGLPIPSTCCSAQEINDGVVAACTENSTNFHSKGCL 652
+L+CCG + DW +G +P +CC ++ + + T +GC
Sbjct: 279 NLKCCGSRNYTDWFMVAWAGPNTKNG-SVPESCCKDTKVKSCNLEVLSHPETINSEQGCY 337
Query: 653 TKLVVHMXD 679
V + D
Sbjct: 338 GAAVKYFED 346
>SB_23414| Best HMM Match : Tetraspannin (HMM E-Value=3.8e-08)
Length = 357
Score = 32.3 bits (70), Expect = 0.43
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +2
Query: 350 IIFVA-ELAVGIAGYMKHTDLEDSVMRNLNAS--ITQYPVDKNVQKTIDIIQTDLQCCGI 520
+IF+ E+ V + G ++ + + +N S I Y D +++ +D IQ +L+CCG
Sbjct: 135 VIFITFEIIVMVFGIIQSSRVPTDTREIVNWSVFILNYQ-DDSIRDDLDSIQKNLKCCGF 193
Query: 521 NSPADW 538
DW
Sbjct: 194 KDYNDW 199
>SB_36075| Best HMM Match : CCD (HMM E-Value=4.3)
Length = 146
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 446 TQYPVDKNVQKTIDIIQTDLQCCGINSPADWADHGL 553
T+ PV+ Q I + DL G++ ADW+DHGL
Sbjct: 21 TEKPVEVTGQTHIGKLMLDL-VEGLDISADWSDHGL 55
>SB_9942| Best HMM Match : CCD (HMM E-Value=4.3)
Length = 146
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 446 TQYPVDKNVQKTIDIIQTDLQCCGINSPADWADHGL 553
T+ PV+ Q I + DL G++ ADW+DHGL
Sbjct: 21 TEKPVEVTGQTHIGKLMLDL-VEGLDISADWSDHGL 55
>SB_25740| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 678
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 136 CHYGIDHPDSWHQG*NKLVSLHELHR*ELLQVRSDRSHH 252
C+Y + PD+W + + SL R E++ R S+H
Sbjct: 120 CYYSLQPPDNWDKKKTSIQSLCSRERKEVITSRYQTSNH 158
>SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 733
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 186 FISALMPTIRMINPVMANRRLKQNMRYF 103
FI+ALM I +I +M + L++ M YF
Sbjct: 39 FITALMGNIILITVIMKTKSLRRTMNYF 66
>SB_38522| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 839
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -3
Query: 178 SPDANYQDDQSRNGKQKIEAKHEVLYTG---HSTFESHC 71
SP ++ RNG+ K+E+ YTG H+ +SHC
Sbjct: 22 SPLHAHKQSHCRNGEPKVESNKVQYYTGSPLHAHKQSHC 60
>SB_37997| Best HMM Match : Chordopox_A13L (HMM E-Value=2.1)
Length = 440
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 184 KLVSLHELHR*ELLQVRSDRSHHCRHYCFHCRVLRLLW 297
K+ LHE+ L++ S++ H R YC+ R L W
Sbjct: 56 KITKLHEIT--VFLRLTSNKEHKRRLYCYFLRTYVLFW 91
>SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 293 CGAVKENHCMIITFSVFLLIIFVAELAVGI 382
C + N C++ T+ F+LI+ VAE+ + +
Sbjct: 38 CALLYMNPCLLKTYFSFMLILVVAEVTIAV 67
>SB_43317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -3
Query: 199 VRIRVYFSPDANYQ---DDQSRNGKQKIEAKHEVLYTGHSTFESHCYSIKY 56
+ + +Y + ++ Y+ D+ R GK ++ +KH Y + + CY + Y
Sbjct: 56 LHLHLYDNRESEYRKRIDELEREGKWRLHSKHVTDYNKYIPARAKCYLLTY 106
>SB_42994| Best HMM Match : NHL (HMM E-Value=8.4e-34)
Length = 750
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 31 SVVIQFGGNI*LNNNGSRXWNVLCKVPHVLLQSSVCHYGIDHPD-SWHQG*NKLVSLHEL 207
+V + GN+ + + GSR W++ +PH L IDH D +W V+LH++
Sbjct: 127 AVALDMRGNVVVFHRGSRAWDLKFYMPHGLT--------IDHEDNTWITD----VALHQV 174
Query: 208 HR 213
H+
Sbjct: 175 HK 176
>SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1803
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 226 QVRSDRSHHCRHYCFHCRVLRLLWRCQREPLHDNNVFSIPLDHIR 360
QV +H C+ + V+ L W ++E + D+ + SI +D I+
Sbjct: 321 QVFEPLTHLCQEHGLAFEVVDLRWGVRQESVEDHCIVSICMDEIK 365
>SB_23937| Best HMM Match : PAN (HMM E-Value=0.12)
Length = 270
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 401 TDLEDSVMRNLNASITQYPVDKNVQKTIDII--QTDLQCCG 517
T L S++R + YP+D KTID+ TDL CG
Sbjct: 211 TALMSSMVRVCFRTNKSYPMDMGASKTIDVYCQMTDLLNCG 251
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,647,636
Number of Sequences: 59808
Number of extensions: 445313
Number of successful extensions: 1260
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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