Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0397
(665 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 23 1.7
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 2.2
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 22 3.9
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 22 5.2
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 22 5.2
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 6.9
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 6.9
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 6.9
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 6.9
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 6.9
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 6.9
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 6.9
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 21 9.1
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 278 KKLAGSKEELPSWMKSKLPG 337
K L+ +K+E+P W+ SK G
Sbjct: 527 KILSQAKQEIPEWLGSKSYG 546
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.2
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +3
Query: 444 RSRLPIISKWSQTRTSTSSKRPPRTAQTSPLTAPCTKDT 560
RS P+ + + T +S P + TSP P T T
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTT 162
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 304 FFLGASQFLFFDSLHTIRVKLKW 236
+ + Q++ FD +IR K+KW
Sbjct: 393 YAVNGDQWIGFDDEKSIRNKMKW 415
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 95 FFSIVCMYQCLCICNFLNFXA 33
++ I+ M CLC F+N A
Sbjct: 211 YYHILAMLNCLCSLWFINCTA 231
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 95 FFSIVCMYQCLCICNFLNFXA 33
++ I+ M CLC F+N A
Sbjct: 211 YYHILAMLNCLCSLWFINCTA 231
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 6.9
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +3
Query: 444 RSRLPIISKWSQTRTSTSSKRPPRTAQTSPLTAPCT 551
RS P+ + + T +S P + TSP P T
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPAT 159
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.4 bits (43), Expect = 6.9
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +3
Query: 444 RSRLPIISKWSQTRTSTSSKRPPRTAQTSPLTAPCT 551
RS P+ + + T +S P + TSP P T
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPAT 159
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 6.9
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +3
Query: 444 RSRLPIISKWSQTRTSTSSKRPPRTAQTSPLTAPCT 551
RS P+ + + T +S P + TSP P T
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPAT 159
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.4 bits (43), Expect = 6.9
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +3
Query: 444 RSRLPIISKWSQTRTSTSSKRPPRTAQTSPLTAPCT 551
RS P+ + + T +S P + TSP P T
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPAT 159
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.4 bits (43), Expect = 6.9
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +3
Query: 444 RSRLPIISKWSQTRTSTSSKRPPRTAQTSPLTAPCT 551
RS P+ + + T +S P + TSP P T
Sbjct: 80 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPAT 115
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 6.9
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +3
Query: 444 RSRLPIISKWSQTRTSTSSKRPPRTAQTSPLTAPCT 551
RS P+ + + T +S P + TSP P T
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPAT 159
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 6.9
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +3
Query: 444 RSRLPIISKWSQTRTSTSSKRPPRTAQTSPLTAPCT 551
RS P+ + + T +S P + TSP P T
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPAT 159
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 21.0 bits (42), Expect = 9.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 664 GGLSAALSTFLDLFDDDISDGL 599
GG LSTF D D+S GL
Sbjct: 441 GGKPNVLSTFWQQSDLDLSRGL 462
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,322
Number of Sequences: 336
Number of extensions: 3305
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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